RNA–Protein interactions for RNA: ENST00000346618.7

E2F3-201, Transcript of E2F transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene E2F3, Length 4,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-201ENST00000346618 GEMIN8Q9NWZ8 242 aaKnown RBP17.21■□□□□ 0.35
E2F3-201ENST00000346618 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.21■□□□□ 0.355e-7■■■■□ 20.1
E2F3-201ENST00000346618 EXOC4Q96A65 974 aa17.21■□□□□ 0.34
E2F3-201ENST00000346618 NUCKS1Q9H1E3 243 aaKnown RBP17.21■□□□□ 0.34
E2F3-201ENST00000346618 ATAD2Q6PL18 1390 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 GOLGA6CA6NDK9 693 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 GOLGA6DP0CG33 693 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 GOLGA6AQ9NYA3 693 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 ANKRD62A6NC57 917 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
E2F3-201ENST00000346618 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
E2F3-201ENST00000346618 TCHPQ9BT92 498 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 CUX1P39880 1505 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 F13A1P00488 732 aa17.2■□□□□ 0.34
E2F3-201ENST00000346618 DDX41Q9UJV9 622 aaKnown RBP17.2■□□□□ 0.34
E2F3-201ENST00000346618 NPHP3Q7Z494 1330 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 PEX19P40855 299 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 LIG3P49916 1009 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 IFT74Q96LB3 600 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 NUP88Q99567 741 aaPredicted RBP17.19■□□□□ 0.34
E2F3-201ENST00000346618 ODF2LQ9ULJ1 636 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 ALDH1L2Q3SY69 923 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 CPLX3Q8WVH0 158 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 ERBB4Q15303 1308 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 RHOXF2BP0C7M4 288 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 BIRC2Q13490 618 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 ATP2B3Q16720 1220 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 RHOXF2Q9BQY4 288 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
E2F3-201ENST00000346618 ZNF75DP51815 510 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 CCDC38Q502W7 563 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 PPFIBP2Q8ND30 876 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 JADE2Q9NQC1 790 aa17.19■□□□□ 0.34
E2F3-201ENST00000346618 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
E2F3-201ENST00000346618 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
E2F3-201ENST00000346618 CCDC129Q6ZRS4 1044 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 CEP120Q8N960 986 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 CABS1Q96KC9 395 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 PUF60Q9UHX1 559 aaKnown RBP17.18■□□□□ 0.34
E2F3-201ENST00000346618 ATP11AP98196 1134 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 RAD51AP2Q09MP3 1159 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 ERCC6LQ2NKX8 1250 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 ZBTB9Q96C00 473 aa17.18■□□□□ 0.34
E2F3-201ENST00000346618 SATB1Q01826 763 aa17.17■□□□□ 0.34
E2F3-201ENST00000346618 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
E2F3-201ENST00000346618 TSNAXIP1Q2TAA8 658 aa17.17■□□□□ 0.34
E2F3-201ENST00000346618 AOPEPQ8N6M6 819 aa17.17■□□□□ 0.34
E2F3-201ENST00000346618 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
E2F3-201ENST00000346618 CDKL5O76039 1030 aa17.17■□□□□ 0.34
E2F3-201ENST00000346618 SEPT14Q6ZU15 432 aa17.17■□□□□ 0.34
E2F3-201ENST00000346618 TACO1Q9BSH4 297 aaKnown RBP17.17■□□□□ 0.34
E2F3-201ENST00000346618 FAM184BQ9ULE4 1060 aa17.17■□□□□ 0.34
E2F3-201ENST00000346618 ANKRD18BA2A2Z9 1011 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
E2F3-201ENST00000346618 CEP63Q96MT8 703 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 TMEM63CQ9P1W3 806 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.16■□□□□ 0.342e-10■■■■□ 19.3
E2F3-201ENST00000346618 SSH1Q8WYL5 1049 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 IMPACTQ9P2X3 320 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 PRDM4Q9UKN5 801 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 CCDC160A6NGH7 325 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 PPFIA1Q13136 1202 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 SAMD15Q9P1V8 674 aa17.16■□□□□ 0.34
E2F3-201ENST00000346618 PPFIA3O75145 1194 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 TBC1D31Q96DN5 1066 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 MED4Q9NPJ6 270 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 VAV2P52735 878 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 CCDC158Q5M9N0 1113 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 LUC7L3O95232 432 aaKnown RBP17.15■□□□□ 0.34
E2F3-201ENST00000346618 CFAP58Q5T655 872 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
E2F3-201ENST00000346618 TRIM6Q9C030 488 aaPredicted RBP17.15■□□□□ 0.34
E2F3-201ENST00000346618 EFCAB8A8MWE9 144 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 BIN1O00499 593 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 FBXO18Q8NFZ0 1043 aa17.15■□□□□ 0.34
E2F3-201ENST00000346618 ZGPATQ8N5A5 531 aaKnown RBP17.14■□□□□ 0.33
E2F3-201ENST00000346618 STIM2Q9P246 746 aa17.14■□□□□ 0.33
E2F3-201ENST00000346618 RAB11FIP3O75154 756 aa17.14■□□□□ 0.33
E2F3-201ENST00000346618 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.33
E2F3-201ENST00000346618 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.33
E2F3-201ENST00000346618 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
E2F3-201ENST00000346618 ZNF365Q70YC5 407 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 FAM71BQ8TC56 605 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 TRIM27P14373 513 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 MAP3K9P80192 1104 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 SART3Q15020 963 aaKnown RBP17.13■□□□□ 0.33
E2F3-201ENST00000346618 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 CCDC155Q8N6L0 562 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 TAOK3Q9H2K8 898 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
E2F3-201ENST00000346618 CACNA2D3Q8IZS8 1091 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 STMN4Q9H169 189 aaPredicted RBP17.13■□□□□ 0.33
E2F3-201ENST00000346618 A0A0G2JS52 829 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 SNCBQ16143 134 aa17.13■□□□□ 0.33
E2F3-201ENST00000346618 TRIM22Q8IYM9 498 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms