RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 LSG1Q9H089 658 aaKnown RBP17.51■□□□□ 0.39
SMTN-202ENST00000347557 TTC12Q9H892 705 aaPredicted RBP17.51■□□□□ 0.39
SMTN-202ENST00000347557 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
SMTN-202ENST00000347557 ZNF500O60304 480 aaPredicted RBP17.5■□□□□ 0.39
SMTN-202ENST00000347557 DNM1Q05193 864 aaKnown RBP17.5■□□□□ 0.39
SMTN-202ENST00000347557 GJB2P29033 226 aa17.5■□□□□ 0.39
SMTN-202ENST00000347557 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
SMTN-202ENST00000347557 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.5■□□□□ 0.39
SMTN-202ENST00000347557 AACSQ86V21 672 aa17.5■□□□□ 0.39
SMTN-202ENST00000347557 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
SMTN-202ENST00000347557 SETD1BQ9UPS6 1966 aaKnown RBP17.49■□□□□ 0.39
SMTN-202ENST00000347557 EIF4A1P60842 406 aaKnown RBP17.49■□□□□ 0.39
SMTN-202ENST00000347557 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
SMTN-202ENST00000347557 PRAMEF22A3QJZ6 481 aa17.49■□□□□ 0.39
SMTN-202ENST00000347557 ADCY5O95622 1261 aa17.49■□□□□ 0.39
SMTN-202ENST00000347557 BEND3Q5T5X7 828 aa17.49■□□□□ 0.39
SMTN-202ENST00000347557 KIAA2012Q0VF49 1180 aa17.48■□□□□ 0.39
SMTN-202ENST00000347557 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
SMTN-202ENST00000347557 FAM173BQ6P4H8 233 aa17.48■□□□□ 0.39
SMTN-202ENST00000347557 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
SMTN-202ENST00000347557 POLA2Q14181 598 aa17.48■□□□□ 0.39
SMTN-202ENST00000347557 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
SMTN-202ENST00000347557 RPAP1Q9BWH6 1393 aaPredicted RBP17.47■□□□□ 0.39
SMTN-202ENST00000347557 PLEKHG1Q9ULL1 1385 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 GLRX3O76003 335 aaKnown RBP17.47■□□□□ 0.39
SMTN-202ENST00000347557 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 PROSER3Q2NL68 480 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 F13A1P00488 732 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 SPC24Q8NBT2 197 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 STK3Q13188 491 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 RUFY2Q8WXA3 655 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 TSC1Q92574 1164 aa17.47■□□□□ 0.39
SMTN-202ENST00000347557 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
SMTN-202ENST00000347557 PAXIP1Q6ZW49 1069 aaPredicted RBP17.46■□□□□ 0.39
SMTN-202ENST00000347557 CYP46A1Q9Y6A2 500 aa17.46■□□□□ 0.39
SMTN-202ENST00000347557 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
SMTN-202ENST00000347557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.46■□□□□ 0.39
SMTN-202ENST00000347557 PSME1Q06323 249 aa17.46■□□□□ 0.39
SMTN-202ENST00000347557 CAMK4Q16566 473 aa17.46■□□□□ 0.39
SMTN-202ENST00000347557 FAM227BQ96M60 508 aa17.46■□□□□ 0.39
SMTN-202ENST00000347557 BOLA2Q9H3K6 86 aa17.46■□□□□ 0.39
SMTN-202ENST00000347557 AOX1Q06278 1338 aa17.46■□□□□ 0.38
SMTN-202ENST00000347557 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
SMTN-202ENST00000347557 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
SMTN-202ENST00000347557 TTC14Q96N46 770 aa17.45■□□□□ 0.38
SMTN-202ENST00000347557 ECHDC1Q9NTX5 307 aa17.45■□□□□ 0.38
SMTN-202ENST00000347557 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
SMTN-202ENST00000347557 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
SMTN-202ENST00000347557 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
SMTN-202ENST00000347557 UBE2HP62256 183 aa17.45■□□□□ 0.38
SMTN-202ENST00000347557 HYPKQ9NX55 129 aa17.44■□□□□ 0.38
SMTN-202ENST00000347557 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
SMTN-202ENST00000347557 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
SMTN-202ENST00000347557 C1orf141Q5JVX7 400 aa17.44■□□□□ 0.38
SMTN-202ENST00000347557 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
SMTN-202ENST00000347557 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
SMTN-202ENST00000347557 G3BP1Q13283 466 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMTN-202ENST00000347557 LARP1BQ659C4 914 aaKnown RBP17.43■□□□□ 0.38
SMTN-202ENST00000347557 RBM8AQ9Y5S9 174 aaKnown RBP17.43■□□□□ 0.38
SMTN-202ENST00000347557 FSD1Q9BTV5 496 aa17.43■□□□□ 0.38
SMTN-202ENST00000347557 TFIP11Q9UBB9 837 aaKnown RBP17.43■□□□□ 0.38
SMTN-202ENST00000347557 MYL6BP14649 208 aa17.42■□□□□ 0.38
SMTN-202ENST00000347557 MCM5P33992 734 aa17.42■□□□□ 0.38
SMTN-202ENST00000347557 ME3Q16798 604 aa17.42■□□□□ 0.38
SMTN-202ENST00000347557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.42■□□□□ 0.38
SMTN-202ENST00000347557 DBF4Q9UBU7 674 aaPredicted RBP17.42■□□□□ 0.38
SMTN-202ENST00000347557 PIP4K2AP48426 406 aaPredicted RBP17.41■□□□□ 0.38
SMTN-202ENST00000347557 FOSBP53539 338 aa17.41■□□□□ 0.38
SMTN-202ENST00000347557 NMIQ13287 307 aaPredicted RBP17.41■□□□□ 0.38
SMTN-202ENST00000347557 SASS6Q6UVJ0 657 aa17.41■□□□□ 0.38
SMTN-202ENST00000347557 EDC3Q96F86 508 aaKnown RBP17.41■□□□□ 0.38
SMTN-202ENST00000347557 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
SMTN-202ENST00000347557 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
SMTN-202ENST00000347557 MTMR6Q9Y217 621 aa17.41■□□□□ 0.38
SMTN-202ENST00000347557 NDUFB9Q9Y6M9 179 aa17.41■□□□□ 0.38
SMTN-202ENST00000347557 TCHHQ07283 1943 aa17.41■□□□□ 0.38
SMTN-202ENST00000347557 THEMISQ8N1K5 641 aaPredicted RBP17.41■□□□□ 0.38
SMTN-202ENST00000347557 FAM184AQ8NB25 1140 aa17.41■□□□□ 0.38
SMTN-202ENST00000347557 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
SMTN-202ENST00000347557 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
SMTN-202ENST00000347557 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
SMTN-202ENST00000347557 IP6K1Q92551 441 aa17.4■□□□□ 0.38
SMTN-202ENST00000347557 TPCN1Q9ULQ1 816 aa17.4■□□□□ 0.38
SMTN-202ENST00000347557 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
SMTN-202ENST00000347557 CREB3L3Q68CJ9 461 aa17.39■□□□□ 0.37
SMTN-202ENST00000347557 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
SMTN-202ENST00000347557 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
SMTN-202ENST00000347557 SUCLG2Q96I99 432 aa17.39■□□□□ 0.37
SMTN-202ENST00000347557 BICC1Q9H694 974 aaKnown RBP17.39■□□□□ 0.37
SMTN-202ENST00000347557 ADCY9O60503 1353 aa17.39■□□□□ 0.37
SMTN-202ENST00000347557 NOLC1Q14978 699 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMTN-202ENST00000347557 TTC41PQ6P2S7 1318 aa17.39■□□□□ 0.37
SMTN-202ENST00000347557 TAF6LQ9Y6J9 622 aa17.38■□□□□ 0.37
SMTN-202ENST00000347557 PPFIA3O75145 1194 aa17.38■□□□□ 0.37
SMTN-202ENST00000347557 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
SMTN-202ENST00000347557 EVI5LQ96CN4 794 aa17.38■□□□□ 0.37
SMTN-202ENST00000347557 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
SMTN-202ENST00000347557 KDM4AO75164 1064 aa17.38■□□□□ 0.37
SMTN-202ENST00000347557 VPS53Q5VIR6 699 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms