RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
LIMK2-201ENST00000331728 ECHDC1Q9NTX5 307 aa10.39□□□□□ -0.75
LIMK2-201ENST00000331728 H3BQV1 296 aa10.39□□□□□ -0.75
LIMK2-201ENST00000331728 DMTNQ08495 405 aa10.39□□□□□ -0.75
LIMK2-201ENST00000331728 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
LIMK2-201ENST00000331728 ZNF530Q6P9A1 599 aaPredicted RBP10.39□□□□□ -0.75
LIMK2-201ENST00000331728 TMEM87AQ8NBN3 555 aa10.39□□□□□ -0.75
LIMK2-201ENST00000331728 CHPF2Q9P2E5 772 aa10.39□□□□□ -0.75
LIMK2-201ENST00000331728 HIP1O00291 1037 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 DTNBO60941 627 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 KDM4AO75164 1064 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 ZRSR1Q15695 479 aaKnown RBP10.38□□□□□ -0.75
LIMK2-201ENST00000331728 MAP3K11Q16584 847 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 BLOC1S2Q6QNY1 142 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 JARID2Q92833 1246 aaPredicted RBP10.38□□□□□ -0.75
LIMK2-201ENST00000331728 SPTLC3Q9NUV7 552 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 TCHHQ07283 1943 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 CBX1P83916 185 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 AIMP1Q12904 312 aaKnown RBP10.38□□□□□ -0.75
LIMK2-201ENST00000331728 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 ZNF710Q8N1W2 664 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 TNMDQ9H2S6 317 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
LIMK2-201ENST00000331728 BTBD11A6QL63 1104 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 DDX58O95786 925 aaKnown RBP10.37□□□□□ -0.75
LIMK2-201ENST00000331728 NBPF7P0C2Y1 421 aaPredicted RBP10.37□□□□□ -0.75
LIMK2-201ENST00000331728 HOXC9P31274 260 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 STK3Q13188 491 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 CAMK4Q16566 473 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 TRIM5Q9C035 493 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 TMEM2Q9UHN6 1383 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 RUFY3Q7L099 469 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 SIL1Q9H173 461 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 TTC41PQ6P2S7 1318 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 SALL3Q9BXA9 1300 aa10.37□□□□□ -0.75
LIMK2-201ENST00000331728 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 ANKRD1Q15327 319 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 PDCL2Q8N4E4 241 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 OVOS2A0A0J9YW53 1432 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 OVOS2Q6IE36 1432 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 FAM177BA6PVY3 158 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 PLEKHO1Q53GL0 409 aaPredicted RBP10.36□□□□□ -0.75
LIMK2-201ENST00000331728 EVI5LQ96CN4 794 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 SPATA32Q96LK8 384 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 LSG1Q9H089 658 aaKnown RBP10.36□□□□□ -0.75
LIMK2-201ENST00000331728 BCL2L12Q9HB09 334 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 VPS53Q5VIR6 699 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 GTPBP4Q9BZE4 634 aaKnown RBP10.36□□□□□ -0.75
LIMK2-201ENST00000331728 BABAM1Q9NWV8 329 aa10.36□□□□□ -0.75
LIMK2-201ENST00000331728 RBM8AQ9Y5S9 174 aaKnown RBP10.36□□□□□ -0.75
LIMK2-201ENST00000331728 RPAP1Q9BWH6 1393 aaPredicted RBP10.36□□□□□ -0.75
LIMK2-201ENST00000331728 ZSCAN20P17040 1043 aaPredicted RBP10.35□□□□□ -0.75
LIMK2-201ENST00000331728 CKAP2LQ8IYA6 745 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 IL17RAQ96F46 866 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 CCDC8Q9H0W5 538 aaPredicted RBP10.35□□□□□ -0.75
LIMK2-201ENST00000331728 PA2G4Q9UQ80 394 aaKnown RBP10.35□□□□□ -0.75
LIMK2-201ENST00000331728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.35□□□□□ -0.75
LIMK2-201ENST00000331728 RIC3Q7Z5B4 369 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 TCEANC2Q96MN5 208 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 BOLA2Q9H3K6 86 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 FOSBP53539 338 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 PI4K2BQ8TCG2 481 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 IL25Q9H293 177 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 DBF4Q9UBU7 674 aaPredicted RBP10.35□□□□□ -0.75
LIMK2-201ENST00000331728 MAP3K2Q9Y2U5 619 aa10.35□□□□□ -0.75
LIMK2-201ENST00000331728 CCDC9Q9Y3X0 531 aaKnown RBP10.35□□□□□ -0.75
LIMK2-201ENST00000331728 BECN2A8MW95 431 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 PDIA4P13667 645 aaKnown RBP10.34□□□□□ -0.75
LIMK2-201ENST00000331728 MPRIPQ6WCQ1 1025 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 RICTORQ6R327 1708 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 CCDC171Q6TFL3 1326 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 KIAA1524Q8TCG1 905 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 FAM200AQ8TCP9 573 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 SCAND2PQ9GZW5 306 aaPredicted RBP10.34□□□□□ -0.75
LIMK2-201ENST00000331728 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
LIMK2-201ENST00000331728 ITSN1Q15811 1721 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 USP31Q70CQ4 1352 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 PSME1Q06323 249 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 MTMR6Q9Y217 621 aa10.34□□□□□ -0.75
LIMK2-201ENST00000331728 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
LIMK2-201ENST00000331728 LTKP29376 864 aa10.33□□□□□ -0.76
LIMK2-201ENST00000331728 CEBPAP49715 358 aaPredicted RBP10.33□□□□□ -0.76
LIMK2-201ENST00000331728 PTH1RQ03431 593 aa10.33□□□□□ -0.76
LIMK2-201ENST00000331728 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
LIMK2-201ENST00000331728 LARGE1O95461 756 aa10.33□□□□□ -0.76
LIMK2-201ENST00000331728 PYCARDQ9ULZ3 195 aa10.33□□□□□ -0.76
LIMK2-201ENST00000331728 NMIQ13287 307 aaPredicted RBP10.32□□□□□ -0.76
LIMK2-201ENST00000331728 POLA2Q14181 598 aa10.32□□□□□ -0.76
LIMK2-201ENST00000331728 ATP2B3Q16720 1220 aa10.32□□□□□ -0.76
LIMK2-201ENST00000331728 HYPKQ9NX55 129 aa10.32□□□□□ -0.76
LIMK2-201ENST00000331728 PODXL2Q9NZ53 605 aa10.32□□□□□ -0.76
LIMK2-201ENST00000331728 CEBPZQ03701 1054 aaKnown RBP10.32□□□□□ -0.76
LIMK2-201ENST00000331728 TYRO3Q06418 890 aa10.32□□□□□ -0.76
LIMK2-201ENST00000331728 FAM173BQ6P4H8 233 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms