RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PLBD2Q8NHP8 589 aa24.71■■□□□ 1.55
RTN1-202ENST00000342503 C22orf23Q9BZE7 217 aa24.71■■□□□ 1.55
RTN1-202ENST00000342503 ATG3Q9NT62 314 aa24.71■■□□□ 1.55
RTN1-202ENST00000342503 SALL3Q9BXA9 1300 aa24.71■■□□□ 1.55
RTN1-202ENST00000342503 SLIT2O94813 1529 aa24.71■■□□□ 1.55
RTN1-202ENST00000342503 DOT1LQ8TEK3 1739 aa24.7■■□□□ 1.55
RTN1-202ENST00000342503 PDE1AP54750 535 aa24.7■■□□□ 1.54
RTN1-202ENST00000342503 TUBGCP6Q96RT7 1819 aa24.7■■□□□ 1.54
RTN1-202ENST00000342503 KAZALD1Q96I82 304 aa24.69■■□□□ 1.54
RTN1-202ENST00000342503 BCL9O00512 1426 aa24.69■■□□□ 1.54
RTN1-202ENST00000342503 ANP32EQ9BTT0 268 aa24.69■■□□□ 1.54
RTN1-202ENST00000342503 KAT6BQ8WYB5 2073 aa24.68■■□□□ 1.54
RTN1-202ENST00000342503 SPATA31A5Q5VU36 1347 aa24.68■■□□□ 1.54
RTN1-202ENST00000342503 SPATA31A7Q8IWB4 1347 aa24.68■■□□□ 1.54
RTN1-202ENST00000342503 SDSP20132 328 aa24.67■■□□□ 1.54
RTN1-202ENST00000342503 SLC4A3P48751 1232 aa24.67■■□□□ 1.54
RTN1-202ENST00000342503 TTLL7Q6ZT98 887 aa24.67■■□□□ 1.54
RTN1-202ENST00000342503 VSIG10Q8N0Z9 540 aa24.67■■□□□ 1.54
RTN1-202ENST00000342503 RHPN1Q8TCX5 695 aa24.66■■□□□ 1.54
RTN1-202ENST00000342503 BICC1Q9H694 974 aaKnown RBP24.66■■□□□ 1.54
RTN1-202ENST00000342503 IL1RAPL2Q9NP60 686 aa24.66■■□□□ 1.54
RTN1-202ENST00000342503 MX1P20591 662 aa24.66■■□□□ 1.54
RTN1-202ENST00000342503 DDB1Q16531 1140 aa24.66■■□□□ 1.54
RTN1-202ENST00000342503 HSP90AB4PQ58FF6 505 aa24.66■■□□□ 1.54
RTN1-202ENST00000342503 DAXXQ9UER7 740 aaPredicted RBP24.66■■□□□ 1.54
RTN1-202ENST00000342503 ATP5J2-PTCD1G3V325 749 aa24.65■■□□□ 1.54
RTN1-202ENST00000342503 DNAJC10Q8IXB1 793 aa24.65■■□□□ 1.54
RTN1-202ENST00000342503 KIF1BPQ96EK5 621 aa24.65■■□□□ 1.54
RTN1-202ENST00000342503 RBM42Q9BTD8 480 aaKnown RBP24.65■■□□□ 1.54
RTN1-202ENST00000342503 TEX13AQ9BXU3 409 aaPredicted RBP24.65■■□□□ 1.54
RTN1-202ENST00000342503 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.64■■□□□ 1.54
RTN1-202ENST00000342503 CCDC9Q9Y3X0 531 aaKnown RBP24.64■■□□□ 1.54
RTN1-202ENST00000342503 TSHZ3Q63HK5 1081 aa24.64■■□□□ 1.53
RTN1-202ENST00000342503 STAP2Q9UGK3 403 aa24.64■■□□□ 1.53
RTN1-202ENST00000342503 SYTL4Q96C24 671 aaPredicted RBP24.63■■□□□ 1.53
RTN1-202ENST00000342503 JCADQ9P266 1359 aa24.63■■□□□ 1.53
RTN1-202ENST00000342503 BARGINQ6ZT62 677 aa24.62■■□□□ 1.53
RTN1-202ENST00000342503 PRIM1P49642 420 aaKnown RBP24.61■■□□□ 1.53
RTN1-202ENST00000342503 OS9Q13438 667 aaPredicted RBP24.61■■□□□ 1.53
RTN1-202ENST00000342503 EPHA10Q5JZY3 1008 aa24.61■■□□□ 1.53
RTN1-202ENST00000342503 NUTM1Q86Y26 1132 aa24.61■■□□□ 1.53
RTN1-202ENST00000342503 JARID2Q92833 1246 aaPredicted RBP24.61■■□□□ 1.53
RTN1-202ENST00000342503 PA2G4Q9UQ80 394 aaKnown RBP24.61■■□□□ 1.53
RTN1-202ENST00000342503 TJP1Q07157 1748 aa24.61■■□□□ 1.53
RTN1-202ENST00000342503 RBM25P49756 843 aaKnown RBP24.61■■□□□ 1.53
RTN1-202ENST00000342503 ZBTB3Q9H5J0 574 aa24.61■■□□□ 1.53
RTN1-202ENST00000342503 UNC5CLQ8IV45 518 aa24.6■■□□□ 1.53
RTN1-202ENST00000342503 MARCH10Q8NA82 808 aaPredicted RBP24.6■■□□□ 1.53
RTN1-202ENST00000342503 AOX1Q06278 1338 aa24.59■■□□□ 1.53
RTN1-202ENST00000342503 A0A087WZG4 1122 aa24.59■■□□□ 1.53
RTN1-202ENST00000342503 STARD3NLO95772 234 aa24.59■■□□□ 1.53
RTN1-202ENST00000342503 UBE3BQ7Z3V4 1068 aa24.59■■□□□ 1.53
RTN1-202ENST00000342503 SLC4A9Q96Q91 983 aa24.59■■□□□ 1.53
RTN1-202ENST00000342503 COL15A1P39059 1388 aa24.58■■□□□ 1.53
RTN1-202ENST00000342503 BECN1Q14457 450 aa24.58■■□□□ 1.53
RTN1-202ENST00000342503 C8orf37Q96NL8 207 aa24.58■■□□□ 1.53
RTN1-202ENST00000342503 EIF5BO60841 1220 aaKnown RBP24.58■■□□□ 1.52
RTN1-202ENST00000342503 CASP7P55210 303 aa24.58■■□□□ 1.52
RTN1-202ENST00000342503 ERC1Q8IUD2 1116 aa24.58■■□□□ 1.52
RTN1-202ENST00000342503 CASC1Q6TDU7 716 aa24.57■■□□□ 1.52
RTN1-202ENST00000342503 NGLY1Q96IV0 654 aa24.56■■□□□ 1.52
RTN1-202ENST00000342503 CWC25Q9NXE8 425 aaPredicted RBP24.56■■□□□ 1.52
RTN1-202ENST00000342503 ZNF330Q9Y3S2 320 aaPredicted RBP24.56■■□□□ 1.52
RTN1-202ENST00000342503 H7C1W4 665 aa24.55■■□□□ 1.52
RTN1-202ENST00000342503 BCL9LQ86UU0 1499 aa24.55■■□□□ 1.52
RTN1-202ENST00000342503 CYP19A1P11511 503 aaPredicted RBP24.55■■□□□ 1.52
RTN1-202ENST00000342503 G3BP1Q13283 466 aaKnown RBP eCLIP24.55■■□□□ 1.52
RTN1-202ENST00000342503 ACSBG1Q96GR2 724 aa24.55■■□□□ 1.52
RTN1-202ENST00000342503 AK9Q5TCS8 1911 aa24.55■■□□□ 1.52
RTN1-202ENST00000342503 RABL6Q3YEC7 729 aaPredicted RBP24.54■■□□□ 1.52
RTN1-202ENST00000342503 VPS72Q15906 364 aa24.53■■□□□ 1.52
RTN1-202ENST00000342503 CLASRPQ8N2M8 674 aaKnown RBP24.53■■□□□ 1.52
RTN1-202ENST00000342503 CCDC191Q8NCU4 936 aa24.53■■□□□ 1.52
RTN1-202ENST00000342503 A0A0G2JS52 829 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 TRIM6-TRIM34B2RNG4 842 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 KIF6Q6ZMV9 814 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 KLHDC4Q8TBB5 520 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 PI4K2BQ8TCG2 481 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 SASH1O94885 1247 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 RFX5P48382 616 aaPredicted RBP24.52■■□□□ 1.52
RTN1-202ENST00000342503 FAM98CQ17RN3 349 aaKnown RBP24.52■■□□□ 1.52
RTN1-202ENST00000342503 RILPL2Q969X0 211 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 ISCA1Q9BUE6 129 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 TBC1D2Q9BYX2 928 aa24.52■■□□□ 1.52
RTN1-202ENST00000342503 USP42Q9H9J4 1324 aaKnown RBP24.52■■□□□ 1.52
RTN1-202ENST00000342503 TCIRG1Q13488 830 aa24.51■■□□□ 1.51
RTN1-202ENST00000342503 CERKQ8TCT0 537 aa24.51■■□□□ 1.51
RTN1-202ENST00000342503 SIL1Q9H173 461 aa24.51■■□□□ 1.51
RTN1-202ENST00000342503 SPATA31A6Q5VVP1 1343 aa24.5■■□□□ 1.51
RTN1-202ENST00000342503 FOXO4P98177 505 aa24.49■■□□□ 1.51
RTN1-202ENST00000342503 FNBP4Q8N3X1 1017 aaPredicted RBP24.49■■□□□ 1.51
RTN1-202ENST00000342503 COPRSQ9NQ92 184 aa24.49■■□□□ 1.51
RTN1-202ENST00000342503 TTC41PQ6P2S7 1318 aa24.49■■□□□ 1.51
RTN1-202ENST00000342503 MAP3K15Q6ZN16 1313 aa24.49■■□□□ 1.51
RTN1-202ENST00000342503 KIF2CQ99661 725 aa24.49■■□□□ 1.51
RTN1-202ENST00000342503 USP26Q9BXU7 913 aa24.49■■□□□ 1.51
RTN1-202ENST00000342503 ZBTB1Q9Y2K1 713 aa24.49■■□□□ 1.51
RTN1-202ENST00000342503 ERC2O15083 957 aa24.48■■□□□ 1.51
RTN1-202ENST00000342503 IFIT2P09913 472 aaKnown RBP24.48■■□□□ 1.51
RTN1-202ENST00000342503 RTL5Q5HYW3 569 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms