RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PREX2Q70Z35 1606 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 TNNT1P13805 278 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 TTC39AQ5SRH9 613 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 IL17REQ8NFR9 667 aa18.01■□□□□ 0.47
VARS2-201ENST00000321897 NUTM2BA6NNL0 878 aaPredicted RBP18■□□□□ 0.47
VARS2-201ENST00000321897 NUTM2EB1AL46 878 aaPredicted RBP18■□□□□ 0.47
VARS2-201ENST00000321897 STX6O43752 255 aa18■□□□□ 0.47
VARS2-201ENST00000321897 UNC5CLQ8IV45 518 aa18■□□□□ 0.47
VARS2-201ENST00000321897 NUTM2AQ8IVF1 878 aaPredicted RBP18■□□□□ 0.47
VARS2-201ENST00000321897 CEP126Q9P2H0 1117 aa18■□□□□ 0.47
VARS2-201ENST00000321897 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.477e-8■□□□□ 9.4
VARS2-201ENST00000321897 USP48Q86UV5 1035 aa18■□□□□ 0.47
VARS2-201ENST00000321897 DNM1Q05193 864 aaKnown RBP17.99■□□□□ 0.47
VARS2-201ENST00000321897 LARP1Q6PKG0 1096 aaKnown RBP17.99■□□□□ 0.47
VARS2-201ENST00000321897 SMC2O95347 1197 aa17.99■□□□□ 0.47
VARS2-201ENST00000321897 ISM2Q6H9L7 571 aa17.99■□□□□ 0.47
VARS2-201ENST00000321897 FLT4P35916 1363 aa17.99■□□□□ 0.47
VARS2-201ENST00000321897 PIK3R4Q99570 1358 aa17.99■□□□□ 0.47
VARS2-201ENST00000321897 GCP02774 474 aa17.99■□□□□ 0.47
VARS2-201ENST00000321897 AK2P54819 239 aa17.99■□□□□ 0.47
VARS2-201ENST00000321897 CPLX2Q6PUV4 134 aaKnown RBP17.99■□□□□ 0.47
VARS2-201ENST00000321897 KINO60870 393 aaKnown RBP17.98■□□□□ 0.47
VARS2-201ENST00000321897 PDCP20941 246 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 MCM5P33992 734 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 TMEM63CQ9P1W3 806 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 KDM5AP29375 1690 aaKnown RBP17.98■□□□□ 0.47
VARS2-201ENST00000321897 POLR3GO15318 223 aaPredicted RBP17.98■□□□□ 0.47
VARS2-201ENST00000321897 PDE4CQ08493 712 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 TRIM29Q14134 588 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 CCDC183Q5T5S1 534 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 AKAP17AQ02040 695 aaKnown RBP17.98■□□□□ 0.47
VARS2-201ENST00000321897 STK38Q15208 465 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 NUP62CLQ9H1M0 184 aa17.98■□□□□ 0.47
VARS2-201ENST00000321897 RBM8AQ9Y5S9 174 aaKnown RBP17.98■□□□□ 0.47
VARS2-201ENST00000321897 LETM1O95202 739 aaPredicted RBP17.97■□□□□ 0.47
VARS2-201ENST00000321897 TRPM2O94759 1503 aa17.97■□□□□ 0.47
VARS2-201ENST00000321897 HSPA2P54652 639 aa17.97■□□□□ 0.47
VARS2-201ENST00000321897 TPM3P06753 285 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 LMBR1LQ6UX01 489 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 SMAP1Q8IYB5 467 aaPredicted RBP17.96■□□□□ 0.47
VARS2-201ENST00000321897 GOLGA6L1Q8N7Z2 621 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 CHD1O14646 1710 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 CCDC158Q5M9N0 1113 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 TTLL5Q6EMB2 1281 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 CCDC129Q6ZRS4 1044 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 BRF1Q92994 677 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 FAM227BQ96M60 508 aa17.96■□□□□ 0.47
VARS2-201ENST00000321897 CLTCL1P53675 1640 aa17.96■□□□□ 0.46
VARS2-201ENST00000321897 PRIMPOLQ96LW4 560 aa17.95■□□□□ 0.46
VARS2-201ENST00000321897 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
VARS2-201ENST00000321897 SYNMO15061 1565 aa17.95■□□□□ 0.46
VARS2-201ENST00000321897 GRM8O00222 908 aa17.95■□□□□ 0.46
VARS2-201ENST00000321897 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
VARS2-201ENST00000321897 BIN1O00499 593 aa17.95■□□□□ 0.46
VARS2-201ENST00000321897 NUP133Q8WUM0 1156 aa17.95■□□□□ 0.46
VARS2-201ENST00000321897 BICC1Q9H694 974 aaKnown RBP17.95■□□□□ 0.46
VARS2-201ENST00000321897 ABCC4O15439 1325 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 GTF2F1P35269 517 aaKnown RBP eCLIP17.94■□□□□ 0.46
VARS2-201ENST00000321897 NMIQ13287 307 aaPredicted RBP17.94■□□□□ 0.46
VARS2-201ENST00000321897 LMBRD1Q9NUN5 540 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 HIP1O00291 1037 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
VARS2-201ENST00000321897 GPS2Q13227 327 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 IQSEC3Q9UPP2 1182 aaPredicted RBP17.94■□□□□ 0.46
VARS2-201ENST00000321897 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 CCDC186Q7Z3E2 898 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 PDILTQ8N807 584 aa17.94■□□□□ 0.46
VARS2-201ENST00000321897 ARGLU1Q9NWB6 273 aaPredicted RBP17.94■□□□□ 0.46
VARS2-201ENST00000321897 POLR3DP05423 398 aaPredicted RBP17.93■□□□□ 0.46
VARS2-201ENST00000321897 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
VARS2-201ENST00000321897 SOS1Q07889 1333 aaPredicted RBP17.93■□□□□ 0.46
VARS2-201ENST00000321897 TIMM10P62072 90 aa17.93■□□□□ 0.46
VARS2-201ENST00000321897 MAP3K11Q16584 847 aa17.93■□□□□ 0.46
VARS2-201ENST00000321897 EDC4Q6P2E9 1401 aaKnown RBP17.93■□□□□ 0.46
VARS2-201ENST00000321897 HYPKQ9NX55 129 aa17.93■□□□□ 0.46
VARS2-201ENST00000321897 RTL1A6NKG5 1358 aa17.93■□□□□ 0.46
VARS2-201ENST00000321897 KIF6Q6ZMV9 814 aa17.93■□□□□ 0.46
VARS2-201ENST00000321897 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
VARS2-201ENST00000321897 ZFYVE9O95405 1425 aa17.92■□□□□ 0.46
VARS2-201ENST00000321897 METTL24Q5JXM2 366 aa17.92■□□□□ 0.46
VARS2-201ENST00000321897 BRPF1P55201 1214 aaPredicted RBP17.92■□□□□ 0.46
VARS2-201ENST00000321897 PROSER3Q2NL68 480 aa17.92■□□□□ 0.46
VARS2-201ENST00000321897 ADAMTS2O95450 1211 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
VARS2-201ENST00000321897 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 ZFYVE16Q7Z3T8 1539 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 PTPN14Q15678 1187 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 PPP1R9BQ96SB3 815 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms