RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 NBPF14Q5TI25 921 aa19.52■□□□□ 0.71
SHISA2-201ENST00000319420 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.71
SHISA2-201ENST00000319420 NBPF15Q8N660 670 aa19.52■□□□□ 0.71
SHISA2-201ENST00000319420 CCDC8Q9H0W5 538 aaPredicted RBP19.52■□□□□ 0.71
SHISA2-201ENST00000319420 ASAP1Q9ULH1 1129 aa19.52■□□□□ 0.71
SHISA2-201ENST00000319420 GCKRQ14397 625 aa19.51■□□□□ 0.71
SHISA2-201ENST00000319420 RTN4Q9NQC3 1192 aaKnown RBP19.51■□□□□ 0.71
SHISA2-201ENST00000319420 PXDNLA1KZ92 1463 aa19.5■□□□□ 0.71
SHISA2-201ENST00000319420 A0A087WZG4 1122 aa19.5■□□□□ 0.71
SHISA2-201ENST00000319420 ERC2O15083 957 aa19.5■□□□□ 0.71
SHISA2-201ENST00000319420 TMOD3Q9NYL9 352 aa19.5■□□□□ 0.71
SHISA2-201ENST00000319420 AACSQ86V21 672 aa19.5■□□□□ 0.71
SHISA2-201ENST00000319420 METTL22Q9BUU2 404 aaPredicted RBP19.5■□□□□ 0.71
SHISA2-201ENST00000319420 IL25Q9H293 177 aa19.5■□□□□ 0.71
SHISA2-201ENST00000319420 CLASRPQ8N2M8 674 aaKnown RBP19.5■□□□□ 0.71
SHISA2-201ENST00000319420 SALL3Q9BXA9 1300 aa19.49■□□□□ 0.71
SHISA2-201ENST00000319420 CACNA1FO60840 1977 aa19.49■□□□□ 0.71
SHISA2-201ENST00000319420 IL27Q8NEV9 243 aa19.49■□□□□ 0.71
SHISA2-201ENST00000319420 CCDC85AQ96PX6 553 aaPredicted RBP19.49■□□□□ 0.71
SHISA2-201ENST00000319420 OSBPL3Q9H4L5 887 aa19.49■□□□□ 0.71
SHISA2-201ENST00000319420 IFIT2P09913 472 aaKnown RBP19.49■□□□□ 0.71
SHISA2-201ENST00000319420 SNX21Q969T3 373 aa19.49■□□□□ 0.71
SHISA2-201ENST00000319420 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
SHISA2-201ENST00000319420 G3BP1Q13283 466 aaKnown RBP eCLIP19.48■□□□□ 0.71
SHISA2-201ENST00000319420 REC8O95072 547 aa19.48■□□□□ 0.71
SHISA2-201ENST00000319420 CHMLP26374 656 aa19.47■□□□□ 0.71
SHISA2-201ENST00000319420 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
SHISA2-201ENST00000319420 TLR7Q9NYK1 1049 aaKnown RBP19.47■□□□□ 0.71
SHISA2-201ENST00000319420 CWC27Q6UX04 472 aaKnown RBP19.46■□□□□ 0.71
SHISA2-201ENST00000319420 PIGBQ92521 554 aa19.46■□□□□ 0.71
SHISA2-201ENST00000319420 CHMP5Q9NZZ3 219 aa19.46■□□□□ 0.71
SHISA2-201ENST00000319420 ESYT1Q9BSJ8 1104 aa19.46■□□□□ 0.71
SHISA2-201ENST00000319420 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
SHISA2-201ENST00000319420 DNAJC10Q8IXB1 793 aa19.45■□□□□ 0.7
SHISA2-201ENST00000319420 PI4K2BQ8TCG2 481 aa19.45■□□□□ 0.7
SHISA2-201ENST00000319420 ERVV-2B6SEH9 535 aa19.45■□□□□ 0.7
SHISA2-201ENST00000319420 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
SHISA2-201ENST00000319420 SASH1O94885 1247 aa19.44■□□□□ 0.7
SHISA2-201ENST00000319420 HSP90AB4PQ58FF6 505 aa19.44■□□□□ 0.7
SHISA2-201ENST00000319420 PKNOX2Q96KN3 472 aa19.44■□□□□ 0.7
SHISA2-201ENST00000319420 SCN11AQ9UI33 1791 aa19.44■□□□□ 0.7
SHISA2-201ENST00000319420 K7ELQ4 463 aaPredicted RBP19.44■□□□□ 0.7
SHISA2-201ENST00000319420 DDIT3P35638 169 aa19.44■□□□□ 0.7
SHISA2-201ENST00000319420 EAF2Q96CJ1 260 aaPredicted RBP19.44■□□□□ 0.7
SHISA2-201ENST00000319420 ACSBG1Q96GR2 724 aa19.44■□□□□ 0.7
SHISA2-201ENST00000319420 C5P01031 1676 aa19.44■□□□□ 0.7
SHISA2-201ENST00000319420 UPF3BQ9BZI7 483 aaKnown RBP19.43■□□□□ 0.7
SHISA2-201ENST00000319420 STAP2Q9UGK3 403 aa19.43■□□□□ 0.7
SHISA2-201ENST00000319420 BOLA2Q9H3K6 86 aa19.43■□□□□ 0.7
SHISA2-201ENST00000319420 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
SHISA2-201ENST00000319420 GZF1Q9H116 711 aaPredicted RBP19.42■□□□□ 0.7
SHISA2-201ENST00000319420 NEK4P51957 841 aa19.42■□□□□ 0.7
SHISA2-201ENST00000319420 PLBD2Q8NHP8 589 aa19.42■□□□□ 0.7
SHISA2-201ENST00000319420 EDC3Q96F86 508 aaKnown RBP19.42■□□□□ 0.7
SHISA2-201ENST00000319420 MTX1Q13505 466 aa19.41■□□□□ 0.7
SHISA2-201ENST00000319420 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
SHISA2-201ENST00000319420 EXOC5O00471 708 aa19.41■□□□□ 0.7
SHISA2-201ENST00000319420 MCM4P33991 863 aa19.41■□□□□ 0.7
SHISA2-201ENST00000319420 SIPA1L3O60292 1781 aaPredicted RBP19.41■□□□□ 0.7
SHISA2-201ENST00000319420 GPTP24298 496 aa19.4■□□□□ 0.7
SHISA2-201ENST00000319420 RABEP1Q15276 862 aa19.4■□□□□ 0.7
SHISA2-201ENST00000319420 LARP6Q9BRS8 491 aaKnown RBP19.4■□□□□ 0.7
SHISA2-201ENST00000319420 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
SHISA2-201ENST00000319420 CNTROBQ8N137 903 aa19.4■□□□□ 0.7
SHISA2-201ENST00000319420 PRIM1P49642 420 aaKnown RBP19.39■□□□□ 0.7
SHISA2-201ENST00000319420 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.7
SHISA2-201ENST00000319420 ECHDC1Q9NTX5 307 aa19.39■□□□□ 0.7
SHISA2-201ENST00000319420 DTNBO60941 627 aa19.39■□□□□ 0.69
SHISA2-201ENST00000319420 FOXD4L5Q5VV16 416 aaPredicted RBP19.39■□□□□ 0.69
SHISA2-201ENST00000319420 FOXD4L4Q8WXT5 416 aaPredicted RBP19.39■□□□□ 0.69
SHISA2-201ENST00000319420 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
SHISA2-201ENST00000319420 TFCP2Q12800 502 aa19.38■□□□□ 0.69
SHISA2-201ENST00000319420 NKX1-1Q15270 411 aaPredicted RBP19.38■□□□□ 0.69
SHISA2-201ENST00000319420 DIAPH3Q9NSV4 1193 aa19.38■□□□□ 0.69
SHISA2-201ENST00000319420 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
SHISA2-201ENST00000319420 N4BP2Q86UW6 1770 aaPredicted RBP19.37■□□□□ 0.69
SHISA2-201ENST00000319420 FAM177BA6PVY3 158 aa19.37■□□□□ 0.69
SHISA2-201ENST00000319420 GLRX3O76003 335 aaKnown RBP19.37■□□□□ 0.69
SHISA2-201ENST00000319420 ERC1Q8IUD2 1116 aa19.37■□□□□ 0.69
SHISA2-201ENST00000319420 FAM89AQ96GI7 184 aa19.37■□□□□ 0.69
SHISA2-201ENST00000319420 GPATCH3Q96I76 525 aa19.37■□□□□ 0.69
SHISA2-201ENST00000319420 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
SHISA2-201ENST00000319420 ZGPATQ8N5A5 531 aaKnown RBP19.36■□□□□ 0.69
SHISA2-201ENST00000319420 NEUROD6Q96NK8 337 aa19.36■□□□□ 0.69
SHISA2-201ENST00000319420 ST18O60284 1047 aa19.36■□□□□ 0.69
SHISA2-201ENST00000319420 UTYO14607 1347 aa19.36■□□□□ 0.69
SHISA2-201ENST00000319420 CHGBP05060 677 aa19.35■□□□□ 0.69
SHISA2-201ENST00000319420 PTPN12Q05209 780 aaKnown RBP19.35■□□□□ 0.69
SHISA2-201ENST00000319420 TNPO1Q92973 898 aaKnown RBP19.35■□□□□ 0.69
SHISA2-201ENST00000319420 ADAMTS7Q9UKP4 1686 aa19.35■□□□□ 0.69
SHISA2-201ENST00000319420 MCCP23508 829 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 DNAJC2Q99543 621 aaKnown RBP19.34■□□□□ 0.69
SHISA2-201ENST00000319420 TBC1D2BQ9UPU7 963 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 CPA1P15085 419 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 KIAA1211Q6ZU35 1233 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 FAM227BQ96M60 508 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 MRC1P22897 1456 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 PKP1Q13835 747 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 SLC4A9Q96Q91 983 aa19.34■□□□□ 0.69
SHISA2-201ENST00000319420 BRPF3Q9ULD4 1205 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms