RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 NUP188Q5SRE5 1749 aa27.14■■□□□ 1.93
SOX18-201ENST00000340356 NBPF7P0C2Y1 421 aaPredicted RBP27.13■■□□□ 1.93
SOX18-201ENST00000340356 CEP85Q6P2H3 762 aa27.13■■□□□ 1.93
SOX18-201ENST00000340356 ZBTB3Q9H5J0 574 aa27.13■■□□□ 1.93
SOX18-201ENST00000340356 CICQ96RK0 1608 aaPredicted RBP27.13■■□□□ 1.93
SOX18-201ENST00000340356 GNAI2P04899 355 aa27.13■■□□□ 1.93
SOX18-201ENST00000340356 ALDH1L1O75891 902 aa27.12■■□□□ 1.93
SOX18-201ENST00000340356 INTS5Q6P9B9 1019 aaKnown RBP27.12■■□□□ 1.93
SOX18-201ENST00000340356 UBTFL1P0CB47 393 aaPredicted RBP27.11■■□□□ 1.93
SOX18-201ENST00000340356 RXRBP28702 533 aa27.11■■□□□ 1.93
SOX18-201ENST00000340356 CRKLP46109 303 aaKnown RBP27.11■■□□□ 1.93
SOX18-201ENST00000340356 ANKRD44Q8N8A2 993 aa27.11■■□□□ 1.93
SOX18-201ENST00000340356 LRRFIP2Q9Y608 721 aaKnown RBP27.11■■□□□ 1.93
SOX18-201ENST00000340356 EP400Q96L91 3159 aa27.11■■□□□ 1.93
SOX18-201ENST00000340356 NEXNQ0ZGT2 675 aa27.1■■□□□ 1.93
SOX18-201ENST00000340356 NEURL1BA8MQ27 555 aa27.1■■□□□ 1.93
SOX18-201ENST00000340356 ATP5J2-PTCD1G3V325 749 aa27.1■■□□□ 1.93
SOX18-201ENST00000340356 POTEAQ6S8J7 498 aa27.1■■□□□ 1.93
SOX18-201ENST00000340356 COL5A3P25940 1745 aaPredicted RBP27.1■■□□□ 1.93
SOX18-201ENST00000340356 FAM196AQ6ZSG2 479 aa27.09■■□□□ 1.93
SOX18-201ENST00000340356 CCDC87Q9NVE4 849 aa27.09■■□□□ 1.93
SOX18-201ENST00000340356 MYH14Q7Z406 1995 aaKnown RBP27.09■■□□□ 1.93
SOX18-201ENST00000340356 LINC00116Q8NCU8 138 aa27.08■■□□□ 1.93
SOX18-201ENST00000340356 ARXQ96QS3 562 aa27.08■■□□□ 1.93
SOX18-201ENST00000340356 ZNF831Q5JPB2 1677 aa27.08■■□□□ 1.93
SOX18-201ENST00000340356 RPAP2Q8IXW5 612 aaPredicted RBP27.08■■□□□ 1.93
SOX18-201ENST00000340356 BCL11BQ9C0K0 894 aaPredicted RBP27.08■■□□□ 1.93
SOX18-201ENST00000340356 C9orf78Q9NZ63 289 aaPredicted RBP27.08■■□□□ 1.93
SOX18-201ENST00000340356 RREB1Q92766 1687 aa27.07■■□□□ 1.92
SOX18-201ENST00000340356 SMC5Q8IY18 1101 aa27.07■■□□□ 1.92
SOX18-201ENST00000340356 AFDNP55196 1824 aaKnown RBP27.07■■□□□ 1.92
SOX18-201ENST00000340356 PDZRN3Q9UPQ7 1066 aa27.06■■□□□ 1.92
SOX18-201ENST00000340356 IL6STP40189 918 aaPredicted RBP27.06■■□□□ 1.92
SOX18-201ENST00000340356 GRM8O00222 908 aa27.05■■□□□ 1.92
SOX18-201ENST00000340356 TRIM37O94972 964 aa27.05■■□□□ 1.92
SOX18-201ENST00000340356 GCKRQ14397 625 aa27.05■■□□□ 1.92
SOX18-201ENST00000340356 KIF6Q6ZMV9 814 aa27.05■■□□□ 1.92
SOX18-201ENST00000340356 LY75O60449 1722 aa27.05■■□□□ 1.92
SOX18-201ENST00000340356 PNMA6EA0A0J9YXQ4 647 aa27.04■■□□□ 1.92
SOX18-201ENST00000340356 JARID2Q92833 1246 aaPredicted RBP27.04■■□□□ 1.92
SOX18-201ENST00000340356 MAP3K15Q6ZN16 1313 aa27.03■■□□□ 1.92
SOX18-201ENST00000340356 EIF5P55010 431 aaKnown RBP27.03■■□□□ 1.92
SOX18-201ENST00000340356 CCNL1Q9UK58 526 aaPredicted RBP27.03■■□□□ 1.92
SOX18-201ENST00000340356 UTYO14607 1347 aa27.02■■□□□ 1.92
SOX18-201ENST00000340356 RGS3P49796 1198 aa27.02■■□□□ 1.92
SOX18-201ENST00000340356 HLFQ16534 295 aa27.02■■□□□ 1.92
SOX18-201ENST00000340356 TBC1D2BQ9UPU7 963 aa27.02■■□□□ 1.92
SOX18-201ENST00000340356 RBM19Q9Y4C8 960 aaKnown RBP27.02■■□□□ 1.92
SOX18-201ENST00000340356 ATP8B2P98198 1209 aa27.01■■□□□ 1.91
SOX18-201ENST00000340356 DZIP3Q86Y13 1208 aaKnown RBP27.01■■□□□ 1.91
SOX18-201ENST00000340356 SUCLG2Q96I99 432 aa27.01■■□□□ 1.91
SOX18-201ENST00000340356 KAZALD1Q96I82 304 aa27■■□□□ 1.91
SOX18-201ENST00000340356 GCC1Q96CN9 775 aa26.99■■□□□ 1.91
SOX18-201ENST00000340356 DCTPP1Q9H773 170 aa26.99■■□□□ 1.91
SOX18-201ENST00000340356 IBTKQ9P2D0 1353 aaPredicted RBP26.99■■□□□ 1.91
SOX18-201ENST00000340356 TCIRG1Q13488 830 aa26.98■■□□□ 1.91
SOX18-201ENST00000340356 SMIM5Q71RC9 77 aa26.98■■□□□ 1.91
SOX18-201ENST00000340356 A0A087WZG4 1122 aa26.98■■□□□ 1.91
SOX18-201ENST00000340356 GIGYF2Q6Y7W6 1299 aaKnown RBP26.98■■□□□ 1.91
SOX18-201ENST00000340356 NPM2Q86SE8 214 aaKnown RBP26.98■■□□□ 1.91
SOX18-201ENST00000340356 ISCA1Q9BUE6 129 aa26.98■■□□□ 1.91
SOX18-201ENST00000340356 CNTNAP4Q9C0A0 1308 aa26.97■■□□□ 1.91
SOX18-201ENST00000340356 UBE3BQ7Z3V4 1068 aa26.97■■□□□ 1.91
SOX18-201ENST00000340356 PPP1R42Q7Z4L9 355 aa26.97■■□□□ 1.91
SOX18-201ENST00000340356 CWC25Q9NXE8 425 aaPredicted RBP26.97■■□□□ 1.91
SOX18-201ENST00000340356 HMMRO75330 724 aa26.96■■□□□ 1.91
SOX18-201ENST00000340356 NUCB1Q02818 461 aa26.96■■□□□ 1.91
SOX18-201ENST00000340356 LRRC4BQ9NT99 713 aa26.96■■□□□ 1.91
SOX18-201ENST00000340356 TAF1LQ8IZX4 1826 aa26.96■■□□□ 1.91
SOX18-201ENST00000340356 ANKRD45Q5TZF3 282 aa26.96■■□□□ 1.91
SOX18-201ENST00000340356 COL15A1P39059 1388 aa26.95■■□□□ 1.9
SOX18-201ENST00000340356 RTL5Q5HYW3 569 aaPredicted RBP26.95■■□□□ 1.9
SOX18-201ENST00000340356 BICC1Q9H694 974 aaKnown RBP26.95■■□□□ 1.9
SOX18-201ENST00000340356 GPTP24298 496 aa26.94■■□□□ 1.9
SOX18-201ENST00000340356 PDE4AP27815 886 aa26.94■■□□□ 1.9
SOX18-201ENST00000340356 CASP7P55210 303 aa26.94■■□□□ 1.9
SOX18-201ENST00000340356 EPHA10Q5JZY3 1008 aa26.94■■□□□ 1.9
SOX18-201ENST00000340356 CCDC191Q8NCU4 936 aa26.94■■□□□ 1.9
SOX18-201ENST00000340356 LNPKQ9C0E8 428 aa26.94■■□□□ 1.9
SOX18-201ENST00000340356 NUP98P52948 1817 aa26.94■■□□□ 1.9
SOX18-201ENST00000340356 ERVV-1B6SEH8 477 aa26.93■■□□□ 1.9
SOX18-201ENST00000340356 SRGAP3O43295 1099 aa26.93■■□□□ 1.9
SOX18-201ENST00000340356 SSH3Q8TE77 659 aa26.93■■□□□ 1.9
SOX18-201ENST00000340356 APBB1O00213 710 aa26.93■■□□□ 1.9
SOX18-201ENST00000340356 CHD1LQ86WJ1 897 aa26.93■■□□□ 1.9
SOX18-201ENST00000340356 H7C1W4 665 aa26.92■■□□□ 1.9
SOX18-201ENST00000340356 CAMTA2O94983 1202 aa26.92■■□□□ 1.9
SOX18-201ENST00000340356 POLA2Q14181 598 aa26.92■■□□□ 1.9
SOX18-201ENST00000340356 EXOC6BQ9Y2D4 811 aa26.92■■□□□ 1.9
SOX18-201ENST00000340356 ANKRD36CQ5JPF3 1778 aa26.92■■□□□ 1.9
SOX18-201ENST00000340356 RC3H1Q5TC82 1133 aaKnown RBP26.91■■□□□ 1.9
SOX18-201ENST00000340356 GNPATO15228 680 aa26.91■■□□□ 1.9
SOX18-201ENST00000340356 AMIGO3Q86WK7 504 aa26.91■■□□□ 1.9
SOX18-201ENST00000340356 C4BP0C0L5 1744 aa26.9■■□□□ 1.9
SOX18-201ENST00000340356 TRIM28Q13263 835 aaKnown RBP26.9■■□□□ 1.9
SOX18-201ENST00000340356 MTX1Q13505 466 aa26.9■■□□□ 1.9
SOX18-201ENST00000340356 HDAC5Q9UQL6 1122 aa26.9■■□□□ 1.9
SOX18-201ENST00000340356 BCL11AQ9H165 835 aa26.89■■□□□ 1.9
SOX18-201ENST00000340356 HSP90AB3PQ58FF7 597 aa26.89■■□□□ 1.89
SOX18-201ENST00000340356 NLRP10Q86W26 655 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms