RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 C10orf71Q711Q0 1435 aa14.65□□□□□ -0.06
SLC28A1-202ENST00000338602 CARMIL3Q8ND23 1372 aa14.65□□□□□ -0.06
SLC28A1-202ENST00000338602 NECTIN2Q92692 538 aa14.65□□□□□ -0.06
SLC28A1-202ENST00000338602 DDX21Q9NR30 783 aaKnown RBP eCLIP14.65□□□□□ -0.06
SLC28A1-202ENST00000338602 MAP3K15Q6ZN16 1313 aa14.64□□□□□ -0.07
SLC28A1-202ENST00000338602 HSPA6P17066 643 aa14.64□□□□□ -0.07
SLC28A1-202ENST00000338602 KRT24Q2M2I5 525 aa14.64□□□□□ -0.07
SLC28A1-202ENST00000338602 DBF4Q9UBU7 674 aaPredicted RBP14.64□□□□□ -0.07
SLC28A1-202ENST00000338602 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.07
SLC28A1-202ENST00000338602 SCN7AQ01118 1682 aa14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 A0A0G2JLW4 131 aa14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 ST5P78524 1137 aa14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 PDIA6Q15084 440 aa14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 NBPF5PQ86XG9 351 aaPredicted RBP14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 CNBD1Q8NA66 436 aa14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 HYPKQ9NX55 129 aa14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
SLC28A1-202ENST00000338602 DPEP1P16444 411 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 GTF2E1P29083 439 aaPredicted RBP14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 PDE6BP35913 854 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 AIMP1Q12904 312 aaKnown RBP14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 HLFQ16534 295 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 CCDC30Q5VVM6 783 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 TPTE2Q6XPS3 522 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 TTLL7Q6ZT98 887 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 COPS6Q7L5N1 327 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 ZBTB3Q9H5J0 574 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 MYH16Q9H6N6 1097 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 PIM2Q9P1W9 311 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 CHPF2Q9P2E5 772 aa14.61□□□□□ -0.07
SLC28A1-202ENST00000338602 H0YIN7 160 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 ANXA1P04083 346 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 HSP90AB3PQ58FF7 597 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 GIGYF2Q6Y7W6 1299 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 XAGE3Q8WTP9 111 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 TSR2Q969E8 191 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 BRIP1Q9BX63 1249 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 NYXQ9GZU5 481 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 GOLGB1Q14789 3259 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 PXDNLA1KZ92 1463 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 KIF13BQ9NQT8 1826 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 PROSER3Q2NL68 480 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 PRR5LQ6MZQ0 368 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 C8orf58Q8NAV2 365 aa14.6□□□□□ -0.07
SLC28A1-202ENST00000338602 BCORQ6W2J9 1755 aa14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 YBX3P16989 372 aaKnown RBP eCLIP14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 TWISTNBQ3B726 338 aaPredicted RBP14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 DALRD3Q5D0E6 543 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 LRP10Q7Z4F1 713 aa14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 C2CD5Q86YS7 1000 aa14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 STK31Q9BXU1 1019 aa14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 WWC3Q9ULE0 1092 aa14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 BCS1LQ9Y276 419 aa14.59□□□□□ -0.07
SLC28A1-202ENST00000338602 FAM177BA6PVY3 158 aa14.58□□□□□ -0.08
SLC28A1-202ENST00000338602 PARP10Q53GL7 1025 aa14.58□□□□□ -0.08
SLC28A1-202ENST00000338602 PPP1R42Q7Z4L9 355 aa14.58□□□□□ -0.08
SLC28A1-202ENST00000338602 FANCIQ9NVI1 1328 aa14.57□□□□□ -0.08
SLC28A1-202ENST00000338602 ATP10DQ9P241 1426 aa14.57□□□□□ -0.08
SLC28A1-202ENST00000338602 GPTP24298 496 aa14.57□□□□□ -0.08
SLC28A1-202ENST00000338602 CHRNA5P30532 468 aa14.57□□□□□ -0.08
SLC28A1-202ENST00000338602 ANKRD13DQ6ZTN6 518 aa14.57□□□□□ -0.08
SLC28A1-202ENST00000338602 MIER1Q8N108 512 aa14.57□□□□□ -0.08
SLC28A1-202ENST00000338602 PLBD2Q8NHP8 589 aa14.57□□□□□ -0.08
SLC28A1-202ENST00000338602 NRXN2Q9P2S2 1712 aa14.56□□□□□ -0.08
SLC28A1-202ENST00000338602 AFDNP55196 1824 aaKnown RBP14.56□□□□□ -0.08
SLC28A1-202ENST00000338602 DDX58O95786 925 aaKnown RBP14.56□□□□□ -0.08
SLC28A1-202ENST00000338602 ZNF34Q8IZ26 560 aa14.56□□□□□ -0.08
SLC28A1-202ENST00000338602 CAPN15O75808 1086 aa14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 KCNA3P22001 575 aa14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 TCIRG1Q13488 830 aa14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 RIC3Q7Z5B4 369 aa14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 CCDC24Q8N4L8 307 aa14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 TSPYL6Q8N831 410 aa14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 TTLL6Q8N841 843 aa14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 ZNF622Q969S3 477 aaKnown RBP eCLIP14.55□□□□□ -0.08
SLC28A1-202ENST00000338602 N4BP2Q86UW6 1770 aaPredicted RBP14.54□□□□□ -0.08
SLC28A1-202ENST00000338602 IBTKQ9P2D0 1353 aaPredicted RBP14.54□□□□□ -0.08
SLC28A1-202ENST00000338602 E9PSI1 815 aa14.54□□□□□ -0.08
SLC28A1-202ENST00000338602 EXOSC9Q06265 439 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-202ENST00000338602 UTP14AQ9BVJ6 771 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-202ENST00000338602 GPBP1L1Q9HC44 474 aaPredicted RBP14.54□□□□□ -0.08
SLC28A1-202ENST00000338602 NUP98P52948 1817 aa14.53□□□□□ -0.08
SLC28A1-202ENST00000338602 SUSD4Q5VX71 490 aa14.53□□□□□ -0.08
SLC28A1-202ENST00000338602 ARHGAP27Q6ZUM4 889 aa14.53□□□□□ -0.08
SLC28A1-202ENST00000338602 CNKSR1Q969H4 720 aa14.53□□□□□ -0.08
SLC28A1-202ENST00000338602 MASTLQ96GX5 879 aa14.53□□□□□ -0.08
SLC28A1-202ENST00000338602 RNF123Q5XPI4 1314 aa14.53□□□□□ -0.08
SLC28A1-202ENST00000338602 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
SLC28A1-202ENST00000338602 STYK1Q6J9G0 422 aa14.52□□□□□ -0.08
SLC28A1-202ENST00000338602 PHAXQ9H814 394 aaKnown RBP14.52□□□□□ -0.08
SLC28A1-202ENST00000338602 UBN2Q6ZU65 1347 aa14.52□□□□□ -0.09
SLC28A1-202ENST00000338602 VAMP4O75379 141 aa14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 SRGNP10124 158 aa14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 NPR1P16066 1061 aa14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 ERFEQ4G0M1 354 aa14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 NLRP10Q86W26 655 aa14.51□□□□□ -0.09
SLC28A1-202ENST00000338602 NUTM1Q86Y26 1132 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms