RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 NEXNQ0ZGT2 675 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 LARP1Q6PKG0 1096 aaKnown RBP9.28□□□□□ -0.92
IFT88-201ENST00000319980 CRYBG1Q9Y4K1 1723 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 IGKV5-2P06315 115 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 HSP90AB4PQ58FF6 505 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 UNC5CLQ8IV45 518 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 CHMP5Q9NZZ3 219 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 HDAC5Q9UQL6 1122 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 PCDH11XQ9BZA7 1347 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 PCDH11YQ9BZA8 1340 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 IL2RBP14784 551 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 MTX1Q13505 466 aa9.28□□□□□ -0.92
IFT88-201ENST00000319980 PA2G4Q9UQ80 394 aaKnown RBP9.28□□□□□ -0.92
IFT88-201ENST00000319980 MAP4K4O95819 1239 aaPredicted RBP9.27□□□□□ -0.93
IFT88-201ENST00000319980 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
IFT88-201ENST00000319980 SUCLG2Q96I99 432 aa9.27□□□□□ -0.93
IFT88-201ENST00000319980 MYD88Q99836 296 aa9.27□□□□□ -0.93
IFT88-201ENST00000319980 BICC1Q9H694 974 aaKnown RBP9.27□□□□□ -0.93
IFT88-201ENST00000319980 NWD2Q9ULI1 1742 aa9.27□□□□□ -0.93
IFT88-201ENST00000319980 K7ELQ4 463 aaPredicted RBP9.27□□□□□ -0.93
IFT88-201ENST00000319980 KAZALD1Q96I82 304 aa9.27□□□□□ -0.93
IFT88-201ENST00000319980 CARD10Q9BWT7 1032 aa9.27□□□□□ -0.93
IFT88-201ENST00000319980 PLEKHG2Q9H7P9 1386 aa9.27□□□□□ -0.93
IFT88-201ENST00000319980 COL5A2P05997 1499 aaPredicted RBP9.26□□□□□ -0.93
IFT88-201ENST00000319980 ADAMTS7Q9UKP4 1686 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 NEURL1BA8MQ27 555 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
IFT88-201ENST00000319980 CHMLP26374 656 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 RABEP1Q15276 862 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 LRP10Q7Z4F1 713 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 METTL22Q9BUU2 404 aaPredicted RBP9.26□□□□□ -0.93
IFT88-201ENST00000319980 ABCC6O95255 1503 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 GCKRQ14397 625 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 CLASRPQ8N2M8 674 aaKnown RBP9.26□□□□□ -0.93
IFT88-201ENST00000319980 CNKSR2Q8WXI2 1034 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 ESYT1Q9BSJ8 1104 aa9.26□□□□□ -0.93
IFT88-201ENST00000319980 GSE1Q14687 1217 aa9.25□□□□□ -0.93
IFT88-201ENST00000319980 PI4K2BQ8TCG2 481 aa9.25□□□□□ -0.93
IFT88-201ENST00000319980 JARID2Q92833 1246 aaPredicted RBP9.25□□□□□ -0.93
IFT88-201ENST00000319980 UTYO14607 1347 aa9.25□□□□□ -0.93
IFT88-201ENST00000319980 ERVV-2B6SEH9 535 aa9.25□□□□□ -0.93
IFT88-201ENST00000319980 ANO2Q9NQ90 1003 aa9.25□□□□□ -0.93
IFT88-201ENST00000319980 AOX1Q06278 1338 aa9.25□□□□□ -0.93
IFT88-201ENST00000319980 SIPA1L3O60292 1781 aaPredicted RBP9.25□□□□□ -0.93
IFT88-201ENST00000319980 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
IFT88-201ENST00000319980 SIL1Q9H173 461 aa9.24□□□□□ -0.93
IFT88-201ENST00000319980 BTG4Q9NY30 223 aa9.24□□□□□ -0.93
IFT88-201ENST00000319980 G3BP1Q13283 466 aaKnown RBP eCLIP9.24□□□□□ -0.93
IFT88-201ENST00000319980 KLHDC4Q8TBB5 520 aa9.24□□□□□ -0.93
IFT88-201ENST00000319980 MRC1P22897 1456 aa9.24□□□□□ -0.93
IFT88-201ENST00000319980 SCN11AQ9UI33 1791 aa9.24□□□□□ -0.93
IFT88-201ENST00000319980 NBPF26B4DH59 902 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 IFIT2P09913 472 aaKnown RBP9.23□□□□□ -0.93
IFT88-201ENST00000319980 DDIT3P35638 169 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
IFT88-201ENST00000319980 EPHA10Q5JZY3 1008 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 NBPF14Q5TI25 921 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 NBPF10Q6P3W6 841 aaKnown RBP9.23□□□□□ -0.93
IFT88-201ENST00000319980 ERC1Q8IUD2 1116 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 NBPF15Q8N660 670 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 N4BP2Q86UW6 1770 aaPredicted RBP9.23□□□□□ -0.93
IFT88-201ENST00000319980 ST18O60284 1047 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 A1BGP04217 495 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 AACSQ86V21 672 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 CNTROBQ8N137 903 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 IL25Q9H293 177 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 A0A087WZG4 1122 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 GLRX3O76003 335 aaKnown RBP9.23□□□□□ -0.93
IFT88-201ENST00000319980 SASH1O94885 1247 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 MCM4P33991 863 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 PLBD2Q8NHP8 589 aa9.23□□□□□ -0.93
IFT88-201ENST00000319980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.23□□□□□ -0.93
IFT88-201ENST00000319980 ECHDC1Q9NTX5 307 aa9.22□□□□□ -0.93
IFT88-201ENST00000319980 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.22□□□□□ -0.93
IFT88-201ENST00000319980 MCCP23508 829 aa9.22□□□□□ -0.93
IFT88-201ENST00000319980 ZNF772Q68DY9 489 aaPredicted RBP9.22□□□□□ -0.93
IFT88-201ENST00000319980 TTLL7Q6ZT98 887 aa9.22□□□□□ -0.93
IFT88-201ENST00000319980 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
IFT88-201ENST00000319980 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
IFT88-201ENST00000319980 NEK4P51957 841 aa9.21□□□□□ -0.93
IFT88-201ENST00000319980 GPATCH3Q96I76 525 aa9.21□□□□□ -0.93
IFT88-201ENST00000319980 CCDC8Q9H0W5 538 aaPredicted RBP9.21□□□□□ -0.93
IFT88-201ENST00000319980 TMOD3Q9NYL9 352 aa9.21□□□□□ -0.93
IFT88-201ENST00000319980 PALD1Q9ULE6 856 aa9.21□□□□□ -0.93
IFT88-201ENST00000319980 CIZ1Q9ULV3 898 aaPredicted RBP9.21□□□□□ -0.93
IFT88-201ENST00000319980 C5P01031 1676 aa9.21□□□□□ -0.94
IFT88-201ENST00000319980 PKD1L3Q7Z443 1732 aa9.21□□□□□ -0.94
IFT88-201ENST00000319980 NRAPQ86VF7 1730 aa9.21□□□□□ -0.94
IFT88-201ENST00000319980 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
IFT88-201ENST00000319980 ZNF330Q9Y3S2 320 aaPredicted RBP9.21□□□□□ -0.94
IFT88-201ENST00000319980 TNPO1Q92973 898 aaKnown RBP9.2□□□□□ -0.94
IFT88-201ENST00000319980 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
IFT88-201ENST00000319980 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
IFT88-201ENST00000319980 ATRNO75882 1429 aa9.2□□□□□ -0.94
IFT88-201ENST00000319980 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
IFT88-201ENST00000319980 PLCH1Q4KWH8 1693 aa9.2□□□□□ -0.94
IFT88-201ENST00000319980 SGSM2O43147 1006 aa9.2□□□□□ -0.94
IFT88-201ENST00000319980 POTEAQ6S8J7 498 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms