RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 BICDL1Q6ZP65 573 aa9.22□□□□□ -0.93
HTT-201ENST00000355072 HDXQ7Z353 690 aa9.22□□□□□ -0.93
HTT-201ENST00000355072 IQCGQ9H095 443 aaKnown RBP9.22□□□□□ -0.93
HTT-201ENST00000355072 RNF41Q9H4P4 317 aaPredicted RBP9.22□□□□□ -0.93
HTT-201ENST00000355072 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
HTT-201ENST00000355072 TSNARE1Q96NA8 513 aa9.22□□□□□ -0.93
HTT-201ENST00000355072 IL16Q14005 1332 aa9.21□□□□□ -0.93
HTT-201ENST00000355072 ZWINTO95229 277 aa9.21□□□□□ -0.93
HTT-201ENST00000355072 GOLGA1Q92805 767 aa9.21□□□□□ -0.93
HTT-201ENST00000355072 ZMAT2Q96NC0 199 aaKnown RBP9.21□□□□□ -0.93
HTT-201ENST00000355072 ACTN2P35609 894 aa9.21□□□□□ -0.93
HTT-201ENST00000355072 GFM2Q969S9 779 aaKnown RBP9.21□□□□□ -0.93
HTT-201ENST00000355072 MYH10P35580 1976 aa9.21□□□□□ -0.93
HTT-201ENST00000355072 ERICH4A6NGS2 130 aa9.21□□□□□ -0.93
HTT-201ENST00000355072 CCDC40Q4G0X9 1142 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 SPECC1Q5M775 1068 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 TSKSQ9UJT2 592 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 ANAPC4Q9UJX5 808 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 ZKSCAN5Q9Y2L8 839 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 EVI5O60447 810 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 KCNG4Q8TDN1 519 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 RIPK4P57078 832 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 AKAP2Q9Y2D5 859 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 SNX21Q969T3 373 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 LARSQ9P2J5 1176 aaKnown RBP9.21□□□□□ -0.94
HTT-201ENST00000355072 ATP8B1O43520 1251 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 LMAN1P49257 510 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 VCX3AQ9NNX9 186 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 MTUS1Q9ULD2 1270 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 SYCE3A1L190 88 aa9.21□□□□□ -0.94
HTT-201ENST00000355072 KRT18P05783 430 aaKnown RBP9.21□□□□□ -0.94
HTT-201ENST00000355072 HSP90AA5PQ58FG0 334 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 TAOK1Q7L7X3 1001 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 DNMBPQ6XZF7 1577 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 CADPSQ9ULU8 1353 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 CCDC65Q8IXS2 484 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 SOS1Q07889 1333 aaPredicted RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 UTP14CQ5TAP6 766 aaKnown RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 UTP14AQ9BVJ6 771 aaKnown RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 MED4Q9NPJ6 270 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 GIGYF1O75420 1035 aaPredicted RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 NBPF11Q86T75 865 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 DNAJC8O75937 253 aaPredicted RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 LACTBP83111 547 aaPredicted RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 A0A087WZG4 1122 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 FIBPO43427 364 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 KIAA0753Q2KHM9 967 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 VIMP08670 466 aaKnown RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 ERCC3P19447 782 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 CNGA4Q8IV77 575 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 FAN1Q9Y2M0 1017 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 NUP88Q99567 741 aaPredicted RBP9.2□□□□□ -0.94
HTT-201ENST00000355072 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 FSD1Q9BTV5 496 aa9.2□□□□□ -0.94
HTT-201ENST00000355072 CSRNP2Q9H175 543 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 TRAF1Q13077 416 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
HTT-201ENST00000355072 ITGB1BP2Q9UKP3 347 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 PLCD3Q8N3E9 789 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 POLE3Q9NRF9 147 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 CTAGE15A4D2H0 777 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 CTAGE8P0CG41 777 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 TRPC3Q13507 836 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 CTAGE6Q86UF2 777 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 CTAGE4Q8IX94 777 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 GBP7Q8N8V2 638 aaPredicted RBP9.19□□□□□ -0.94
HTT-201ENST00000355072 ANKRD62A6NC57 917 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 STMN2Q93045 179 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 CCDC69A6NI79 296 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 BLOC1S2Q6QNY1 142 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 ASXL1Q8IXJ9 1541 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 CFAP58Q5T655 872 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 ZNF365Q70YC5 407 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 CECR2Q9BXF3 1484 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 MTMR3Q13615 1198 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 RUFY4Q6ZNE9 571 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 SLU7O95391 586 aaKnown RBP9.19□□□□□ -0.94
HTT-201ENST00000355072 USP5P45974 858 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 PLCB1Q9NQ66 1216 aa9.19□□□□□ -0.94
HTT-201ENST00000355072 SPATS2LQ9NUQ6 558 aaKnown RBP9.19□□□□□ -0.94
HTT-201ENST00000355072 BICDL2A1A5D9 508 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 FCHSD2O94868 740 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 CCDC178Q5BJE1 867 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 GOLGA8QA0A0J9YX86 632 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 GOLGA8OA6NCC3 632 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 GOLGA8NF8WBI6 632 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 HAUS2Q9NVX0 235 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 TRIM35Q9UPQ4 493 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 ACTN4O43707 911 aaKnown RBP9.18□□□□□ -0.94
HTT-201ENST00000355072 DEUP1Q05D60 604 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 NBPF8Q3BBV2 869 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
HTT-201ENST00000355072 MAP2K2P36507 400 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 Q9H521 79 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 RPRD2Q5VT52 1461 aaKnown RBP9.18□□□□□ -0.94
HTT-201ENST00000355072 WASHC4Q2M389 1173 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 GSTTP1A0A1W2PQM5 241 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 CYLC1P35663 651 aaPredicted RBP9.18□□□□□ -0.94
HTT-201ENST00000355072 PIBF1Q8WXW3 757 aa9.18□□□□□ -0.94
HTT-201ENST00000355072 STRN4Q9NRL3 753 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms