RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 NME9Q86XW9 330 aa18■□□□□ 0.47
PTBP1-201ENST00000349038 GJB2P29033 226 aa18■□□□□ 0.47
PTBP1-201ENST00000349038 TYRO3Q06418 890 aa18■□□□□ 0.47
PTBP1-201ENST00000349038 MCM10Q7L590 875 aa18■□□□□ 0.47
PTBP1-201ENST00000349038 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
PTBP1-201ENST00000349038 ZCCHC17Q9NP64 241 aaKnown RBP18■□□□□ 0.47
PTBP1-201ENST00000349038 CASTP20810 708 aaKnown RBP17.99■□□□□ 0.47
PTBP1-201ENST00000349038 AK2P54819 239 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 ZSCAN25Q6NSZ9 544 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 DNAJC2Q99543 621 aaKnown RBP17.99■□□□□ 0.47
PTBP1-201ENST00000349038 GOLGA6L19H0YKK7 550 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 LARGE1O95461 756 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 GYS2P54840 703 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 CCDC144BQ3MJ40 725 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 CCDC144CPQ8IYA2 1237 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 OSBPL3Q9H4L5 887 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 CALCOCO1Q9P1Z2 691 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 ZRANB1Q9UGI0 708 aa17.99■□□□□ 0.47
PTBP1-201ENST00000349038 CTIFO43310 598 aaKnown RBP17.98■□□□□ 0.47
PTBP1-201ENST00000349038 F13A1P00488 732 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
PTBP1-201ENST00000349038 MLECQ14165 292 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 CBX8Q9HC52 389 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 ZNF165P49910 485 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 IRX3P78415 501 aaPredicted RBP17.98■□□□□ 0.47
PTBP1-201ENST00000349038 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
PTBP1-201ENST00000349038 WAPLQ7Z5K2 1190 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 TCHHQ07283 1943 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 PTPRCP08575 1304 aa17.98■□□□□ 0.47
PTBP1-201ENST00000349038 CCDC34Q96HJ3 373 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 EPC1Q9H2F5 836 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 KIAA0232Q92628 1395 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 BECN2A8MW95 431 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 MCM2P49736 904 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 HAP1P54257 671 aaPredicted RBP17.97■□□□□ 0.47
PTBP1-201ENST00000349038 FAM200AQ8TCP9 573 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 CHL1O00533 1208 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 SKILP12757 684 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 RSPH14Q9UHP6 348 aa17.97■□□□□ 0.47
PTBP1-201ENST00000349038 HMMRO75330 724 aa17.96■□□□□ 0.47
PTBP1-201ENST00000349038 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
PTBP1-201ENST00000349038 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
PTBP1-201ENST00000349038 ANKRD65E5RJM6 399 aa17.96■□□□□ 0.47
PTBP1-201ENST00000349038 TAF7LQ5H9L4 462 aa17.96■□□□□ 0.47
PTBP1-201ENST00000349038 CPS1P31327 1500 aa17.96■□□□□ 0.46
PTBP1-201ENST00000349038 SETD1AO15047 1707 aaKnown RBP17.95■□□□□ 0.46
PTBP1-201ENST00000349038 ZNF397Q8NF99 534 aaPredicted RBP17.95■□□□□ 0.46
PTBP1-201ENST00000349038 TRIM66O15016 1216 aa17.95■□□□□ 0.46
PTBP1-201ENST00000349038 CHMLP26374 656 aa17.95■□□□□ 0.46
PTBP1-201ENST00000349038 CUL4AQ13619 759 aa17.95■□□□□ 0.46
PTBP1-201ENST00000349038 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
PTBP1-201ENST00000349038 LRRN4CLQ8ND94 238 aa17.95■□□□□ 0.46
PTBP1-201ENST00000349038 FER1L4A9Z1Z3 1794 aa17.95■□□□□ 0.46
PTBP1-201ENST00000349038 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
PTBP1-201ENST00000349038 PTPN21Q16825 1174 aa17.95■□□□□ 0.46
PTBP1-201ENST00000349038 RASEFQ8IZ41 740 aa17.95■□□□□ 0.46
PTBP1-201ENST00000349038 G2E3Q7L622 706 aa17.94■□□□□ 0.46
PTBP1-201ENST00000349038 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
PTBP1-201ENST00000349038 ATP6V1DQ9Y5K8 247 aa17.94■□□□□ 0.46
PTBP1-201ENST00000349038 FBXO31Q5XUX0 539 aaPredicted RBP17.93■□□□□ 0.46
PTBP1-201ENST00000349038 MON2Q7Z3U7 1717 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
PTBP1-201ENST00000349038 KRBA2Q6ZNG9 492 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 COG3Q96JB2 828 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 STAG3Q9UJ98 1225 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 MRVI1Q9Y6F6 885 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 SYT10Q6XYQ8 523 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 TTC6Q86TZ1 520 aa17.93■□□□□ 0.46
PTBP1-201ENST00000349038 WASLO00401 505 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-201ENST00000349038 TPM3P06753 285 aa17.92■□□□□ 0.46
PTBP1-201ENST00000349038 OS9Q13438 667 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-201ENST00000349038 LRRCC1Q9C099 1032 aa17.92■□□□□ 0.46
PTBP1-201ENST00000349038 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-201ENST00000349038 MORC2Q9Y6X9 1032 aaPredicted RBP17.92■□□□□ 0.46
PTBP1-201ENST00000349038 SALL3Q9BXA9 1300 aa17.92■□□□□ 0.46
PTBP1-201ENST00000349038 RAD51AP2Q09MP3 1159 aa17.92■□□□□ 0.46
PTBP1-201ENST00000349038 ARHGAP29Q52LW3 1261 aa17.92■□□□□ 0.46
PTBP1-201ENST00000349038 PRPF40BQ6NWY9 871 aaKnown RBP17.91■□□□□ 0.46
PTBP1-201ENST00000349038 GPATCH11Q8N954 259 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 PNMA6EA0A0J9YXQ4 647 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 C3P01024 1663 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 ZNF75DP51815 510 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 IL17RAQ96F46 866 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 INTS4Q96HW7 963 aaKnown RBP17.91■□□□□ 0.46
PTBP1-201ENST00000349038 SPATA32Q96LK8 384 aa17.91■□□□□ 0.46
PTBP1-201ENST00000349038 RUFY3Q7L099 469 aa17.9■□□□□ 0.46
PTBP1-201ENST00000349038 ISM2Q6H9L7 571 aa17.9■□□□□ 0.46
PTBP1-201ENST00000349038 RIMS1Q86UR5 1692 aaKnown RBP17.89■□□□□ 0.46
PTBP1-201ENST00000349038 CCDC69A6NI79 296 aa17.89■□□□□ 0.46
PTBP1-201ENST00000349038 ST5P78524 1137 aa17.89■□□□□ 0.46
PTBP1-201ENST00000349038 CDC37L1Q7L3B6 337 aa17.89■□□□□ 0.46
PTBP1-201ENST00000349038 LIMCH1Q9UPQ0 1083 aa17.89■□□□□ 0.45
PTBP1-201ENST00000349038 CRB1P82279 1406 aa17.89■□□□□ 0.45
PTBP1-201ENST00000349038 SURF6O75683 361 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms