RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 LRP10Q7Z4F1 713 aa18.37■□□□□ 0.53
CTSL-201ENST00000340342 POLRMTO00411 1230 aaKnown RBP18.36■□□□□ 0.53
CTSL-201ENST00000340342 CAMTA2O94983 1202 aa18.36■□□□□ 0.53
CTSL-201ENST00000340342 NFIXQ14938 502 aa18.36■□□□□ 0.53
CTSL-201ENST00000340342 TWISTNBQ3B726 338 aaPredicted RBP18.36■□□□□ 0.53
CTSL-201ENST00000340342 TTLL7Q6ZT98 887 aa18.36■□□□□ 0.53
CTSL-201ENST00000340342 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
CTSL-201ENST00000340342 UTRNP46939 3433 aa18.35■□□□□ 0.53
CTSL-201ENST00000340342 DDR1Q08345 913 aa18.35■□□□□ 0.53
CTSL-201ENST00000340342 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTSL-201ENST00000340342 E9PSI1 815 aa18.34■□□□□ 0.53
CTSL-201ENST00000340342 RGL2O15211 777 aa18.34■□□□□ 0.53
CTSL-201ENST00000340342 SLFN5Q08AF3 891 aa18.34■□□□□ 0.53
CTSL-201ENST00000340342 CLEC4GQ6UXB4 293 aa18.34■□□□□ 0.53
CTSL-201ENST00000340342 TCERG1O14776 1098 aaKnown RBP18.33■□□□□ 0.53
CTSL-201ENST00000340342 CACNA1FO60840 1977 aa18.33■□□□□ 0.52
CTSL-201ENST00000340342 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 AIMP1Q12904 312 aaKnown RBP18.32■□□□□ 0.52
CTSL-201ENST00000340342 HLFQ16534 295 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 TBC1D9BQ66K14 1250 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 BICDL1Q6ZP65 573 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 PELP1Q8IZL8 1130 aaKnown RBP18.32■□□□□ 0.52
CTSL-201ENST00000340342 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 ZBTB3Q9H5J0 574 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
CTSL-201ENST00000340342 VAMP4O75379 141 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 SERPINB2P05120 415 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 COPS6Q7L5N1 327 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 ZNF652Q9Y2D9 606 aa18.32■□□□□ 0.52
CTSL-201ENST00000340342 CCDC30Q5VVM6 783 aa18.31■□□□□ 0.52
CTSL-201ENST00000340342 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
CTSL-201ENST00000340342 CHD4Q14839 1912 aa18.31■□□□□ 0.52
CTSL-201ENST00000340342 MAP3K15Q6ZN16 1313 aa18.3■□□□□ 0.52
CTSL-201ENST00000340342 ANKRD36CQ5JPF3 1778 aa18.3■□□□□ 0.52
CTSL-201ENST00000340342 ARFGEF2Q9Y6D5 1785 aa18.3■□□□□ 0.52
CTSL-201ENST00000340342 TRMT2AQ8IZ69 625 aaKnown RBP18.3■□□□□ 0.52
CTSL-201ENST00000340342 PHAXQ9H814 394 aaKnown RBP18.3■□□□□ 0.52
CTSL-201ENST00000340342 HYPKQ9NX55 129 aa18.3■□□□□ 0.52
CTSL-201ENST00000340342 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
CTSL-201ENST00000340342 N4BP2Q86UW6 1770 aaPredicted RBP18.29■□□□□ 0.52
CTSL-201ENST00000340342 A0A0G2JLW4 131 aa18.29■□□□□ 0.52
CTSL-201ENST00000340342 ERVV-1B6SEH8 477 aa18.29■□□□□ 0.52
CTSL-201ENST00000340342 YBX3P16989 372 aaKnown RBP eCLIP18.29■□□□□ 0.526e-11■■■□□ 17.5
CTSL-201ENST00000340342 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
CTSL-201ENST00000340342 CARMIL3Q8ND23 1372 aa18.28■□□□□ 0.52
CTSL-201ENST00000340342 PXDNLA1KZ92 1463 aa18.28■□□□□ 0.52
CTSL-201ENST00000340342 KIAA1551Q9HCM1 1747 aa18.27■□□□□ 0.52
CTSL-201ENST00000340342 DPEP1P16444 411 aa18.27■□□□□ 0.52
CTSL-201ENST00000340342 STK31Q9BXU1 1019 aa18.27■□□□□ 0.52
CTSL-201ENST00000340342 YY1P25490 414 aa18.26■□□□□ 0.51
CTSL-201ENST00000340342 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
CTSL-201ENST00000340342 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
CTSL-201ENST00000340342 KCNA3P22001 575 aa18.25■□□□□ 0.51
CTSL-201ENST00000340342 G2E3Q7L622 706 aa18.25■□□□□ 0.51
CTSL-201ENST00000340342 PIM2Q9P1W9 311 aa18.25■□□□□ 0.51
CTSL-201ENST00000340342 NIP7Q9Y221 180 aaKnown RBP eCLIP18.25■□□□□ 0.51
CTSL-201ENST00000340342 ANKRD31Q8N7Z5 1873 aa18.25■□□□□ 0.51
CTSL-201ENST00000340342 ATP10DQ9P241 1426 aa18.24■□□□□ 0.51
CTSL-201ENST00000340342 GPTP24298 496 aa18.24■□□□□ 0.51
CTSL-201ENST00000340342 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
CTSL-201ENST00000340342 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 PLBD2Q8NHP8 589 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 BRIP1Q9BX63 1249 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 PDZRN3Q9UPQ7 1066 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 BRCA1P38398 1863 aaKnown RBP18.23■□□□□ 0.51
CTSL-201ENST00000340342 UBN2Q6ZU65 1347 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 FAM177BA6PVY3 158 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 NPHP1O15259 732 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 PRR5LQ6MZQ0 368 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 TPTE2Q6XPS3 522 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 CCDC24Q8N4L8 307 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 CNBD1Q8NA66 436 aa18.23■□□□□ 0.51
CTSL-201ENST00000340342 PDE6BP35913 854 aa18.22■□□□□ 0.51
CTSL-201ENST00000340342 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
CTSL-201ENST00000340342 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
CTSL-201ENST00000340342 WWC3Q9ULE0 1092 aa18.22■□□□□ 0.51
CTSL-201ENST00000340342 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
CTSL-201ENST00000340342 H0YIN7 160 aa18.21■□□□□ 0.51
CTSL-201ENST00000340342 CHRNA5P30532 468 aa18.21■□□□□ 0.51
CTSL-201ENST00000340342 ST5P78524 1137 aa18.21■□□□□ 0.51
CTSL-201ENST00000340342 DALRD3Q5D0E6 543 aaKnown RBP18.21■□□□□ 0.51
CTSL-201ENST00000340342 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
CTSL-201ENST00000340342 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
CTSL-201ENST00000340342 FLIIQ13045 1269 aa18.2■□□□□ 0.5
CTSL-201ENST00000340342 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
CTSL-201ENST00000340342 ADCY9O60503 1353 aa18.19■□□□□ 0.5
CTSL-201ENST00000340342 TCIRG1Q13488 830 aa18.19■□□□□ 0.5
CTSL-201ENST00000340342 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
CTSL-201ENST00000340342 SSH1Q8WYL5 1049 aa18.19■□□□□ 0.5
CTSL-201ENST00000340342 COL11A2P13942 1736 aaPredicted RBP18.19■□□□□ 0.5
CTSL-201ENST00000340342 ARFGEF1Q9Y6D6 1849 aa18.18■□□□□ 0.5
CTSL-201ENST00000340342 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
CTSL-201ENST00000340342 ATP5J2-PTCD1G3V325 749 aa18.18■□□□□ 0.5
CTSL-201ENST00000340342 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
CTSL-201ENST00000340342 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
CTSL-201ENST00000340342 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
CTSL-201ENST00000340342 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
CTSL-201ENST00000340342 NYXQ9GZU5 481 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms