RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NAIPQ13075 1403 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 GOLIM4O00461 696 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 UBE4AQ14139 1066 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 EVI5LQ96CN4 794 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 CDK19Q9BWU1 502 aa14.64□□□□□ -0.07
SYNCRIP-201ENST00000355238 PTPRCP08575 1304 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 CCDC121Q6ZUS5 278 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 CABP1Q9NZU7 370 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 HMG20BQ9P0W2 317 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 AIDAQ96BJ3 306 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 GBP6Q6ZN66 633 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 VPS18Q9P253 973 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 CNPY2Q9Y2B0 182 aa14.63□□□□□ -0.07
SYNCRIP-201ENST00000355238 MAP3K1Q13233 1512 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 SSR1P43307 286 aaKnown RBP14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 DNA2P51530 1060 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 ANKS4BQ8N8V4 417 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 ERO1AQ96HE7 468 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 MTIF2P46199 727 aaKnown RBP14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 IFI16Q16666 785 aaKnown RBP14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 ABTB2Q8N961 1025 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 ATRIPQ8WXE1 791 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 DAPK1P53355 1430 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 CTAGE9A4FU28 777 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 FBF1Q8TES7 1133 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 NUTM2GQ5VZR2 741 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 CCDC155Q8N6L0 562 aa14.62□□□□□ -0.07
SYNCRIP-201ENST00000355238 CYLC1P35663 651 aaPredicted RBP14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 PPM1EQ8WY54 764 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 SSRP1Q08945 709 aaKnown RBP14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 HOOK3Q86VS8 718 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 ZNF530Q6P9A1 599 aaPredicted RBP14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■■□□ 14.9
SYNCRIP-201ENST00000355238 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 MYRIPQ8NFW9 859 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 TMCO5BA8MYB1 307 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 SYT1P21579 422 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 CEP57Q86XR8 500 aa14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
SYNCRIP-201ENST00000355238 LARP1Q6PKG0 1096 aaKnown RBP14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 DDX12PQ92771 950 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 RAB34Q9BZG1 259 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 AKAP2Q9Y2D5 859 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 FSD2A1L4K1 749 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 GOLGA8BA8MQT2 603 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 IGSF3O75054 1194 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 ATP2C2O75185 946 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 TYRO3Q06418 890 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 CCDC6Q16204 474 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 RSRC1Q96IZ7 334 aaKnown RBP14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 F13A1P00488 732 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 MATR3P43243 847 aaKnown RBP eCLIP14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 CTCFLQ8NI51 663 aaPredicted RBP14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 KCNG4Q8TDN1 519 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 N4BP3O15049 544 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 HDXQ7Z353 690 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 ARFGAP2Q8N6H7 521 aa14.6□□□□□ -0.07
SYNCRIP-201ENST00000355238 SPAG1Q07617 926 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 PTGS1P23219 599 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 DACT1Q9NYF0 836 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 DNAJC25Q9H1X3 360 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 HYPKQ9NX55 129 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 SLC12A7Q9Y666 1083 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 SYKP43405 635 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 MPHOSPH8Q99549 860 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 STMN4Q9H169 189 aaPredicted RBP14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 ECHDC1Q9NTX5 307 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 SPG7Q9UQ90 795 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 IL16Q14005 1332 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 SUPT6HQ7KZ85 1726 aaKnown RBP14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 A0A1B0GUA9 196 aa14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 IDH1O75874 414 aaKnown RBP14.59□□□□□ -0.07
SYNCRIP-201ENST00000355238 AMPD3Q01432 767 aa14.58□□□□□ -0.07
SYNCRIP-201ENST00000355238 MRPS27Q92552 414 aaKnown RBP14.58□□□□□ -0.07
SYNCRIP-201ENST00000355238 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.07
SYNCRIP-201ENST00000355238 RPGRIP1LQ68CZ1 1315 aa14.58□□□□□ -0.07
SYNCRIP-201ENST00000355238 BTBD11A6QL63 1104 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCT2P78371 535 aaKnown RBP14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 AOPEPQ8N6M6 819 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 GNAT3A8MTJ3 354 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 ZNF213O14771 459 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 MYL6BP14649 208 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 GOLGA8AA7E2F4 631 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 RMND1Q9NWS8 449 aa14.58□□□□□ -0.08
SYNCRIP-201ENST00000355238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCDC129Q6ZRS4 1044 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCDC114Q96M63 670 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 FAM76AQ8TAV0 307 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 ATP2B2Q01814 1243 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 ARHGAP45Q92619 1136 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 AKR1B10O60218 316 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 IFIT1P09914 478 aaKnown RBP14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 SDSP20132 328 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 TMEM266Q2M3C6 531 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms