RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 NPHP1O15259 732 aa22.2■■□□□ 1.14
CD55-202ENST00000343420 ST5P78524 1137 aa22.2■■□□□ 1.14
CD55-202ENST00000343420 ZNF526Q8TF50 670 aaPredicted RBP22.2■■□□□ 1.14
CD55-202ENST00000343420 CCDC24Q8N4L8 307 aa22.19■■□□□ 1.14
CD55-202ENST00000343420 COL11A2P13942 1736 aaPredicted RBP22.19■■□□□ 1.14
CD55-202ENST00000343420 NUP98P52948 1817 aa22.19■■□□□ 1.14
CD55-202ENST00000343420 ERBB4Q15303 1308 aa22.18■■□□□ 1.14
CD55-202ENST00000343420 NIP7Q9Y221 180 aaKnown RBP eCLIP22.18■■□□□ 1.14
CD55-202ENST00000343420 C9orf131Q5VYM1 1079 aa22.17■■□□□ 1.14
CD55-202ENST00000343420 NBPF5PQ86XG9 351 aaPredicted RBP22.17■■□□□ 1.14
CD55-202ENST00000343420 NGEFQ8N5V2 710 aa22.17■■□□□ 1.14
CD55-202ENST00000343420 ZNF622Q969S3 477 aaKnown RBP eCLIP22.17■■□□□ 1.143e-8■□□□□ 10.7
CD55-202ENST00000343420 TRIM35Q9UPQ4 493 aa22.17■■□□□ 1.14
CD55-202ENST00000343420 ERVV-1B6SEH8 477 aa22.16■■□□□ 1.14
CD55-202ENST00000343420 HLFQ16534 295 aa22.16■■□□□ 1.14
CD55-202ENST00000343420 MYL6BP14649 208 aa22.15■■□□□ 1.14
CD55-202ENST00000343420 TPTE2Q6XPS3 522 aa22.15■■□□□ 1.14
CD55-202ENST00000343420 KIF6Q6ZMV9 814 aa22.15■■□□□ 1.14
CD55-202ENST00000343420 MAP3K15Q6ZN16 1313 aa22.14■■□□□ 1.14
CD55-202ENST00000343420 CACNA1SQ13698 1873 aa22.14■■□□□ 1.13
CD55-202ENST00000343420 CCDC88AQ3V6T2 1871 aa22.14■■□□□ 1.13
CD55-202ENST00000343420 CHL1O00533 1208 aa22.14■■□□□ 1.13
CD55-202ENST00000343420 EIF2S2P20042 333 aaKnown RBP22.13■■□□□ 1.13
CD55-202ENST00000343420 TTLL7Q6ZT98 887 aa22.13■■□□□ 1.13
CD55-202ENST00000343420 RNF181Q9P0P0 153 aa22.13■■□□□ 1.13
CD55-202ENST00000343420 ARFGEF2Q9Y6D5 1785 aa22.12■■□□□ 1.13
CD55-202ENST00000343420 SRGNP10124 158 aa22.12■■□□□ 1.13
CD55-202ENST00000343420 STYK1Q6J9G0 422 aa22.12■■□□□ 1.13
CD55-202ENST00000343420 CNKSR1Q969H4 720 aa22.12■■□□□ 1.13
CD55-202ENST00000343420 MASTLQ96GX5 879 aa22.12■■□□□ 1.13
CD55-202ENST00000343420 LAS1LQ9Y4W2 734 aaKnown RBP22.12■■□□□ 1.13
CD55-202ENST00000343420 SLX4Q8IY92 1834 aa22.11■■□□□ 1.13
CD55-202ENST00000343420 ZNF316A6NFI3 1004 aaPredicted RBP22.11■■□□□ 1.13
CD55-202ENST00000343420 RASSF7Q02833 373 aa22.11■■□□□ 1.13
CD55-202ENST00000343420 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
CD55-202ENST00000343420 PDIA6Q15084 440 aa22.1■■□□□ 1.13
CD55-202ENST00000343420 FER1L6Q2WGJ9 1857 aa22.1■■□□□ 1.13
CD55-202ENST00000343420 KLRG2A4D1S0 409 aaPredicted RBP22.09■■□□□ 1.13
CD55-202ENST00000343420 KIF3CO14782 793 aa22.09■■□□□ 1.13
CD55-202ENST00000343420 LRP10Q7Z4F1 713 aa22.09■■□□□ 1.13
CD55-202ENST00000343420 NYXQ9GZU5 481 aa22.09■■□□□ 1.13
CD55-202ENST00000343420 ZBTB3Q9H5J0 574 aa22.09■■□□□ 1.13
CD55-202ENST00000343420 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
CD55-202ENST00000343420 APAF1O14727 1248 aa22.08■■□□□ 1.13
CD55-202ENST00000343420 C21orf2O43822 256 aa22.08■■□□□ 1.13
CD55-202ENST00000343420 LMNB1P20700 586 aa22.08■■□□□ 1.13
CD55-202ENST00000343420 GTF2E1P29083 439 aaPredicted RBP22.08■■□□□ 1.13
CD55-202ENST00000343420 NFKBIEO00221 500 aa22.07■■□□□ 1.12
CD55-202ENST00000343420 PROSER3Q2NL68 480 aa22.07■■□□□ 1.12
CD55-202ENST00000343420 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
CD55-202ENST00000343420 CFAP44Q96MT7 982 aa22.07■■□□□ 1.12
CD55-202ENST00000343420 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
CD55-202ENST00000343420 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
CD55-202ENST00000343420 NPR1P16066 1061 aa22.06■■□□□ 1.12
CD55-202ENST00000343420 PRELPP51888 382 aa22.06■■□□□ 1.12
CD55-202ENST00000343420 KRT24Q2M2I5 525 aa22.06■■□□□ 1.12
CD55-202ENST00000343420 PRPF40BQ6NWY9 871 aaKnown RBP22.06■■□□□ 1.12
CD55-202ENST00000343420 IBTKQ9P2D0 1353 aaPredicted RBP22.06■■□□□ 1.12
CD55-202ENST00000343420 DICER1Q9UPY3 1922 aaKnown RBP22.06■■□□□ 1.12
CD55-202ENST00000343420 ANXA1P04083 346 aa22.05■■□□□ 1.12
CD55-202ENST00000343420 HOXB7P09629 217 aa22.05■■□□□ 1.12
CD55-202ENST00000343420 GPTP24298 496 aa22.05■■□□□ 1.12
CD55-202ENST00000343420 SOGA3Q5TF21 947 aa22.05■■□□□ 1.12
CD55-202ENST00000343420 ZNF34Q8IZ26 560 aa22.05■■□□□ 1.12
CD55-202ENST00000343420 NECTIN2Q92692 538 aa22.05■■□□□ 1.12
CD55-202ENST00000343420 KDM2BQ8NHM5 1336 aa22.05■■□□□ 1.12
CD55-202ENST00000343420 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
CD55-202ENST00000343420 NMRK2Q9NPI5 230 aa22.04■■□□□ 1.12
CD55-202ENST00000343420 DDX21Q9NR30 783 aaKnown RBP eCLIP22.04■■□□□ 1.12
CD55-202ENST00000343420 UBN2Q6ZU65 1347 aa22.04■■□□□ 1.12
CD55-202ENST00000343420 TIAM2Q8IVF5 1701 aa22.03■■□□□ 1.12
CD55-202ENST00000343420 ZNF853P0CG23 659 aa22.03■■□□□ 1.12
CD55-202ENST00000343420 CALD1Q05682 793 aaKnown RBP22.03■■□□□ 1.12
CD55-202ENST00000343420 NUTM1Q86Y26 1132 aa22.03■■□□□ 1.12
CD55-202ENST00000343420 TNRC6CQ9HCJ0 1690 aaKnown RBP22.03■■□□□ 1.12
CD55-202ENST00000343420 ANKRD36CQ5JPF3 1778 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 ABCC12Q96J65 1359 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 ERFEQ4G0M1 354 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 SUSD4Q5VX71 490 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 COPS6Q7L5N1 327 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 MBIPQ9NS73 344 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 IFT57Q9NWB7 429 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 LTBP3Q9NS15 1303 aa22.02■■□□□ 1.12
CD55-202ENST00000343420 RIC1Q4ADV7 1423 aa22.01■■□□□ 1.11
CD55-202ENST00000343420 HDGFL1Q5TGJ6 251 aa22.01■■□□□ 1.11
CD55-202ENST00000343420 PPP1R42Q7Z4L9 355 aa22.01■■□□□ 1.11
CD55-202ENST00000343420 XAGE3Q8WTP9 111 aa22.01■■□□□ 1.11
CD55-202ENST00000343420 C7orf43Q8WVR3 580 aa22.01■■□□□ 1.11
CD55-202ENST00000343420 TAOK3Q9H2K8 898 aa22.01■■□□□ 1.11
CD55-202ENST00000343420 ANP32CO43423 234 aa22■■□□□ 1.11
CD55-202ENST00000343420 ALDH1B1P30837 517 aa22■■□□□ 1.11
CD55-202ENST00000343420 GNAI1P63096 354 aa22■■□□□ 1.11
CD55-202ENST00000343420 AIMP1Q12904 312 aaKnown RBP22■■□□□ 1.11
CD55-202ENST00000343420 CRY2Q49AN0 593 aa22■■□□□ 1.11
CD55-202ENST00000343420 CHPF2Q9P2E5 772 aa22■■□□□ 1.11
CD55-202ENST00000343420 TOMM70O94826 608 aa21.99■■□□□ 1.11
CD55-202ENST00000343420 NTSR2O95665 410 aa21.99■■□□□ 1.11
CD55-202ENST00000343420 HSP90AB3PQ58FF7 597 aa21.99■■□□□ 1.11
CD55-202ENST00000343420 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms