RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CTAGE9A4FU28 777 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 GCOM1H8Y6P7 765 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 STX6O43752 255 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 MYZAPP0CAP1 466 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 IFFO1Q0D2I5 559 aa5.81□□□□□ -1.48
SKP1-202ENST00000353411 HDAC1Q13547 482 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 MORC2Q9Y6X9 1032 aaPredicted RBP5.81□□□□□ -1.48
SKP1-202ENST00000353411 CXorf56Q9H5V9 222 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 ODF2LQ9ULJ1 636 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 GNAI1P63096 354 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 DUSP27Q5VZP5 1158 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 SLFNL1Q499Z3 407 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 FBF1Q8TES7 1133 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 INTS4Q96HW7 963 aaKnown RBP5.8□□□□□ -1.48
SKP1-202ENST00000353411 RAI14Q9P0K7 980 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 MYOM3Q5VTT5 1437 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 RUSC2Q8N2Y8 1516 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 NDUFAB1O14561 156 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 PDCD2Q16342 344 aaPredicted RBP5.8□□□□□ -1.48
SKP1-202ENST00000353411 ANO6Q4KMQ2 910 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 USP48Q86UV5 1035 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 DZIP1Q86YF9 867 aaKnown RBP5.8□□□□□ -1.48
SKP1-202ENST00000353411 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
SKP1-202ENST00000353411 CCDC69A6NI79 296 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 TBC1D9Q6ZT07 1266 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 LUC7L2Q9Y383 392 aaKnown RBP5.8□□□□□ -1.48
SKP1-202ENST00000353411 MAPKBP1O60336 1514 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 NCOA2Q15596 1464 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 SMARCA5O60264 1052 aaPredicted RBP5.8□□□□□ -1.48
SKP1-202ENST00000353411 IGHDP01880 384 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 PAFAH1B1P43034 410 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 SLMAPQ14BN4 828 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 GIMAP6Q6P9H5 292 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 ERBB4Q15303 1308 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 ATP2B1P20020 1258 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 LACTBP83111 547 aaPredicted RBP5.8□□□□□ -1.48
SKP1-202ENST00000353411 IMPACTQ9P2X3 320 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 MYO9BQ13459 2157 aa5.8□□□□□ -1.48
SKP1-202ENST00000353411 ATP11AP98196 1134 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 LRRC23Q53EV4 343 aaPredicted RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 CCDC158Q5M9N0 1113 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 ZNF365Q70YC5 407 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 ATRIPQ8WXE1 791 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 TIAM1Q13009 1591 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 CCDC82Q8N4S0 544 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 FBXO18Q8NFZ0 1043 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 IFT74Q96LB3 600 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 GRIN2AQ12879 1464 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 ZSCAN22P10073 491 aaPredicted RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 PPP2R3AQ06190 1150 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 CKAP2LQ8IYA6 745 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 MPHOSPH8Q99549 860 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 PPP1R12AO14974 1030 aaPredicted RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 TYRO3Q06418 890 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 DAAM2Q86T65 1068 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 KRI1Q8N9T8 703 aaKnown RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 NOB1Q9ULX3 412 aaKnown RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 EFCAB8A8MWE9 144 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 GUCY2CP25092 1073 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 ARMC2Q8NEN0 867 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 N4BP2L2Q92802 583 aaPredicted RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 FEZ2Q9UHY8 353 aaPredicted RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 FAM71BQ8TC56 605 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 TSC1Q92574 1164 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 CFAP74Q9C0B2 1584 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 IFIT2P09913 472 aaKnown RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 ZBTB17Q13105 803 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 SNCBQ16143 134 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 TSNAXIP1Q2TAA8 658 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 ZMAT2Q96NC0 199 aaKnown RBP5.79□□□□□ -1.48
SKP1-202ENST00000353411 LIMCH1Q9UPQ0 1083 aa5.79□□□□□ -1.48
SKP1-202ENST00000353411 GOLGA6CA6NDK9 693 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 DCAF8L1A6NGE4 600 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 GOLGA6DP0CG33 693 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 SEPT7Q16181 437 aaKnown RBP5.78□□□□□ -1.48
SKP1-202ENST00000353411 ATP2B3Q16720 1220 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 CYB5RLQ6IPT4 315 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 CEP128Q6ZU80 1094 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 ANTXR1Q9H6X2 564 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 GOLGA6AQ9NYA3 693 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 DONSONQ9NYP3 566 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 GOLGA4Q13439 2230 aaKnown RBP5.78□□□□□ -1.48
SKP1-202ENST00000353411 MYCNP04198 464 aaPredicted RBP5.78□□□□□ -1.48
SKP1-202ENST00000353411 FAM69CQ0P6D2 419 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 E2F4Q16254 413 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 C6orf163Q5TEZ5 329 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 PDRG1Q9NUG6 133 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 CAPN7Q9Y6W3 813 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 GBP1P32455 592 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 KLHL10Q6JEL2 608 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 LMBRD1Q9NUN5 540 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 IQGAP2Q13576 1575 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 SOX12O15370 315 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 PPFIA1Q13136 1202 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 TCP11L2Q8N4U5 519 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 RARSP54136 660 aaKnown RBP5.78□□□□□ -1.48
SKP1-202ENST00000353411 CCDC40Q4G0X9 1142 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 GAS2L3Q86XJ1 694 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms