RNA–Protein interactions for RNA: ENST00000313005.10

BACE1-201, Transcript of beta-secretase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BACE1, Length 6,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-201ENST00000313005 TMEM67Q5HYA8 995 aa19.45■□□□□ 0.7
BACE1-201ENST00000313005 SKAP1Q86WV1 359 aa19.45■□□□□ 0.7
BACE1-201ENST00000313005 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.45■□□□□ 0.7
BACE1-201ENST00000313005 PODXL2Q9NZ53 605 aa19.45■□□□□ 0.7
BACE1-201ENST00000313005 FGFR1OPO95684 399 aaKnown RBP19.45■□□□□ 0.7
BACE1-201ENST00000313005 NOP2P46087 812 aaKnown RBP19.45■□□□□ 0.7
BACE1-201ENST00000313005 TICAM2Q86XR7 235 aa19.44■□□□□ 0.7
BACE1-201ENST00000313005 RGS22Q8NE09 1264 aa19.44■□□□□ 0.7
BACE1-201ENST00000313005 ANO10Q9NW15 660 aa19.44■□□□□ 0.7
BACE1-201ENST00000313005 KIF20AO95235 890 aa19.44■□□□□ 0.7
BACE1-201ENST00000313005 PHAXQ9H814 394 aaKnown RBP19.44■□□□□ 0.7
BACE1-201ENST00000313005 RNF187Q5TA31 235 aaPredicted RBP19.44■□□□□ 0.7
BACE1-201ENST00000313005 SMC1AQ14683 1233 aaKnown RBP19.44■□□□□ 0.7
BACE1-201ENST00000313005 PTPN14Q15678 1187 aa19.44■□□□□ 0.7
BACE1-201ENST00000313005 CLIP2Q9UDT6 1046 aa19.44■□□□□ 0.7
BACE1-201ENST00000313005 ATAD2Q6PL18 1390 aa19.44■□□□□ 0.7
BACE1-201ENST00000313005 MAP3K9P80192 1104 aa19.43■□□□□ 0.7
BACE1-201ENST00000313005 MYO1BO43795 1136 aa19.43■□□□□ 0.7
BACE1-201ENST00000313005 PICALMQ13492 652 aa19.43■□□□□ 0.7
BACE1-201ENST00000313005 HLTFQ14527 1009 aaKnown RBP eCLIP19.43■□□□□ 0.7
BACE1-201ENST00000313005 DPH6Q7L8W6 267 aa19.43■□□□□ 0.7
BACE1-201ENST00000313005 ST5P78524 1137 aa19.43■□□□□ 0.7
BACE1-201ENST00000313005 TSHZ3Q63HK5 1081 aa19.43■□□□□ 0.7
BACE1-201ENST00000313005 SHTN1A0MZ66 631 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 GCOM1H8Y6P7 765 aaPredicted RBP19.42■□□□□ 0.7
BACE1-201ENST00000313005 MYZAPP0CAP1 466 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 ARL1P40616 181 aaPredicted RBP19.42■□□□□ 0.7
BACE1-201ENST00000313005 FSIP1Q8NA03 581 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 RNF41Q9H4P4 317 aaPredicted RBP19.42■□□□□ 0.7
BACE1-201ENST00000313005 PLS1Q14651 629 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 MICU3Q86XE3 530 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 SLC26A6Q9BXS9 759 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 IQSEC3Q9UPP2 1182 aaPredicted RBP19.42■□□□□ 0.7
BACE1-201ENST00000313005 EMILIN1Q9Y6C2 1016 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 ZSCAN12O43309 604 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 HLA-DOAP06340 250 aa19.42■□□□□ 0.7
BACE1-201ENST00000313005 USO1O60763 962 aaKnown RBP19.41■□□□□ 0.7
BACE1-201ENST00000313005 BACH2Q9BYV9 841 aa19.41■□□□□ 0.7
BACE1-201ENST00000313005 TFIP11Q9UBB9 837 aaKnown RBP19.41■□□□□ 0.7
BACE1-201ENST00000313005 CCDC61Q9Y6R9 512 aa19.41■□□□□ 0.7
BACE1-201ENST00000313005 NAIPQ13075 1403 aa19.41■□□□□ 0.7
BACE1-201ENST00000313005 YEATS4O95619 227 aa19.41■□□□□ 0.7
BACE1-201ENST00000313005 SYNCQ9H7C4 482 aa19.41■□□□□ 0.7
BACE1-201ENST00000313005 POLR3GO15318 223 aaPredicted RBP19.41■□□□□ 0.7
BACE1-201ENST00000313005 CEBPAP49715 358 aaPredicted RBP19.41■□□□□ 0.7
BACE1-201ENST00000313005 CHRNA2Q15822 529 aa19.41■□□□□ 0.7
BACE1-201ENST00000313005 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
BACE1-201ENST00000313005 RBM26Q5T8P6 1007 aaKnown RBP19.4■□□□□ 0.7
BACE1-201ENST00000313005 GDPD2Q9HCC8 539 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 KIAA1107Q9UPP5 1409 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 SPECC1Q5M775 1068 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 GIMAP7Q8NHV1 300 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 MCM4P33991 863 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 CETN1Q12798 172 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 TCP11L1Q9NUJ3 509 aa19.4■□□□□ 0.7
BACE1-201ENST00000313005 CCDC184Q52MB2 194 aa19.39■□□□□ 0.7
BACE1-201ENST00000313005 TMC6Q7Z403 805 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 CCDC183Q5T5S1 534 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 PRDM10Q9NQV6 1147 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 CASKIN1Q8WXD9 1431 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 PDE4BQ07343 736 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 USP16Q9Y5T5 823 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 GJB2P29033 226 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 MFSD6Q6ZSS7 791 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 SSX2IPQ9Y2D8 614 aa19.39■□□□□ 0.69
BACE1-201ENST00000313005 BAG3O95817 575 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 PAFAH1B1P43034 410 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 PDCL2Q8N4E4 241 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 HYPKQ9NX55 129 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 NBPF6Q5VWK0 638 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 NBPF5PQ86XG9 351 aaPredicted RBP19.38■□□□□ 0.69
BACE1-201ENST00000313005 NBPF4Q96M43 638 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 CDC5LQ99459 802 aaKnown RBP19.38■□□□□ 0.69
BACE1-201ENST00000313005 PHF8Q9UPP1 1060 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 OTUD6BQ8N6M0 293 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 HFM1A2PYH4 1435 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 FAM212AQ96EL1 285 aa19.38■□□□□ 0.69
BACE1-201ENST00000313005 CWC25Q9NXE8 425 aaPredicted RBP19.38■□□□□ 0.69
BACE1-201ENST00000313005 HMGB1P09429 215 aaKnown RBP19.37■□□□□ 0.69
BACE1-201ENST00000313005 GJC1P36383 396 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 CBX1P83916 185 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 TSNARE1Q96NA8 513 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 TSPY3P0CV98 308 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 TSPY8P0CW00 308 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 METAP2P50579 478 aaKnown RBP eCLIP19.37■□□□□ 0.69
BACE1-201ENST00000313005 MAP9Q49MG5 647 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 MAATS1Q7Z4T9 603 aa19.37■□□□□ 0.69
BACE1-201ENST00000313005 HMGB2P26583 209 aaKnown RBP19.36■□□□□ 0.69
BACE1-201ENST00000313005 AMPD3Q01432 767 aa19.36■□□□□ 0.69
BACE1-201ENST00000313005 CCDC174Q6PII3 467 aa19.36■□□□□ 0.69
BACE1-201ENST00000313005 STX8Q9UNK0 236 aa19.36■□□□□ 0.69
BACE1-201ENST00000313005 KIF5BP33176 963 aa19.36■□□□□ 0.69
BACE1-201ENST00000313005 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
BACE1-201ENST00000313005 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
BACE1-201ENST00000313005 AKNAD1Q5T1N1 836 aa19.36■□□□□ 0.69
BACE1-201ENST00000313005 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms