RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SLC4A1APQ9BWU0 796 aaKnown RBP10□□□□□ -0.81
TDP1-201ENST00000335725 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
TDP1-201ENST00000335725 BATF3Q9NR55 127 aa10□□□□□ -0.81
TDP1-201ENST00000335725 ORC3Q9UBD5 711 aaPredicted RBP10□□□□□ -0.81
TDP1-201ENST00000335725 SLC8A3P57103 927 aa10□□□□□ -0.81
TDP1-201ENST00000335725 RASA3Q14644 834 aa10□□□□□ -0.81
TDP1-201ENST00000335725 KCNV1Q6PIU1 500 aa10□□□□□ -0.81
TDP1-201ENST00000335725 PANK1Q8TE04 598 aa10□□□□□ -0.81
TDP1-201ENST00000335725 SUN2Q9UH99 717 aa10□□□□□ -0.81
TDP1-201ENST00000335725 PLEKHG4BQ96PX9 1271 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 RBM47A0AV96 593 aaKnown RBP9.99□□□□□ -0.81
TDP1-201ENST00000335725 TBC1D8O95759 1140 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 RCSD1Q6JBY9 416 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 ATL2Q8NHH9 583 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 KIF9Q9HAQ2 790 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 SRGAP3O43295 1099 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 NUTM2GQ5VZR2 741 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 MIPOL1Q8TD10 442 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 KAT2BQ92831 832 aa9.99□□□□□ -0.81
TDP1-201ENST00000335725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.99□□□□□ -0.81
TDP1-201ENST00000335725 RAB27AP51159 221 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 CCDC178Q5BJE1 867 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 C17orf50Q8WW18 174 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 VPS18Q9P253 973 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 CEP126Q9P2H0 1117 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 ERBB3P21860 1342 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 LIG3P49916 1009 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 WLSQ5T9L3 541 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 HECW1Q76N89 1606 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 CUX1P39880 1505 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 CLASP1Q7Z460 1538 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 EPB41L2O43491 1005 aaKnown RBP9.98□□□□□ -0.81
TDP1-201ENST00000335725 EZRP15311 586 aaKnown RBP9.98□□□□□ -0.81
TDP1-201ENST00000335725 INPP5BP32019 993 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 CC2D1AQ6P1N0 951 aaPredicted RBP9.98□□□□□ -0.81
TDP1-201ENST00000335725 C3orf20Q8ND61 904 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 ZCRB1Q8TBF4 217 aaKnown RBP9.98□□□□□ -0.81
TDP1-201ENST00000335725 ZKSCAN4Q969J2 545 aaPredicted RBP9.98□□□□□ -0.81
TDP1-201ENST00000335725 UBA5Q9GZZ9 404 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 CECR2Q9BXF3 1484 aa9.98□□□□□ -0.81
TDP1-201ENST00000335725 ERC2O15083 957 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 CCDC192P0DO97 292 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 CEP112Q8N8E3 955 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 PARD3BQ8TEW8 1205 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 TMX3Q96JJ7 454 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 KCND1Q9NSA2 647 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 EME2A4GXA9 379 aaPredicted RBP9.97□□□□□ -0.81
TDP1-201ENST00000335725 EFCAB8A8MWE9 144 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 RTN3O95197 1032 aaPredicted RBP9.97□□□□□ -0.81
TDP1-201ENST00000335725 CDR1P51861 262 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 SFSWAPQ12872 951 aaKnown RBP9.97□□□□□ -0.81
TDP1-201ENST00000335725 LRMPQ12912 555 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 PKP1Q13835 747 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 SPATA21Q7Z572 469 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 TRIM42Q8IWZ5 723 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.812e-7■■■■□ 20.2
TDP1-201ENST00000335725 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
TDP1-201ENST00000335725 EBAG9O00559 213 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 TPP2P29144 1249 aaPredicted RBP9.97□□□□□ -0.81
TDP1-201ENST00000335725 PLEKHO1Q53GL0 409 aaPredicted RBP9.97□□□□□ -0.81
TDP1-201ENST00000335725 BMP2KLQ5H9B9 411 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 FOXR1Q6PIV2 292 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 CCDC50Q8IVM0 306 aa9.97□□□□□ -0.81
TDP1-201ENST00000335725 NAA25Q14CX7 972 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 FBXW10Q5XX13 1052 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 SDCCAG8Q86SQ7 713 aaPredicted RBP9.96□□□□□ -0.81
TDP1-201ENST00000335725 ZDHHC9Q9Y397 364 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 GOLGA6L10A6NI86 522 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 GPR161Q8N6U8 529 aaKnown RBP9.96□□□□□ -0.81
TDP1-201ENST00000335725 TDRD7Q8NHU6 1098 aaKnown RBP9.96□□□□□ -0.81
TDP1-201ENST00000335725 ZBTB10Q96DT7 871 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 BICD1Q96G01 975 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 LMCD1Q9NZU5 365 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 AKAP2Q9Y2D5 859 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 BCORL1Q5H9F3 1711 aa9.96□□□□□ -0.81
TDP1-201ENST00000335725 TOP2AP11388 1531 aaKnown RBP9.96□□□□□ -0.82
TDP1-201ENST00000335725 SHROOM2Q13796 1616 aa9.96□□□□□ -0.82
TDP1-201ENST00000335725 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
TDP1-201ENST00000335725 LAMB3Q13751 1172 aa9.96□□□□□ -0.82
TDP1-201ENST00000335725 ZNF280DQ6N043 979 aa9.96□□□□□ -0.82
TDP1-201ENST00000335725 FAM200AQ8TCP9 573 aa9.96□□□□□ -0.82
TDP1-201ENST00000335725 ANKRD65E5RJM6 399 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 ZSCAN9O15535 394 aaPredicted RBP9.95□□□□□ -0.82
TDP1-201ENST00000335725 HSP90AB2PQ58FF8 381 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 EZH1Q92800 747 aaPredicted RBP9.95□□□□□ -0.82
TDP1-201ENST00000335725 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
TDP1-201ENST00000335725 SNW1Q13573 536 aaKnown RBP9.95□□□□□ -0.82
TDP1-201ENST00000335725 CCDC93Q567U6 631 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 TAX1BP1Q86VP1 789 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 AMOTL1Q8IY63 956 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 TEX14Q8IWB6 1497 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 FYCO1Q9BQS8 1478 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 PRXQ9BXM0 1461 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 SEC31AO94979 1220 aaKnown RBP9.95□□□□□ -0.82
TDP1-201ENST00000335725 TMED1Q13445 227 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 RSRC1Q96IZ7 334 aaKnown RBP9.95□□□□□ -0.82
TDP1-201ENST00000335725 TRIM5Q9C035 493 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
TDP1-201ENST00000335725 CAMSAP2Q08AD1 1489 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 GOLGA6L19H0YKK7 550 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms