RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
LDLRAD3-201ENST00000315571 POLR3GO15318 223 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 IL2RBP14784 551 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 V9GYY5 206 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 PIBF1Q8WXW3 757 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 C16orf45Q96MC5 204 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 SLIT2O94813 1529 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 DRC1Q96MC2 740 aa13.99□□□□□ -0.17
LDLRAD3-201ENST00000315571 ZNF445P59923 1031 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 PHF14O94880 888 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 CCDC27Q2M243 656 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 LRSAM1Q6UWE0 723 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 MYCBPQ99417 103 aaPredicted RBP13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 AFF2P51816 1311 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 RGPD2P0DJD1 1756 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 GPS2Q13227 327 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 TERF2Q15554 542 aa13.98□□□□□ -0.17
LDLRAD3-201ENST00000315571 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
LDLRAD3-201ENST00000315571 NOL8Q76FK4 1167 aaKnown RBP13.97□□□□□ -0.17
LDLRAD3-201ENST00000315571 KCNG1Q9UIX4 513 aa13.97□□□□□ -0.17
LDLRAD3-201ENST00000315571 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
LDLRAD3-201ENST00000315571 MEGF6O75095 1541 aa13.96□□□□□ -0.17
LDLRAD3-201ENST00000315571 GNAT3A8MTJ3 354 aa13.96□□□□□ -0.17
LDLRAD3-201ENST00000315571 ADCY5O95622 1261 aa13.96□□□□□ -0.17
LDLRAD3-201ENST00000315571 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
LDLRAD3-201ENST00000315571 SMC5Q8IY18 1101 aa13.96□□□□□ -0.17
LDLRAD3-201ENST00000315571 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-201ENST00000315571 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.18
LDLRAD3-201ENST00000315571 LNPKQ9C0E8 428 aa13.96□□□□□ -0.18
LDLRAD3-201ENST00000315571 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.18
LDLRAD3-201ENST00000315571 A0A0G2JS52 829 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 HNRNPH2P55795 449 aaKnown RBP13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 SPATA31A1Q5TZJ5 1347 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 WDR63Q8IWG1 891 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 MAP3K5Q99683 1374 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 SPATA31A5Q5VU36 1347 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 SPATA31A7Q8IWB4 1347 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 DCTN1Q14203 1278 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 VPS72Q15906 364 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 TPD52L1Q16890 204 aaPredicted RBP13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 ZCRB1Q8TBF4 217 aaKnown RBP13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 THUMPD2Q9BTF0 503 aaKnown RBP13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 ZNF521Q96K83 1311 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 MCM10Q7L590 875 aa13.95□□□□□ -0.18
LDLRAD3-201ENST00000315571 AKAP4Q5JQC9 854 aa13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 PDLIM2Q96JY6 352 aa13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 THRAP3Q9Y2W1 955 aaKnown RBP13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 BCL9LQ86UU0 1499 aa13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 CAPN2P17655 700 aa13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 ITPRIPQ8IWB1 547 aa13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 SLFN14P0C7P3 912 aa13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
LDLRAD3-201ENST00000315571 OVOS2A0A0G2JMS6 1433 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 MBD3O95983 291 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 CHRM1P11229 460 aaPredicted RBP13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 TDO2P48775 406 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 DDX54Q8TDD1 881 aaKnown RBP13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 FEZ2Q9UHY8 353 aaPredicted RBP13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
LDLRAD3-201ENST00000315571 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
LDLRAD3-201ENST00000315571 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
LDLRAD3-201ENST00000315571 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
LDLRAD3-201ENST00000315571 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
LDLRAD3-201ENST00000315571 EXOC5O00471 708 aa13.92□□□□□ -0.18
LDLRAD3-201ENST00000315571 FAM98CQ17RN3 349 aaKnown RBP13.92□□□□□ -0.18
LDLRAD3-201ENST00000315571 MPRIPQ6WCQ1 1025 aa13.92□□□□□ -0.18
LDLRAD3-201ENST00000315571 NRAPQ86VF7 1730 aa13.91□□□□□ -0.18
LDLRAD3-201ENST00000315571 SLFN5Q08AF3 891 aa13.91□□□□□ -0.18
LDLRAD3-201ENST00000315571 RAD51AP2Q09MP3 1159 aa13.91□□□□□ -0.18
LDLRAD3-201ENST00000315571 SKIDA1Q1XH10 827 aa13.91□□□□□ -0.18
LDLRAD3-201ENST00000315571 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
LDLRAD3-201ENST00000315571 PHKG2P15735 406 aa13.91□□□□□ -0.18
LDLRAD3-201ENST00000315571 GEMIN8Q9NWZ8 242 aaKnown RBP13.91□□□□□ -0.18
LDLRAD3-201ENST00000315571 IL16Q14005 1332 aa13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 SLC20A2Q08357 652 aa13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 TEFQ10587 303 aa13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 NAA30Q147X3 362 aaPredicted RBP13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 CTR9Q6PD62 1173 aa13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 HSP90B1P14625 803 aaKnown RBP13.9□□□□□ -0.18
LDLRAD3-201ENST00000315571 GNAI1P63096 354 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms