RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 GTF2A1P52655 376 aaPredicted RBP9.9□□□□□ -0.82
SKA2-201ENST00000330137 C16orf71Q8IYS4 520 aaPredicted RBP9.9□□□□□ -0.82
SKA2-201ENST00000330137 FBXO18Q8NFZ0 1043 aa9.9□□□□□ -0.82
SKA2-201ENST00000330137 CACTINQ8WUQ7 758 aaKnown RBP9.9□□□□□ -0.82
SKA2-201ENST00000330137 EXOC4Q96A65 974 aa9.9□□□□□ -0.82
SKA2-201ENST00000330137 CBX8Q9HC52 389 aa9.9□□□□□ -0.82
SKA2-201ENST00000330137 TULP4Q9NRJ4 1543 aa9.9□□□□□ -0.82
SKA2-201ENST00000330137 MYO1CO00159 1063 aa9.9□□□□□ -0.83
SKA2-201ENST00000330137 GUCY2CP25092 1073 aa9.9□□□□□ -0.83
SKA2-201ENST00000330137 CHMLP26374 656 aa9.9□□□□□ -0.83
SKA2-201ENST00000330137 PLA2G4AP47712 749 aa9.9□□□□□ -0.83
SKA2-201ENST00000330137 TWISTNBQ3B726 338 aaPredicted RBP9.9□□□□□ -0.83
SKA2-201ENST00000330137 TMCO3Q6UWJ1 677 aa9.9□□□□□ -0.83
SKA2-201ENST00000330137 TTC14Q96N46 770 aa9.9□□□□□ -0.83
SKA2-201ENST00000330137 ERBB3P21860 1342 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 RPS6KA5O75582 802 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 BRD2P25440 801 aaKnown RBP9.89□□□□□ -0.83
SKA2-201ENST00000330137 CCAR2Q8N163 923 aaKnown RBP9.89□□□□□ -0.83
SKA2-201ENST00000330137 SCAND2PQ9GZW5 306 aaPredicted RBP9.89□□□□□ -0.83
SKA2-201ENST00000330137 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 CHD2O14647 1828 aaKnown RBP9.89□□□□□ -0.83
SKA2-201ENST00000330137 ARHGEF28Q8N1W1 1705 aaKnown RBP9.89□□□□□ -0.83
SKA2-201ENST00000330137 PSEN1P49768 467 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 KRT85P78386 507 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 LRMPQ12912 555 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 NAA30Q147X3 362 aaPredicted RBP9.89□□□□□ -0.83
SKA2-201ENST00000330137 RPAINQ86UA6 219 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 ATG3Q9NT62 314 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 MROH2AA6NES4 1674 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 NPHP3Q7Z494 1330 aa9.89□□□□□ -0.83
SKA2-201ENST00000330137 A0A1B0GUL7 405 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 CLCN6P51797 869 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 ZSCAN26Q16670 478 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 SRLQ86TD4 932 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 CTAGE5O15320 804 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 PDCP20941 246 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 SECISBP2LQ93073 1101 aaKnown RBP9.88□□□□□ -0.83
SKA2-201ENST00000330137 TNMDQ9H2S6 317 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 CLSTN2Q9H4D0 955 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 RNF216Q9NWF9 866 aaPredicted RBP9.88□□□□□ -0.83
SKA2-201ENST00000330137 POLKQ9UBT6 870 aa9.88□□□□□ -0.83
SKA2-201ENST00000330137 NRDCO43847 1150 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 GIGYF1O75420 1035 aaPredicted RBP9.87□□□□□ -0.83
SKA2-201ENST00000330137 CCDC158Q5M9N0 1113 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 KRBA2Q6ZNG9 492 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 PALD1Q9ULE6 856 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 MTMR6Q9Y217 621 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 PHLPP2Q6ZVD8 1323 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 TTC21AQ8NDW8 1320 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 PREX1Q8TCU6 1659 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 FIBPO43427 364 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 SKILP12757 684 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 ANO6Q4KMQ2 910 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 SYT10Q6XYQ8 523 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 LUZP1Q86V48 1076 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 OTUD7AQ8TE49 926 aaPredicted RBP9.87□□□□□ -0.83
SKA2-201ENST00000330137 TM6SF1Q9BZW5 370 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 OSBPL5Q9H0X9 879 aaPredicted RBP9.87□□□□□ -0.83
SKA2-201ENST00000330137 KIF20BQ96Q89 1820 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 PLEKHG2Q9H7P9 1386 aa9.87□□□□□ -0.83
SKA2-201ENST00000330137 YTHDC2Q9H6S0 1430 aaKnown RBP9.87□□□□□ -0.83
SKA2-201ENST00000330137 EFCAB8A8MWE9 144 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 MAGEA9P43362 315 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 ZNF165P49910 485 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
SKA2-201ENST00000330137 JAKMIP3Q5VZ66 844 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
SKA2-201ENST00000330137 SUGP1Q8IWZ8 645 aaKnown RBP9.86□□□□□ -0.83
SKA2-201ENST00000330137 ANO2Q9NQ90 1003 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.86□□□□□ -0.83
SKA2-201ENST00000330137 LRRFIP2Q9Y608 721 aaKnown RBP9.86□□□□□ -0.83
SKA2-201ENST00000330137 CCZ1BP86790 482 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 CCZ1P86791 482 aaPredicted RBP9.86□□□□□ -0.83
SKA2-201ENST00000330137 ZNF592Q92610 1267 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 CHMP4AQ9BY43 222 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 NRBP1Q9UHY1 535 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 ARHGEF10O15013 1369 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 LMTK3Q96Q04 1460 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 GOLGA6L19H0YKK7 550 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 CCDC150Q8NCX0 1101 aa9.86□□□□□ -0.83
SKA2-201ENST00000330137 TUBB4BP68371 445 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 SNW1Q13573 536 aaKnown RBP9.85□□□□□ -0.83
SKA2-201ENST00000330137 TERF2IPQ9NYB0 399 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 ORC3Q9UBD5 711 aaPredicted RBP9.85□□□□□ -0.83
SKA2-201ENST00000330137 A0A1W2PP64 1363 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 MROH1Q8NDA8 1641 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 SOX12O15370 315 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 ACTN2P35609 894 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 DNM1Q05193 864 aaKnown RBP9.85□□□□□ -0.83
SKA2-201ENST00000330137 TSPYL6Q8N831 410 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 CCDC191Q8NCU4 936 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 UBXN4Q92575 508 aa9.85□□□□□ -0.83
SKA2-201ENST00000330137 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
SKA2-201ENST00000330137 KIF1CO43896 1103 aaKnown RBP9.84□□□□□ -0.83
SKA2-201ENST00000330137 CPP00450 1065 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 IQCB1Q15051 598 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 CCDC144BQ3MJ40 725 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 TTC41PQ6P2S7 1318 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms