RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 WDR70Q9NW82 654 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 CAVIN4Q5BKX8 364 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 ZNF444Q8N0Y2 327 aaPredicted RBP24.21■■□□□ 1.47
KDM3B-201ENST00000314358 LMAN1P49257 510 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 C20orf194Q5TEA3 1177 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 TSHZ3Q63HK5 1081 aa24.21■■□□□ 1.47
KDM3B-201ENST00000314358 CCDC175P0C221 793 aa24.2■■□□□ 1.47
KDM3B-201ENST00000314358 GNAT3A8MTJ3 354 aa24.2■■□□□ 1.46
KDM3B-201ENST00000314358 PRC1O43663 620 aa24.2■■□□□ 1.46
KDM3B-201ENST00000314358 USO1O60763 962 aaKnown RBP24.2■■□□□ 1.46
KDM3B-201ENST00000314358 IDEP14735 1019 aa24.2■■□□□ 1.46
KDM3B-201ENST00000314358 HOMER2Q9NSB8 354 aa24.2■■□□□ 1.46
KDM3B-201ENST00000314358 GOLGA8AA7E2F4 631 aa24.19■■□□□ 1.46
KDM3B-201ENST00000314358 CTCFLQ8NI51 663 aaPredicted RBP24.19■■□□□ 1.46
KDM3B-201ENST00000314358 IFIT3O14879 490 aaKnown RBP24.19■■□□□ 1.46
KDM3B-201ENST00000314358 HAND2P61296 217 aa24.19■■□□□ 1.46
KDM3B-201ENST00000314358 SMARCC1Q92922 1105 aaPredicted RBP24.19■■□□□ 1.46
KDM3B-201ENST00000314358 YEATS4O95619 227 aa24.19■■□□□ 1.46
KDM3B-201ENST00000314358 KIF1BPQ96EK5 621 aa24.19■■□□□ 1.46
KDM3B-201ENST00000314358 EPRSP07814 1512 aaKnown RBP24.19■■□□□ 1.46
KDM3B-201ENST00000314358 ZNF213O14771 459 aa24.18■■□□□ 1.46
KDM3B-201ENST00000314358 ZNF830Q96NB3 372 aaPredicted RBP24.18■■□□□ 1.46
KDM3B-201ENST00000314358 JADE2Q9NQC1 790 aa24.18■■□□□ 1.46
KDM3B-201ENST00000314358 PAIP2Q9BPZ3 127 aaKnown RBP24.18■■□□□ 1.46
KDM3B-201ENST00000314358 CCDC40Q4G0X9 1142 aa24.18■■□□□ 1.46
KDM3B-201ENST00000314358 CCDC150Q8NCX0 1101 aa24.18■■□□□ 1.46
KDM3B-201ENST00000314358 CIZ1Q9ULV3 898 aaPredicted RBP24.18■■□□□ 1.46
KDM3B-201ENST00000314358 JARID2Q92833 1246 aaPredicted RBP24.17■■□□□ 1.46
KDM3B-201ENST00000314358 ANKRD30BQ9BXX2 1392 aa24.17■■□□□ 1.46
KDM3B-201ENST00000314358 WAPLQ7Z5K2 1190 aa24.17■■□□□ 1.46
KDM3B-201ENST00000314358 RGS22Q8NE09 1264 aa24.17■■□□□ 1.46
KDM3B-201ENST00000314358 TMEM87AQ8NBN3 555 aa24.17■■□□□ 1.46
KDM3B-201ENST00000314358 CCDC194A0A1B0GVG4 234 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 ADCY5O95622 1261 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 CUL5Q93034 780 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 TMEM266Q2M3C6 531 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 IQGAP2Q13576 1575 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 GJB2P29033 226 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 GPTP24298 496 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 TMPOP42166 694 aaKnown RBP24.16■■□□□ 1.46
KDM3B-201ENST00000314358 SAMM50Q9Y512 469 aa24.16■■□□□ 1.46
KDM3B-201ENST00000314358 CA8P35219 290 aa24.15■■□□□ 1.46
KDM3B-201ENST00000314358 APBB1IPQ7Z5R6 666 aaPredicted RBP24.15■■□□□ 1.46
KDM3B-201ENST00000314358 TNPO1Q92973 898 aaKnown RBP24.15■■□□□ 1.46
KDM3B-201ENST00000314358 MPRIPQ6WCQ1 1025 aa24.15■■□□□ 1.46
KDM3B-201ENST00000314358 PLCD3Q8N3E9 789 aa24.15■■□□□ 1.46
KDM3B-201ENST00000314358 STARD3NLO95772 234 aa24.15■■□□□ 1.46
KDM3B-201ENST00000314358 SNRKQ9NRH2 765 aa24.15■■□□□ 1.46
KDM3B-201ENST00000314358 ZPR1O75312 459 aa24.15■■□□□ 1.46
KDM3B-201ENST00000314358 TAF7Q15545 349 aaPredicted RBP24.15■■□□□ 1.46
KDM3B-201ENST00000314358 RPAP2Q8IXW5 612 aaPredicted RBP24.14■■□□□ 1.46
KDM3B-201ENST00000314358 ARHGEF11O15085 1522 aa24.14■■□□□ 1.46
KDM3B-201ENST00000314358 ATAD2Q6PL18 1390 aa24.14■■□□□ 1.45
KDM3B-201ENST00000314358 GLRX3O76003 335 aaKnown RBP24.14■■□□□ 1.45
KDM3B-201ENST00000314358 ECM2O94769 699 aaPredicted RBP24.14■■□□□ 1.45
KDM3B-201ENST00000314358 SYCP3Q8IZU3 236 aa24.14■■□□□ 1.45
KDM3B-201ENST00000314358 ABCA10Q8WWZ4 1543 aa24.14■■□□□ 1.45
KDM3B-201ENST00000314358 AKAP2Q9Y2D5 859 aa24.13■■□□□ 1.45
KDM3B-201ENST00000314358 ARL1P40616 181 aaPredicted RBP24.13■■□□□ 1.45
KDM3B-201ENST00000314358 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
KDM3B-201ENST00000314358 SCAND2PQ9GZW5 306 aaPredicted RBP24.12■■□□□ 1.45
KDM3B-201ENST00000314358 SNW1Q13573 536 aaKnown RBP24.12■■□□□ 1.45
KDM3B-201ENST00000314358 IQCA1Q86XH1 822 aa24.12■■□□□ 1.45
KDM3B-201ENST00000314358 ALS2CR12Q96Q35 445 aa24.12■■□□□ 1.45
KDM3B-201ENST00000314358 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
KDM3B-201ENST00000314358 ZNF287Q9HBT7 754 aa24.12■■□□□ 1.45
KDM3B-201ENST00000314358 MICALCLQ6ZW33 695 aa24.11■■□□□ 1.45
KDM3B-201ENST00000314358 CCDC12Q8WUD4 166 aaPredicted RBP24.11■■□□□ 1.45
KDM3B-201ENST00000314358 KIF2AO00139 706 aaPredicted RBP24.11■■□□□ 1.45
KDM3B-201ENST00000314358 ZNF354CQ86Y25 554 aa24.11■■□□□ 1.45
KDM3B-201ENST00000314358 PPP1R14CQ8TAE6 165 aa24.11■■□□□ 1.45
KDM3B-201ENST00000314358 CCDC141Q6ZP82 1450 aa24.11■■□□□ 1.45
KDM3B-201ENST00000314358 FSD2A1L4K1 749 aa24.11■■□□□ 1.45
KDM3B-201ENST00000314358 MICU3Q86XE3 530 aa24.11■■□□□ 1.45
KDM3B-201ENST00000314358 MCM3P25205 808 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 MAP3K12Q12852 859 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 PPM1EQ8WY54 764 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 TMOD3Q9NYL9 352 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 LAMC3Q9Y6N6 1575 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 GRIPAP1Q4V328 841 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 TRMT112Q9UI30 125 aaKnown RBP24.1■■□□□ 1.45
KDM3B-201ENST00000314358 GOLIM4O00461 696 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 FGFR1OPO95684 399 aaKnown RBP24.1■■□□□ 1.45
KDM3B-201ENST00000314358 CD109Q6YHK3 1445 aa24.1■■□□□ 1.45
KDM3B-201ENST00000314358 IFIT5Q13325 482 aaKnown RBP24.1■■□□□ 1.45
KDM3B-201ENST00000314358 NUDT16Q96DE0 195 aaKnown RBP24.1■■□□□ 1.45
KDM3B-201ENST00000314358 GJC1P36383 396 aa24.09■■□□□ 1.45
KDM3B-201ENST00000314358 CATIPQ7Z7H3 387 aa24.09■■□□□ 1.45
KDM3B-201ENST00000314358 DDX23Q9BUQ8 820 aaKnown RBP24.09■■□□□ 1.45
KDM3B-201ENST00000314358 A0A1W2PRG0 241 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 TAOK3Q9H2K8 898 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 RAB34Q9BZG1 259 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 CCDC196A0A1B0GTZ2 297 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 GNG11P61952 73 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 SLFN5Q08AF3 891 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 CEP135Q66GS9 1140 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 SLC26A6Q9BXS9 759 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 GIMAP6Q6P9H5 292 aa24.08■■□□□ 1.45
KDM3B-201ENST00000314358 SSH1Q8WYL5 1049 aa24.08■■□□□ 1.44
KDM3B-201ENST00000314358 BICD1Q96G01 975 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms