RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 AFDNP55196 1824 aaKnown RBP26.75■■□□□ 1.87
TSPAN3-202ENST00000346495 UTYO14607 1347 aa26.75■■□□□ 1.87
TSPAN3-202ENST00000346495 IGKV5-2P06315 115 aa26.75■■□□□ 1.87
TSPAN3-202ENST00000346495 NEURL1BA8MQ27 555 aa26.74■■□□□ 1.87
TSPAN3-202ENST00000346495 GRM8O00222 908 aa26.74■■□□□ 1.87
TSPAN3-202ENST00000346495 SLC4A9Q96Q91 983 aa26.74■■□□□ 1.87
TSPAN3-202ENST00000346495 ZBTB47Q9UFB7 747 aaPredicted RBP26.74■■□□□ 1.87
TSPAN3-202ENST00000346495 SMARCC1Q92922 1105 aaPredicted RBP26.72■■□□□ 1.87
TSPAN3-202ENST00000346495 CICQ96RK0 1608 aaPredicted RBP26.72■■□□□ 1.87
TSPAN3-202ENST00000346495 PNMA6EA0A0J9YXQ4 647 aa26.72■■□□□ 1.87
TSPAN3-202ENST00000346495 CYP19A1P11511 503 aaPredicted RBP26.72■■□□□ 1.87
TSPAN3-202ENST00000346495 TTLL7Q6ZT98 887 aa26.72■■□□□ 1.87
TSPAN3-202ENST00000346495 GCKRQ14397 625 aa26.7■■□□□ 1.86
TSPAN3-202ENST00000346495 SSH3Q8TE77 659 aa26.7■■□□□ 1.86
TSPAN3-202ENST00000346495 ONECUT3O60422 494 aaPredicted RBP26.69■■□□□ 1.86
TSPAN3-202ENST00000346495 C8orf34Q49A92 452 aa26.69■■□□□ 1.86
TSPAN3-202ENST00000346495 POLA2Q14181 598 aa26.68■■□□□ 1.86
TSPAN3-202ENST00000346495 PPP1R42Q7Z4L9 355 aa26.68■■□□□ 1.86
TSPAN3-202ENST00000346495 MTX1Q13505 466 aa26.68■■□□□ 1.86
TSPAN3-202ENST00000346495 PALLDQ8WX93 1383 aa26.67■■□□□ 1.86
TSPAN3-202ENST00000346495 KCNQ2O43526 872 aa26.67■■□□□ 1.86
TSPAN3-202ENST00000346495 ZNF831Q5JPB2 1677 aa26.67■■□□□ 1.86
TSPAN3-202ENST00000346495 LOC102724428A0A0B4J2F2 783 aa26.66■■□□□ 1.86
TSPAN3-202ENST00000346495 SIK1P57059 783 aa26.66■■□□□ 1.86
TSPAN3-202ENST00000346495 KIF6Q6ZMV9 814 aa26.66■■□□□ 1.86
TSPAN3-202ENST00000346495 NHSQ6T4R5 1651 aa26.66■■□□□ 1.86
TSPAN3-202ENST00000346495 SRGAP3O43295 1099 aa26.65■■□□□ 1.86
TSPAN3-202ENST00000346495 ATP6V1AP38606 617 aa26.65■■□□□ 1.86
TSPAN3-202ENST00000346495 SUCLG2Q96I99 432 aa26.65■■□□□ 1.86
TSPAN3-202ENST00000346495 ZBTB3Q9H5J0 574 aa26.65■■□□□ 1.86
TSPAN3-202ENST00000346495 QTRT2Q9H974 415 aaKnown RBP26.65■■□□□ 1.86
TSPAN3-202ENST00000346495 ATP5J2-PTCD1G3V325 749 aa26.64■■□□□ 1.85
TSPAN3-202ENST00000346495 EXOC6BQ9Y2D4 811 aa26.64■■□□□ 1.85
TSPAN3-202ENST00000346495 ZNF330Q9Y3S2 320 aaPredicted RBP26.64■■□□□ 1.85
TSPAN3-202ENST00000346495 RREB1Q92766 1687 aa26.63■■□□□ 1.85
TSPAN3-202ENST00000346495 IL6STP40189 918 aaPredicted RBP26.62■■□□□ 1.85
TSPAN3-202ENST00000346495 ZBTB1Q9Y2K1 713 aa26.62■■□□□ 1.85
TSPAN3-202ENST00000346495 COL15A1P39059 1388 aa26.62■■□□□ 1.85
TSPAN3-202ENST00000346495 APBB1O00213 710 aa26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 RAB11FIP3O75154 756 aa26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 CWC25Q9NXE8 425 aaPredicted RBP26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 MAP3K15Q6ZN16 1313 aa26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 SEPT12Q8IYM1 358 aa26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 CCDC191Q8NCU4 936 aa26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 KAZALD1Q96I82 304 aa26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 LRRCC1Q9C099 1032 aa26.61■■□□□ 1.85
TSPAN3-202ENST00000346495 BTAF1O14981 1849 aa26.6■■□□□ 1.85
TSPAN3-202ENST00000346495 A0A087WZG4 1122 aa26.6■■□□□ 1.85
TSPAN3-202ENST00000346495 NPM2Q86SE8 214 aaKnown RBP26.6■■□□□ 1.85
TSPAN3-202ENST00000346495 BICC1Q9H694 974 aaKnown RBP26.6■■□□□ 1.85
TSPAN3-202ENST00000346495 CCDC87Q9NVE4 849 aa26.6■■□□□ 1.85
TSPAN3-202ENST00000346495 SMARCA5O60264 1052 aaPredicted RBP26.59■■□□□ 1.85
TSPAN3-202ENST00000346495 TCIRG1Q13488 830 aa26.59■■□□□ 1.85
TSPAN3-202ENST00000346495 HSP90AB4PQ58FF6 505 aa26.59■■□□□ 1.85
TSPAN3-202ENST00000346495 COL5A3P25940 1745 aaPredicted RBP26.59■■□□□ 1.85
TSPAN3-202ENST00000346495 SURF6O75683 361 aaKnown RBP26.58■■□□□ 1.85
TSPAN3-202ENST00000346495 PLEKHM2Q8IWE5 1019 aa26.58■■□□□ 1.85
TSPAN3-202ENST00000346495 ISCA1Q9BUE6 129 aa26.58■■□□□ 1.85
TSPAN3-202ENST00000346495 SBF2Q86WG5 1849 aa26.58■■□□□ 1.85
TSPAN3-202ENST00000346495 H7C1W4 665 aa26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 ITPK1Q13572 414 aa26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 BMP2KLQ5H9B9 411 aa26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 INTS5Q6P9B9 1019 aaKnown RBP26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 UBE3BQ7Z3V4 1068 aa26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 CRKLP46109 303 aaKnown RBP26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 TRIM28Q13263 835 aaKnown RBP26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 NOP58Q9Y2X3 529 aaKnown RBP26.57■■□□□ 1.84
TSPAN3-202ENST00000346495 ANKRD36CQ5JPF3 1778 aa26.56■■□□□ 1.84
TSPAN3-202ENST00000346495 CASP7P55210 303 aa26.56■■□□□ 1.84
TSPAN3-202ENST00000346495 HSP90AB3PQ58FF7 597 aa26.56■■□□□ 1.84
TSPAN3-202ENST00000346495 GIGYF2Q6Y7W6 1299 aaKnown RBP26.56■■□□□ 1.84
TSPAN3-202ENST00000346495 C16orf71Q8IYS4 520 aaPredicted RBP26.56■■□□□ 1.84
TSPAN3-202ENST00000346495 ARXQ96QS3 562 aa26.56■■□□□ 1.84
TSPAN3-202ENST00000346495 ERVV-1B6SEH8 477 aa26.54■■□□□ 1.84
TSPAN3-202ENST00000346495 EIF5P55010 431 aaKnown RBP26.54■■□□□ 1.84
TSPAN3-202ENST00000346495 DZIP3Q86Y13 1208 aaKnown RBP26.54■■□□□ 1.84
TSPAN3-202ENST00000346495 KIF1BPQ96EK5 621 aa26.54■■□□□ 1.84
TSPAN3-202ENST00000346495 NUP98P52948 1817 aa26.53■■□□□ 1.84
TSPAN3-202ENST00000346495 FAM182BQ5T319 152 aa26.53■■□□□ 1.84
TSPAN3-202ENST00000346495 MYH14Q7Z406 1995 aaKnown RBP26.53■■□□□ 1.84
TSPAN3-202ENST00000346495 RABL6Q3YEC7 729 aaPredicted RBP26.52■■□□□ 1.84
TSPAN3-202ENST00000346495 EPHA10Q5JZY3 1008 aa26.52■■□□□ 1.84
TSPAN3-202ENST00000346495 JARID2Q92833 1246 aaPredicted RBP26.52■■□□□ 1.84
TSPAN3-202ENST00000346495 BCL11AQ9H165 835 aa26.52■■□□□ 1.84
TSPAN3-202ENST00000346495 ZNF772Q68DY9 489 aaPredicted RBP26.51■■□□□ 1.83
TSPAN3-202ENST00000346495 PTF1AQ7RTS3 328 aa26.51■■□□□ 1.83
TSPAN3-202ENST00000346495 RHPN1Q8TCX5 695 aa26.51■■□□□ 1.83
TSPAN3-202ENST00000346495 ERC1Q8IUD2 1116 aa26.5■■□□□ 1.83
TSPAN3-202ENST00000346495 OTUD7AQ8TE49 926 aaPredicted RBP26.5■■□□□ 1.83
TSPAN3-202ENST00000346495 OS9Q13438 667 aaPredicted RBP26.5■■□□□ 1.83
TSPAN3-202ENST00000346495 HLFQ16534 295 aa26.5■■□□□ 1.83
TSPAN3-202ENST00000346495 TTC22Q5TAA0 569 aa26.5■■□□□ 1.83
TSPAN3-202ENST00000346495 OSBPL3Q9H4L5 887 aa26.5■■□□□ 1.83
TSPAN3-202ENST00000346495 TBC1D2BQ9UPU7 963 aa26.49■■□□□ 1.83
TSPAN3-202ENST00000346495 BRWD3Q6RI45 1802 aa26.49■■□□□ 1.83
TSPAN3-202ENST00000346495 LY75O60449 1722 aa26.49■■□□□ 1.83
TSPAN3-202ENST00000346495 SALL3Q9BXA9 1300 aa26.48■■□□□ 1.83
TSPAN3-202ENST00000346495 ANP32AP39687 249 aaKnown RBP26.47■■□□□ 1.83
TSPAN3-202ENST00000346495 LINC00116Q8NCU8 138 aa26.47■■□□□ 1.83
TSPAN3-202ENST00000346495 CNTNAP4Q9C0A0 1308 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms