RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 TEX13AQ9BXU3 409 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 QTRT2Q9H974 415 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 MYH13Q9UKX3 1938 aa6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 SNRPA1P09661 255 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 KRT24Q2M2I5 525 aa6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 COL11A2P13942 1736 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 CNTNAP4Q9C0A0 1308 aa6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 H7C1W4 665 aa6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 SNX21Q969T3 373 aa6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 METTL22Q9BUU2 404 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-201ENST00000337659 CARMIL3Q8ND23 1372 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 C1orf141Q5JVX7 400 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 PLEKHM2Q8IWE5 1019 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 NUTM2FA1L443 756 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 ERVV-1B6SEH8 477 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 IGKV5-2P06315 115 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 IRX6P78412 446 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 PLBD2Q8NHP8 589 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 FMNL2Q96PY5 1086 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 CLEC17AQ6ZS10 378 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 DDX17Q92841 729 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 ZNF512BQ96KM6 892 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 KIF2CQ99661 725 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 SRCIN1Q9C0H9 1055 aa6.75□□□□□ -1.33
PRPF4B-201ENST00000337659 CACNA1SQ13698 1873 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 TTC41PQ6P2S7 1318 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 KCNQ3O43525 872 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 SLC4A2P04920 1241 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 DNAAF4Q8WXU2 420 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 RBM33Q96EV2 1170 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 HDAC5Q9UQL6 1122 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 PALLDQ8WX93 1383 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 CIAO1O76071 339 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 TTC22Q5TAA0 569 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 LARP1Q6PKG0 1096 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 USHBP1Q8N6Y0 703 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 RAPGEF4Q8WZA2 1011 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 NBPF26B4DH59 902 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 PAK3O75914 559 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 GNAI2P04899 355 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 NBPF14Q5TI25 921 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 NBPF10Q6P3W6 841 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 FTSJ3Q8IY81 847 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 NBPF15Q8N660 670 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 COPRSQ9NQ92 184 aa6.74□□□□□ -1.33
PRPF4B-201ENST00000337659 GREB1LQ9C091 1923 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 CSF1RP07333 972 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 GSPT1P15170 499 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 RC3H1Q5TC82 1133 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 MEIS3Q99687 375 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 C10orf71Q711Q0 1435 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 NEURL1BA8MQ27 555 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 ALDH8A1Q9H2A2 487 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 CHPF2Q9P2E5 772 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 PI4K2BQ8TCG2 481 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 USP21Q9UK80 565 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 MSH5O43196 834 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 FOXO4P98177 505 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 HDGFL1Q5TGJ6 251 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 PODXL2Q9NZ53 605 aa6.73□□□□□ -1.33
PRPF4B-201ENST00000337659 NEUROD2Q15784 382 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 NUTM2GQ5VZR2 741 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 ZNF496Q96IT1 587 aaPredicted RBP6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 SLC4A9Q96Q91 983 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 SNED1Q8TER0 1413 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 CYP19A1P11511 503 aaPredicted RBP6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 CNGB1Q14028 1251 aaPredicted RBP6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 ANTXR1Q9H6X2 564 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 IRS2Q9Y4H2 1338 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 MED23Q9ULK4 1368 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 ITPRIPQ8IWB1 547 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 STK31Q9BXU1 1019 aa6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 PDS5AQ29RF7 1337 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-201ENST00000337659 PROSER3Q2NL68 480 aa6.71□□□□□ -1.33
PRPF4B-201ENST00000337659 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.33
PRPF4B-201ENST00000337659 SALL2Q9Y467 1007 aaPredicted RBP6.71□□□□□ -1.33
PRPF4B-201ENST00000337659 GCKRQ14397 625 aa6.71□□□□□ -1.34
PRPF4B-201ENST00000337659 MPRIPQ6WCQ1 1025 aa6.71□□□□□ -1.34
PRPF4B-201ENST00000337659 PHAXQ9H814 394 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-201ENST00000337659 TMED8Q6PL24 325 aaPredicted RBP6.71□□□□□ -1.34
PRPF4B-201ENST00000337659 DHX37Q8IY37 1157 aaKnown RBP6.71□□□□□ -1.34
PRPF4B-201ENST00000337659 CCDC191Q8NCU4 936 aa6.71□□□□□ -1.34
PRPF4B-201ENST00000337659 IL6STP40189 918 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 ZNF34Q8IZ26 560 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 FBXL16Q8N461 479 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 TAOK2Q9UL54 1235 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 HMMRO75330 724 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 XPCQ01831 940 aaPredicted RBP6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 TEFQ10587 303 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 PRDM11Q9NQV5 511 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 ZC3H6P61129 1189 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 TSGA10IPQ3SY00 556 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 HSP90AB4PQ58FF6 505 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 MEX3CQ5U5Q3 659 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 INTS5Q6P9B9 1019 aaKnown RBP6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 PIGBQ92521 554 aa6.7□□□□□ -1.34
PRPF4B-201ENST00000337659 CCDC88AQ3V6T2 1871 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms