RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1.01
SLC3A2-201ENST00000338663 BCL9LQ86UU0 1499 aa21.33■■□□□ 1.01
SLC3A2-201ENST00000338663 SPATA31A6Q5VVP1 1343 aa21.33■■□□□ 1.01
SLC3A2-201ENST00000338663 KAT6BQ8WYB5 2073 aa21.33■■□□□ 1.01
SLC3A2-201ENST00000338663 NBPF26B4DH59 902 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 NBPF14Q5TI25 921 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 NBPF10Q6P3W6 841 aaKnown RBP21.33■■□□□ 1
SLC3A2-201ENST00000338663 UNC5CLQ8IV45 518 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 VSIG10Q8N0Z9 540 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 NBPF15Q8N660 670 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 METTL22Q9BUU2 404 aaPredicted RBP21.33■■□□□ 1
SLC3A2-201ENST00000338663 ATG3Q9NT62 314 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 CHMP5Q9NZZ3 219 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 UTYO14607 1347 aa21.33■■□□□ 1
SLC3A2-201ENST00000338663 IGKV5-2P06315 115 aa21.32■■□□□ 1
SLC3A2-201ENST00000338663 HDAC5Q9UQL6 1122 aa21.32■■□□□ 1
SLC3A2-201ENST00000338663 CCDC9Q9Y3X0 531 aaKnown RBP21.32■■□□□ 1
SLC3A2-201ENST00000338663 TJP1Q07157 1748 aa21.32■■□□□ 1
SLC3A2-201ENST00000338663 GOLGA6L3A6NEY3 463 aa21.31■■□□□ 1
SLC3A2-201ENST00000338663 GRM8O00222 908 aa21.31■■□□□ 1
SLC3A2-201ENST00000338663 MCM4P33991 863 aa21.31■■□□□ 1
SLC3A2-201ENST00000338663 POLA2Q14181 598 aa21.31■■□□□ 1
SLC3A2-201ENST00000338663 C8orf37Q96NL8 207 aa21.31■■□□□ 1
SLC3A2-201ENST00000338663 EXOC6BQ9Y2D4 811 aa21.31■■□□□ 1
SLC3A2-201ENST00000338663 NEURL1BA8MQ27 555 aa21.3■■□□□ 1
SLC3A2-201ENST00000338663 APBB1O00213 710 aa21.3■■□□□ 1
SLC3A2-201ENST00000338663 PPP1R42Q7Z4L9 355 aa21.3■■□□□ 1
SLC3A2-201ENST00000338663 PLEKHM2Q8IWE5 1019 aa21.3■■□□□ 1
SLC3A2-201ENST00000338663 PLBD2Q8NHP8 589 aa21.3■■□□□ 1
SLC3A2-201ENST00000338663 TEX13AQ9BXU3 409 aaPredicted RBP21.3■■□□□ 1
SLC3A2-201ENST00000338663 MTX1Q13505 466 aa21.29■■□□□ 1
SLC3A2-201ENST00000338663 MYD88Q99836 296 aa21.29■■□□□ 1
SLC3A2-201ENST00000338663 SMARCA5O60264 1052 aaPredicted RBP21.29■■□□□ 1
SLC3A2-201ENST00000338663 A1BGP04217 495 aa21.29■■□□□ 1
SLC3A2-201ENST00000338663 NGLY1Q96IV0 654 aa21.29■■□□□ 1
SLC3A2-201ENST00000338663 SRGAP3O43295 1099 aa21.28■■□□□ 1
SLC3A2-201ENST00000338663 VPS72Q15906 364 aa21.28■■□□□ 1
SLC3A2-201ENST00000338663 TUBGCP6Q96RT7 1819 aa21.28■■□□□ 1
SLC3A2-201ENST00000338663 CICQ96RK0 1608 aaPredicted RBP21.28■■□□□ 1
SLC3A2-201ENST00000338663 LRRCC1Q9C099 1032 aa21.27■■□□□ 1
SLC3A2-201ENST00000338663 DDX11L8A8MPP1 907 aa21.27■■□□□ 1
SLC3A2-201ENST00000338663 GCKRQ14397 625 aa21.27■■□□□ 1
SLC3A2-201ENST00000338663 C16orf71Q8IYS4 520 aaPredicted RBP21.27■■□□□ 1
SLC3A2-201ENST00000338663 FNBP4Q8N3X1 1017 aaPredicted RBP21.27■■□□□ 1
SLC3A2-201ENST00000338663 MARCH10Q8NA82 808 aaPredicted RBP21.27■■□□□ 1
SLC3A2-201ENST00000338663 SYTL4Q96C24 671 aaPredicted RBP21.27■■□□□ 1
SLC3A2-201ENST00000338663 C22orf23Q9BZE7 217 aa21.27■■□□□ 1
SLC3A2-201ENST00000338663 DNAJC10Q8IXB1 793 aa21.26■□□□□ 0.99
SLC3A2-201ENST00000338663 EIF5BO60841 1220 aaKnown RBP21.25■□□□□ 0.99
SLC3A2-201ENST00000338663 PRIM1P49642 420 aaKnown RBP21.25■□□□□ 0.99
SLC3A2-201ENST00000338663 OTUD7AQ8TE49 926 aaPredicted RBP21.25■□□□□ 0.99
SLC3A2-201ENST00000338663 RBM42Q9BTD8 480 aaKnown RBP21.25■□□□□ 0.99
SLC3A2-201ENST00000338663 THSD7AQ9UPZ6 1657 aa21.25■□□□□ 0.99
SLC3A2-201ENST00000338663 RAB11FIP3O75154 756 aa21.24■□□□□ 0.99
SLC3A2-201ENST00000338663 PTMSP20962 102 aa21.24■□□□□ 0.99
SLC3A2-201ENST00000338663 MRE11P49959 708 aa21.24■□□□□ 0.99
SLC3A2-201ENST00000338663 TTC22Q5TAA0 569 aa21.24■□□□□ 0.99
SLC3A2-201ENST00000338663 TTLL7Q6ZT98 887 aa21.24■□□□□ 0.99
SLC3A2-201ENST00000338663 SUCLG2Q96I99 432 aa21.24■□□□□ 0.99
SLC3A2-201ENST00000338663 STARD3NLO95772 234 aa21.23■□□□□ 0.99
SLC3A2-201ENST00000338663 GSPT1P15170 499 aaKnown RBP21.23■□□□□ 0.99
SLC3A2-201ENST00000338663 KAZALD1Q96I82 304 aa21.23■□□□□ 0.99
SLC3A2-201ENST00000338663 COL15A1P39059 1388 aa21.23■□□□□ 0.99
SLC3A2-201ENST00000338663 SALL3Q9BXA9 1300 aa21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 SURF6O75683 361 aaKnown RBP21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 XRCC6P12956 609 aaKnown RBP eCLIP21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 FAM98CQ17RN3 349 aaKnown RBP21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 HSCBQ8IWL3 235 aa21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 SLC4A9Q96Q91 983 aa21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 OSBPL3Q9H4L5 887 aa21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 RRAGDQ9NQL2 400 aaPredicted RBP21.22■□□□□ 0.99
SLC3A2-201ENST00000338663 CLCN1P35523 988 aa21.21■□□□□ 0.99
SLC3A2-201ENST00000338663 SNX21Q969T3 373 aa21.21■□□□□ 0.99
SLC3A2-201ENST00000338663 BICC1Q9H694 974 aaKnown RBP21.21■□□□□ 0.99
SLC3A2-201ENST00000338663 ANKRD36CQ5JPF3 1778 aa21.21■□□□□ 0.99
SLC3A2-201ENST00000338663 HSP90AB4PQ58FF6 505 aa21.21■□□□□ 0.99
SLC3A2-201ENST00000338663 CIZ1Q9ULV3 898 aaPredicted RBP21.21■□□□□ 0.99
SLC3A2-201ENST00000338663 RREB1Q92766 1687 aa21.21■□□□□ 0.99
SLC3A2-201ENST00000338663 USP21Q9UK80 565 aa21.2■□□□□ 0.98
SLC3A2-201ENST00000338663 ATP5J2-PTCD1G3V325 749 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 TRAK2O60296 914 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 HSPA1LP34931 641 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 ZNF831Q5JPB2 1677 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 CYP19A1P11511 503 aaPredicted RBP21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 RBM25P49756 843 aaKnown RBP21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 PDE1AP54750 535 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 ACSBG1Q96GR2 724 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 ZBTB3Q9H5J0 574 aa21.19■□□□□ 0.98
SLC3A2-201ENST00000338663 RHPN1Q8TCX5 695 aa21.18■□□□□ 0.98
SLC3A2-201ENST00000338663 CDC45O75419 566 aa21.17■□□□□ 0.98
SLC3A2-201ENST00000338663 A0A087WZG4 1122 aa21.17■□□□□ 0.98
SLC3A2-201ENST00000338663 MX1P20591 662 aa21.17■□□□□ 0.98
SLC3A2-201ENST00000338663 UBE3BQ7Z3V4 1068 aa21.17■□□□□ 0.98
SLC3A2-201ENST00000338663 COL5A3P25940 1745 aaPredicted RBP21.16■□□□□ 0.98
SLC3A2-201ENST00000338663 MFAP1P55081 439 aaKnown RBP21.16■□□□□ 0.98
SLC3A2-201ENST00000338663 CASP7P55210 303 aa21.16■□□□□ 0.98
SLC3A2-201ENST00000338663 KIF6Q6ZMV9 814 aa21.16■□□□□ 0.98
SLC3A2-201ENST00000338663 TBC1D9Q6ZT07 1266 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms