RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 MYD88Q99836 296 aa22.38■■□□□ 1.17
SHISA3-201ENST00000319234 PHLPP1O60346 1717 aa22.37■■□□□ 1.17
SHISA3-201ENST00000319234 STAP2Q9UGK3 403 aa22.37■■□□□ 1.17
SHISA3-201ENST00000319234 K7ELQ4 463 aaPredicted RBP22.36■■□□□ 1.17
SHISA3-201ENST00000319234 TRAK2O60296 914 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 MX1P20591 662 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 PTMSP20962 102 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 RHPN1Q8TCX5 695 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 KIF1BPQ96EK5 621 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 RTN4Q9NQC3 1192 aaKnown RBP22.36■■□□□ 1.17
SHISA3-201ENST00000319234 TOGARAM1Q9Y4F4 1720 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 FSD2A1L4K1 749 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 NBPF26B4DH59 902 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 GCKRQ14397 625 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 NBPF14Q5TI25 921 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 NBPF10Q6P3W6 841 aaKnown RBP22.36■■□□□ 1.17
SHISA3-201ENST00000319234 NBPF15Q8N660 670 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 SUCLG2Q96I99 432 aa22.36■■□□□ 1.17
SHISA3-201ENST00000319234 TOM1O60784 492 aa22.35■■□□□ 1.17
SHISA3-201ENST00000319234 PTCD1O75127 700 aaKnown RBP22.35■■□□□ 1.17
SHISA3-201ENST00000319234 PLBD2Q8NHP8 589 aa22.35■■□□□ 1.17
SHISA3-201ENST00000319234 RAB3GAP1Q15042 981 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 CASC1Q6TDU7 716 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 KAZALD1Q96I82 304 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 GBP4Q96PP9 640 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 AOX1Q06278 1338 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 GOLGA6L3A6NEY3 463 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 FAM43AQ8N2R8 423 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 IL1RAPL2Q9NP60 686 aa22.34■■□□□ 1.17
SHISA3-201ENST00000319234 EXOC5O00471 708 aa22.33■■□□□ 1.17
SHISA3-201ENST00000319234 ISY1Q9ULR0 285 aaKnown RBP22.33■■□□□ 1.17
SHISA3-201ENST00000319234 RABEP1Q15276 862 aa22.32■■□□□ 1.16
SHISA3-201ENST00000319234 PIGBQ92521 554 aa22.32■■□□□ 1.16
SHISA3-201ENST00000319234 ADAMTS2O95450 1211 aa22.32■■□□□ 1.16
SHISA3-201ENST00000319234 A1BGP04217 495 aa22.32■■□□□ 1.16
SHISA3-201ENST00000319234 BICC1Q9H694 974 aaKnown RBP22.32■■□□□ 1.16
SHISA3-201ENST00000319234 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
SHISA3-201ENST00000319234 VSIG10Q8N0Z9 540 aa22.3■■□□□ 1.16
SHISA3-201ENST00000319234 TNPO1Q92973 898 aaKnown RBP22.3■■□□□ 1.16
SHISA3-201ENST00000319234 HSP90AA1P07900 732 aaKnown RBP22.3■■□□□ 1.16
SHISA3-201ENST00000319234 PIP4K2BP78356 416 aa22.3■■□□□ 1.16
SHISA3-201ENST00000319234 OS9Q13438 667 aaPredicted RBP22.3■■□□□ 1.16
SHISA3-201ENST00000319234 TSHZ3Q63HK5 1081 aa22.3■■□□□ 1.16
SHISA3-201ENST00000319234 TEX13AQ9BXU3 409 aaPredicted RBP22.3■■□□□ 1.16
SHISA3-201ENST00000319234 ERC1Q8IUD2 1116 aa22.29■■□□□ 1.16
SHISA3-201ENST00000319234 ATG3Q9NT62 314 aa22.29■■□□□ 1.16
SHISA3-201ENST00000319234 ASAP1Q9ULH1 1129 aa22.29■■□□□ 1.16
SHISA3-201ENST00000319234 THRAP3Q9Y2W1 955 aaKnown RBP22.29■■□□□ 1.16
SHISA3-201ENST00000319234 ARFGEF2Q9Y6D5 1785 aa22.29■■□□□ 1.16
SHISA3-201ENST00000319234 SKOR2Q2VWA4 1001 aaPredicted RBP22.29■■□□□ 1.16
SHISA3-201ENST00000319234 NUTM1Q86Y26 1132 aa22.29■■□□□ 1.16
SHISA3-201ENST00000319234 LRP6O75581 1613 aa22.28■■□□□ 1.16
SHISA3-201ENST00000319234 CD2BP2O95400 341 aaKnown RBP22.28■■□□□ 1.16
SHISA3-201ENST00000319234 SPATA31A1Q5TZJ5 1347 aa22.28■■□□□ 1.16
SHISA3-201ENST00000319234 COL15A1P39059 1388 aa22.27■■□□□ 1.16
SHISA3-201ENST00000319234 TTLL7Q6ZT98 887 aa22.27■■□□□ 1.16
SHISA3-201ENST00000319234 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
SHISA3-201ENST00000319234 PA2G4Q9UQ80 394 aaKnown RBP22.27■■□□□ 1.15
SHISA3-201ENST00000319234 WNK3Q9BYP7 1800 aa22.26■■□□□ 1.15
SHISA3-201ENST00000319234 NRAPQ86VF7 1730 aa22.26■■□□□ 1.15
SHISA3-201ENST00000319234 NUTM2BA6NNL0 878 aaPredicted RBP22.26■■□□□ 1.15
SHISA3-201ENST00000319234 NUTM2EB1AL46 878 aaPredicted RBP22.26■■□□□ 1.15
SHISA3-201ENST00000319234 ATP5J2-PTCD1G3V325 749 aa22.26■■□□□ 1.15
SHISA3-201ENST00000319234 CLEC17AQ6ZS10 378 aa22.26■■□□□ 1.15
SHISA3-201ENST00000319234 NUTM2AQ8IVF1 878 aaPredicted RBP22.26■■□□□ 1.15
SHISA3-201ENST00000319234 BCL9O00512 1426 aa22.26■■□□□ 1.15
SHISA3-201ENST00000319234 TUBGCP6Q96RT7 1819 aa22.25■■□□□ 1.15
SHISA3-201ENST00000319234 A0A087WZG4 1122 aa22.25■■□□□ 1.15
SHISA3-201ENST00000319234 G3BP1Q13283 466 aaKnown RBP eCLIP22.25■■□□□ 1.15
SHISA3-201ENST00000319234 EPHA10Q5JZY3 1008 aa22.25■■□□□ 1.15
SHISA3-201ENST00000319234 CLASRPQ8N2M8 674 aaKnown RBP22.25■■□□□ 1.15
SHISA3-201ENST00000319234 USP42Q9H9J4 1324 aaKnown RBP22.25■■□□□ 1.15
SHISA3-201ENST00000319234 ITGB4P16144 1822 aa22.24■■□□□ 1.15
SHISA3-201ENST00000319234 TRIM6-TRIM34B2RNG4 842 aa22.24■■□□□ 1.15
SHISA3-201ENST00000319234 ERC2O15083 957 aa22.24■■□□□ 1.15
SHISA3-201ENST00000319234 XRCC6P12956 609 aaKnown RBP eCLIP22.24■■□□□ 1.15
SHISA3-201ENST00000319234 MRE11P49959 708 aa22.24■■□□□ 1.15
SHISA3-201ENST00000319234 DNAJC10Q8IXB1 793 aa22.24■■□□□ 1.15
SHISA3-201ENST00000319234 RBM42Q9BTD8 480 aaKnown RBP22.24■■□□□ 1.15
SHISA3-201ENST00000319234 AFDNP55196 1824 aaKnown RBP22.24■■□□□ 1.15
SHISA3-201ENST00000319234 REC8O95072 547 aa22.23■■□□□ 1.15
SHISA3-201ENST00000319234 CASP7P55210 303 aa22.23■■□□□ 1.15
SHISA3-201ENST00000319234 UBE3BQ7Z3V4 1068 aa22.23■■□□□ 1.15
SHISA3-201ENST00000319234 PI4K2BQ8TCG2 481 aa22.23■■□□□ 1.15
SHISA3-201ENST00000319234 STARD3NLO95772 234 aa22.23■■□□□ 1.15
SHISA3-201ENST00000319234 RILPL2Q969X0 211 aa22.23■■□□□ 1.15
SHISA3-201ENST00000319234 GZF1Q9H116 711 aaPredicted RBP22.23■■□□□ 1.15
SHISA3-201ENST00000319234 TTC41PQ6P2S7 1318 aa22.22■■□□□ 1.15
SHISA3-201ENST00000319234 H7C1W4 665 aa22.22■■□□□ 1.15
SHISA3-201ENST00000319234 RABL6Q3YEC7 729 aaPredicted RBP22.22■■□□□ 1.15
SHISA3-201ENST00000319234 NUP188Q5SRE5 1749 aa22.22■■□□□ 1.15
SHISA3-201ENST00000319234 SPATA31A5Q5VU36 1347 aa22.21■■□□□ 1.15
SHISA3-201ENST00000319234 SPATA31A7Q8IWB4 1347 aa22.21■■□□□ 1.15
SHISA3-201ENST00000319234 DDB1Q16531 1140 aa22.21■■□□□ 1.15
SHISA3-201ENST00000319234 JARID2Q92833 1246 aaPredicted RBP22.21■■□□□ 1.15
SHISA3-201ENST00000319234 CWC25Q9NXE8 425 aaPredicted RBP22.21■■□□□ 1.15
SHISA3-201ENST00000319234 UBAP1LF5GYI3 381 aa22.21■■□□□ 1.15
SHISA3-201ENST00000319234 ZBTB3Q9H5J0 574 aa22.21■■□□□ 1.15
SHISA3-201ENST00000319234 SLIT2O94813 1529 aa22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms