RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SPG7Q9UQ90 795 aa20.02■□□□□ 0.79
SSH1-201ENST00000326470 USP42Q9H9J4 1324 aaKnown RBP20.01■□□□□ 0.79
SSH1-201ENST00000326470 SRGAP3O43295 1099 aa20.01■□□□□ 0.79
SSH1-201ENST00000326470 TAF7Q15545 349 aaPredicted RBP20.01■□□□□ 0.79
SSH1-201ENST00000326470 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
SSH1-201ENST00000326470 IL17REQ8NFR9 667 aa20.01■□□□□ 0.79
SSH1-201ENST00000326470 ZSCAN31Q96LW9 406 aaPredicted RBP20.01■□□□□ 0.79
SSH1-201ENST00000326470 KCNF1Q9H3M0 494 aa20.01■□□□□ 0.79
SSH1-201ENST00000326470 SH2B1Q9NRF2 756 aaPredicted RBP20.01■□□□□ 0.79
SSH1-201ENST00000326470 CPA1P15085 419 aa20■□□□□ 0.79
SSH1-201ENST00000326470 PHAXQ9H814 394 aaKnown RBP20■□□□□ 0.79
SSH1-201ENST00000326470 HDGFL1Q5TGJ6 251 aa20■□□□□ 0.79
SSH1-201ENST00000326470 TM6SF1Q9BZW5 370 aa20■□□□□ 0.79
SSH1-201ENST00000326470 PDRG1Q9NUG6 133 aa20■□□□□ 0.79
SSH1-201ENST00000326470 TTC41PQ6P2S7 1318 aa19.99■□□□□ 0.79
SSH1-201ENST00000326470 CRYBG1Q9Y4K1 1723 aa19.99■□□□□ 0.79
SSH1-201ENST00000326470 CCDC192P0DO97 292 aa19.99■□□□□ 0.79
SSH1-201ENST00000326470 HSP90AB4PQ58FF6 505 aa19.99■□□□□ 0.79
SSH1-201ENST00000326470 RUFY2Q8WXA3 655 aa19.99■□□□□ 0.79
SSH1-201ENST00000326470 DIAPH3Q9NSV4 1193 aa19.99■□□□□ 0.79
SSH1-201ENST00000326470 PYCARDQ9ULZ3 195 aa19.99■□□□□ 0.79
SSH1-201ENST00000326470 GOLGA6L6A8MZA4 724 aa19.98■□□□□ 0.79
SSH1-201ENST00000326470 GLRX3O76003 335 aaKnown RBP19.98■□□□□ 0.79
SSH1-201ENST00000326470 UTP14CQ5TAP6 766 aaKnown RBP19.98■□□□□ 0.79
SSH1-201ENST00000326470 THEMISQ8N1K5 641 aaPredicted RBP19.98■□□□□ 0.79
SSH1-201ENST00000326470 KCNB2Q92953 911 aa19.98■□□□□ 0.79
SSH1-201ENST00000326470 BCL2L12Q9HB09 334 aa19.98■□□□□ 0.79
SSH1-201ENST00000326470 ZSWIM6Q9HCJ5 1215 aa19.98■□□□□ 0.79
SSH1-201ENST00000326470 PRDM10Q9NQV6 1147 aa19.98■□□□□ 0.79
SSH1-201ENST00000326470 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
SSH1-201ENST00000326470 SLIT1O75093 1534 aa19.98■□□□□ 0.79
SSH1-201ENST00000326470 PTPRUQ92729 1446 aa19.97■□□□□ 0.79
SSH1-201ENST00000326470 JAKMIP1Q96N16 626 aaKnown RBP19.97■□□□□ 0.79
SSH1-201ENST00000326470 CYP46A1Q9Y6A2 500 aa19.97■□□□□ 0.79
SSH1-201ENST00000326470 NBPF7P0C2Y1 421 aaPredicted RBP19.97■□□□□ 0.79
SSH1-201ENST00000326470 LTKP29376 864 aa19.97■□□□□ 0.79
SSH1-201ENST00000326470 DMTNQ08495 405 aa19.97■□□□□ 0.79
SSH1-201ENST00000326470 CHAF1AQ13111 956 aaPredicted RBP19.97■□□□□ 0.79
SSH1-201ENST00000326470 ADCK5Q3MIX3 580 aa19.97■□□□□ 0.79
SSH1-201ENST00000326470 ZSCAN20P17040 1043 aaPredicted RBP19.96■□□□□ 0.79
SSH1-201ENST00000326470 PTH1RQ03431 593 aa19.96■□□□□ 0.79
SSH1-201ENST00000326470 ARHGAP23Q9P227 1491 aa19.96■□□□□ 0.79
SSH1-201ENST00000326470 ST3GAL1Q11201 340 aa19.96■□□□□ 0.79
SSH1-201ENST00000326470 FAM200AQ8TCP9 573 aa19.96■□□□□ 0.79
SSH1-201ENST00000326470 FAM177BA6PVY3 158 aa19.95■□□□□ 0.78
SSH1-201ENST00000326470 PDIA4P13667 645 aaKnown RBP19.95■□□□□ 0.78
SSH1-201ENST00000326470 PPP4R3BQ5MIZ7 849 aa19.95■□□□□ 0.78
SSH1-201ENST00000326470 PRPF40BQ6NWY9 871 aaKnown RBP19.95■□□□□ 0.78
SSH1-201ENST00000326470 VPS37CA5D8V6 355 aaPredicted RBP19.95■□□□□ 0.78
SSH1-201ENST00000326470 ME3Q16798 604 aa19.95■□□□□ 0.78
SSH1-201ENST00000326470 SPC24Q8NBT2 197 aa19.95■□□□□ 0.78
SSH1-201ENST00000326470 BEND3Q5T5X7 828 aa19.94■□□□□ 0.78
SSH1-201ENST00000326470 RIOK3O14730 519 aaKnown RBP19.94■□□□□ 0.78
SSH1-201ENST00000326470 ELP1O95163 1332 aa19.93■□□□□ 0.78
SSH1-201ENST00000326470 KRT85P78386 507 aa19.93■□□□□ 0.78
SSH1-201ENST00000326470 NECTIN1Q15223 517 aa19.93■□□□□ 0.78
SSH1-201ENST00000326470 TTC6Q86TZ1 520 aa19.93■□□□□ 0.78
SSH1-201ENST00000326470 MAP3K11Q16584 847 aa19.93■□□□□ 0.78
SSH1-201ENST00000326470 DNAAF4Q8WXU2 420 aa19.93■□□□□ 0.78
SSH1-201ENST00000326470 DTNBO60941 627 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 CBX1P83916 185 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 CLASRPQ8N2M8 674 aaKnown RBP19.92■□□□□ 0.78
SSH1-201ENST00000326470 PDCL2Q8N4E4 241 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 NUP62CLQ9H1M0 184 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 NWD1Q149M9 1564 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 CTIFO43310 598 aaKnown RBP19.92■□□□□ 0.78
SSH1-201ENST00000326470 OS9Q13438 667 aaPredicted RBP19.92■□□□□ 0.78
SSH1-201ENST00000326470 ATP2B3Q16720 1220 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 LARP1BQ659C4 914 aaKnown RBP19.92■□□□□ 0.78
SSH1-201ENST00000326470 ANKRD7Q92527 254 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 ECHDC1Q9NTX5 307 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 MRVI1Q9Y6F6 885 aa19.92■□□□□ 0.78
SSH1-201ENST00000326470 CCDC171Q6TFL3 1326 aa19.91■□□□□ 0.78
SSH1-201ENST00000326470 ZKSCAN1P17029 563 aaPredicted RBP19.91■□□□□ 0.78
SSH1-201ENST00000326470 TYRO3Q06418 890 aa19.91■□□□□ 0.78
SSH1-201ENST00000326470 NECAB1Q8N987 351 aa19.91■□□□□ 0.78
SSH1-201ENST00000326470 HOXC9P31274 260 aa19.91■□□□□ 0.78
SSH1-201ENST00000326470 MTX1Q13505 466 aa19.91■□□□□ 0.78
SSH1-201ENST00000326470 NGDNQ8NEJ9 315 aaKnown RBP19.91■□□□□ 0.78
SSH1-201ENST00000326470 PI4KAP2A4QPH2 592 aa19.9■□□□□ 0.78
SSH1-201ENST00000326470 EIF2S2P20042 333 aaKnown RBP19.9■□□□□ 0.78
SSH1-201ENST00000326470 PI4KAP1Q8N8J0 262 aa19.9■□□□□ 0.78
SSH1-201ENST00000326470 TPCN1Q9ULQ1 816 aa19.9■□□□□ 0.78
SSH1-201ENST00000326470 LIG1P18858 919 aa19.9■□□□□ 0.78
SSH1-201ENST00000326470 PDCP20941 246 aa19.9■□□□□ 0.78
SSH1-201ENST00000326470 PTGS1P23219 599 aa19.9■□□□□ 0.78
SSH1-201ENST00000326470 HOXB7P09629 217 aa19.89■□□□□ 0.77
SSH1-201ENST00000326470 EVI5LQ96CN4 794 aa19.89■□□□□ 0.77
SSH1-201ENST00000326470 GPATCH3Q96I76 525 aa19.89■□□□□ 0.77
SSH1-201ENST00000326470 GTPBP4Q9BZE4 634 aaKnown RBP19.89■□□□□ 0.77
SSH1-201ENST00000326470 DIP2AQ14689 1571 aa19.89■□□□□ 0.77
SSH1-201ENST00000326470 CREB3L3Q68CJ9 461 aa19.88■□□□□ 0.77
SSH1-201ENST00000326470 CDC37L1Q7L3B6 337 aa19.88■□□□□ 0.77
SSH1-201ENST00000326470 CHMP4AQ9BY43 222 aa19.88■□□□□ 0.77
SSH1-201ENST00000326470 CHPF2Q9P2E5 772 aa19.88■□□□□ 0.77
SSH1-201ENST00000326470 RBM8AQ9Y5S9 174 aaKnown RBP19.88■□□□□ 0.77
SSH1-201ENST00000326470 EIF4A1P60842 406 aaKnown RBP19.88■□□□□ 0.77
SSH1-201ENST00000326470 CAMK4Q16566 473 aa19.88■□□□□ 0.77
SSH1-201ENST00000326470 LUZP1Q86V48 1076 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms