RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
KARS-202ENST00000319410 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
KARS-202ENST00000319410 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
KARS-202ENST00000319410 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
KARS-202ENST00000319410 TMPOP42166 694 aaKnown RBP12.33□□□□□ -0.43
KARS-202ENST00000319410 TEFQ10587 303 aa12.33□□□□□ -0.43
KARS-202ENST00000319410 CHD4Q14839 1912 aa12.33□□□□□ -0.43
KARS-202ENST00000319410 CICQ96RK0 1608 aaPredicted RBP12.33□□□□□ -0.43
KARS-202ENST00000319410 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
KARS-202ENST00000319410 ADRA2BP18089 450 aa12.33□□□□□ -0.44
KARS-202ENST00000319410 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.44
KARS-202ENST00000319410 MS4A1P11836 297 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 NLGN1Q8N2Q7 840 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 NGEFQ8N5V2 710 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 KCNQ3O43525 872 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 DCTN1Q14203 1278 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 MCM10Q7L590 875 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 TTC5Q8N0Z6 440 aa12.32□□□□□ -0.44
KARS-202ENST00000319410 ZNF496Q96IT1 587 aaPredicted RBP12.32□□□□□ -0.44
KARS-202ENST00000319410 PDE4AP27815 886 aa12.31□□□□□ -0.44
KARS-202ENST00000319410 RIPK4P57078 832 aa12.31□□□□□ -0.44
KARS-202ENST00000319410 USP42Q9H9J4 1324 aaKnown RBP12.31□□□□□ -0.44
KARS-202ENST00000319410 CLGNO14967 610 aa12.31□□□□□ -0.44
KARS-202ENST00000319410 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
KARS-202ENST00000319410 GTPBP4Q9BZE4 634 aaKnown RBP12.31□□□□□ -0.44
KARS-202ENST00000319410 A0A0G2JLW4 131 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 VGLL3A8MV65 326 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 CCDC146Q8IYE0 955 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 SOS1Q07889 1333 aaPredicted RBP12.3□□□□□ -0.44
KARS-202ENST00000319410 DDR1Q08345 913 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 CCDC27Q2M243 656 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
KARS-202ENST00000319410 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
KARS-202ENST00000319410 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
KARS-202ENST00000319410 SIPA1L3O60292 1781 aaPredicted RBP12.29□□□□□ -0.44
KARS-202ENST00000319410 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
KARS-202ENST00000319410 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
KARS-202ENST00000319410 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
KARS-202ENST00000319410 ESPNB1AK53 854 aa12.29□□□□□ -0.44
KARS-202ENST00000319410 FRAT2O75474 233 aaPredicted RBP12.29□□□□□ -0.44
KARS-202ENST00000319410 CNPY4Q8N129 248 aa12.29□□□□□ -0.44
KARS-202ENST00000319410 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
KARS-202ENST00000319410 PRAMEF22A3QJZ6 481 aa12.28□□□□□ -0.44
KARS-202ENST00000319410 APAF1O14727 1248 aa12.28□□□□□ -0.44
KARS-202ENST00000319410 ZPR1O75312 459 aa12.28□□□□□ -0.44
KARS-202ENST00000319410 PIP4K2AP48426 406 aaPredicted RBP12.28□□□□□ -0.44
KARS-202ENST00000319410 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
KARS-202ENST00000319410 TRIM44Q96DX7 344 aaPredicted RBP12.28□□□□□ -0.44
KARS-202ENST00000319410 COL15A1P39059 1388 aa12.28□□□□□ -0.44
KARS-202ENST00000319410 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
KARS-202ENST00000319410 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
KARS-202ENST00000319410 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.44
KARS-202ENST00000319410 DPEP1P16444 411 aa12.27□□□□□ -0.44
KARS-202ENST00000319410 DNTTIP2Q5QJE6 756 aaKnown RBP12.27□□□□□ -0.44
KARS-202ENST00000319410 FAM9BQ8IZU0 186 aa12.27□□□□□ -0.44
KARS-202ENST00000319410 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.44
KARS-202ENST00000319410 KIAA1551Q9HCM1 1747 aa12.27□□□□□ -0.45
KARS-202ENST00000319410 A1BGP04217 495 aa12.27□□□□□ -0.45
KARS-202ENST00000319410 MMP14P50281 582 aa12.27□□□□□ -0.45
KARS-202ENST00000319410 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
KARS-202ENST00000319410 STARD3NLO95772 234 aa12.26□□□□□ -0.45
KARS-202ENST00000319410 BICDL1Q6ZP65 573 aa12.26□□□□□ -0.45
KARS-202ENST00000319410 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
KARS-202ENST00000319410 BCL2L12Q9HB09 334 aa12.26□□□□□ -0.45
KARS-202ENST00000319410 KIF13BQ9NQT8 1826 aa12.26□□□□□ -0.45
KARS-202ENST00000319410 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
KARS-202ENST00000319410 PTMSP20962 102 aa12.26□□□□□ -0.45
KARS-202ENST00000319410 KIAA1211Q6ZU35 1233 aa12.26□□□□□ -0.45
KARS-202ENST00000319410 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.26□□□□□ -0.45
KARS-202ENST00000319410 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
KARS-202ENST00000319410 TM4SF1P30408 202 aa12.25□□□□□ -0.45
KARS-202ENST00000319410 NFIXQ14938 502 aa12.25□□□□□ -0.45
KARS-202ENST00000319410 ZNF526Q8TF50 670 aaPredicted RBP12.25□□□□□ -0.45
KARS-202ENST00000319410 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
KARS-202ENST00000319410 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
KARS-202ENST00000319410 CHRNA5P30532 468 aa12.25□□□□□ -0.45
KARS-202ENST00000319410 RRP7AQ9Y3A4 280 aaKnown RBP12.25□□□□□ -0.45
KARS-202ENST00000319410 USP16Q9Y5T5 823 aa12.25□□□□□ -0.45
KARS-202ENST00000319410 GOLGA6L3A6NEY3 463 aa12.24□□□□□ -0.45
KARS-202ENST00000319410 EIF5P55010 431 aaKnown RBP12.24□□□□□ -0.45
KARS-202ENST00000319410 TGFB2P61812 414 aa12.24□□□□□ -0.45
KARS-202ENST00000319410 TEX13AQ9BXU3 409 aaPredicted RBP12.24□□□□□ -0.45
KARS-202ENST00000319410 ZSCAN20P17040 1043 aaPredicted RBP12.23□□□□□ -0.45
KARS-202ENST00000319410 KCNA3P22001 575 aa12.23□□□□□ -0.45
KARS-202ENST00000319410 NEUROD2Q15784 382 aa12.23□□□□□ -0.45
KARS-202ENST00000319410 IL16Q14005 1332 aa12.23□□□□□ -0.45
KARS-202ENST00000319410 PTMAP06454 111 aaKnown RBP12.23□□□□□ -0.45
KARS-202ENST00000319410 XRCC6P12956 609 aaKnown RBP eCLIP12.23□□□□□ -0.45
KARS-202ENST00000319410 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
KARS-202ENST00000319410 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
KARS-202ENST00000319410 CHL1O00533 1208 aa12.22□□□□□ -0.45
KARS-202ENST00000319410 WDR63Q8IWG1 891 aa12.22□□□□□ -0.45
KARS-202ENST00000319410 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
KARS-202ENST00000319410 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms