RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 GABPB2Q8TAK5 448 aaPredicted RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 EVI5LQ96CN4 794 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 SLC5A4Q9NY91 659 aa3.71□□□□□ -1.82
CLOCK-201ENST00000309964 CWC15Q9P013 229 aaKnown RBP3.71□□□□□ -1.82
CLOCK-201ENST00000309964 IFI16Q16666 785 aaKnown RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ZNF804AQ7Z570 1209 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ARHGAP45Q92619 1136 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 NECTIN2Q92692 538 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 PCDH11XQ9BZA7 1347 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 PCDH11YQ9BZA8 1340 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 SPDYE4A6NLX3 237 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 PDE4AP27815 886 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 TMPOP42166 694 aaKnown RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 SNX16P57768 344 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ZC3H6P61129 1189 aaKnown RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 TMED8Q6PL24 325 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 MNS1Q8NEH6 495 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 NAP1L4Q99733 375 aaKnown RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 LNPKQ9C0E8 428 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 FLT4P35916 1363 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 TRAPPC8Q9Y2L5 1435 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 LDHAL6AQ6ZMR3 332 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC83Q8IWF9 413 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ERMNQ8TAM6 284 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 MAST1Q9Y2H9 1570 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 RIMS2Q9UQ26 1411 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 CALM1P0DP23 149 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 CALM2P0DP24 149 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 CALM3P0DP25 149 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 TNFAIP1Q13829 316 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 CALML4Q96GE6 196 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 KRT23Q9C075 422 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 DPY19L2Q6NUT2 758 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 EIF3DO15371 548 aaKnown RBP eCLIP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 CALML3P27482 149 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 HOXA7P31268 230 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 MSANTD4Q8NCY6 345 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 GOLGA6L9A6NEM1 432 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 EIF3JO75822 258 aaKnown RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 IDH1O75874 414 aaKnown RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 PRPHP41219 470 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 NEK4P51957 841 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 FKBP15Q5T1M5 1219 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 FAM114A1Q8IWE2 563 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 RBM19Q9Y4C8 960 aaKnown RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ATP7AQ04656 1500 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 SYCP2Q9BX26 1530 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 HOXB7P09629 217 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 NUTM2GQ5VZR2 741 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 DCAF5Q96JK2 942 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 GBP3Q9H0R5 595 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ZSCAN16Q9H4T2 348 aaPredicted RBP3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ATP10BO94823 1461 aa3.7□□□□□ -1.82
CLOCK-201ENST00000309964 ERLIN1O75477 346 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 IL2RBP14784 551 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 AKAP4Q5JQC9 854 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 NBPF6Q5VWK0 638 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 AACSQ86V21 672 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 NBPF5PQ86XG9 351 aaPredicted RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 NBPF4Q96M43 638 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 GOLIM4O00461 696 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 FANCIQ9NVI1 1328 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CHD1O14646 1710 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 STX6O43752 255 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ME1P48163 572 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 LARP1BQ659C4 914 aaKnown RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 SREK1Q8WXA9 508 aaKnown RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 PABPN1LA6NDY0 278 aaKnown RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 C6orf229H3BNL8 230 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 MATR3P43243 847 aaKnown RBP eCLIP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC181Q5TID7 509 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ZNF772Q68DY9 489 aaPredicted RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC174Q6PII3 467 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CCAR2Q8N163 923 aaKnown RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 SPRYD3Q8NCJ5 442 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 BAG6P46379 1132 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ANAPC15P60006 121 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 SAMD1Q6SPF0 538 aaPredicted RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CDC37L1Q7L3B6 337 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC91Q7Z6B0 441 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ZMYM3Q14202 1370 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ADAMTS2O95450 1211 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 VIMP08670 466 aaKnown RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 MAP3K9P80192 1104 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 PABPC4Q13310 644 aaKnown RBP eCLIP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 GSE1Q14687 1217 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 TBC1D22AQ8WUA7 517 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 SCLT1Q96NL6 688 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ADAMTS8Q9UP79 889 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 SLC12A7Q9Y666 1083 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 EPB41L2O43491 1005 aaKnown RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 NEFHP12036 1026 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 CHD1LQ86WJ1 897 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 HACE1Q8IYU2 909 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 DNAAF4Q8WXU2 420 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ESR2Q92731 530 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 SPC25Q9HBM1 224 aa3.69□□□□□ -1.82
CLOCK-201ENST00000309964 ORC3Q9UBD5 711 aaPredicted RBP3.69□□□□□ -1.82
CLOCK-201ENST00000309964 PARP3Q9Y6F1 533 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms