RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
CASP3-201ENST00000308394 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
CASP3-201ENST00000308394 A1BGP04217 495 aa13.42□□□□□ -0.26
CASP3-201ENST00000308394 XAGE3Q8WTP9 111 aa13.42□□□□□ -0.26
CASP3-201ENST00000308394 PAPPAQ13219 1627 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 KCNQ2O43526 872 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
CASP3-201ENST00000308394 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 KSR2Q6VAB6 950 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 RIC3Q7Z5B4 369 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 SRCIN1Q9C0H9 1055 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 ATRNO75882 1429 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 DOT1LQ8TEK3 1739 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 DNAJC10Q8IXB1 793 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 ZNF526Q8TF50 670 aaPredicted RBP13.41□□□□□ -0.26
CASP3-201ENST00000308394 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
CASP3-201ENST00000308394 PRDM16Q9HAZ2 1276 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 UBR2Q8IWV8 1755 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 ADCY9O60503 1353 aa13.41□□□□□ -0.26
CASP3-201ENST00000308394 SKAP1Q86WV1 359 aa13.4□□□□□ -0.26
CASP3-201ENST00000308394 GLI3P10071 1580 aa13.4□□□□□ -0.26
CASP3-201ENST00000308394 SEPT12Q8IYM1 358 aa13.4□□□□□ -0.26
CASP3-201ENST00000308394 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
CASP3-201ENST00000308394 STARD3NLO95772 234 aa13.39□□□□□ -0.27
CASP3-201ENST00000308394 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
CASP3-201ENST00000308394 NBPF14Q5TI25 921 aa13.39□□□□□ -0.27
CASP3-201ENST00000308394 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
CASP3-201ENST00000308394 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
CASP3-201ENST00000308394 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
CASP3-201ENST00000308394 ZNF330Q9Y3S2 320 aaPredicted RBP13.39□□□□□ -0.27
CASP3-201ENST00000308394 BEND3Q5T5X7 828 aa13.39□□□□□ -0.27
CASP3-201ENST00000308394 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
CASP3-201ENST00000308394 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
CASP3-201ENST00000308394 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
CASP3-201ENST00000308394 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
CASP3-201ENST00000308394 SLC4A9Q96Q91 983 aa13.38□□□□□ -0.27
CASP3-201ENST00000308394 PLCD4Q9BRC7 762 aa13.38□□□□□ -0.27
CASP3-201ENST00000308394 PXDNLA1KZ92 1463 aa13.38□□□□□ -0.27
CASP3-201ENST00000308394 GNAI3P08754 354 aa13.38□□□□□ -0.27
CASP3-201ENST00000308394 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
CASP3-201ENST00000308394 GNAI2P04899 355 aa13.37□□□□□ -0.27
CASP3-201ENST00000308394 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
CASP3-201ENST00000308394 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
CASP3-201ENST00000308394 USP44Q9H0E7 712 aa13.37□□□□□ -0.27
CASP3-201ENST00000308394 THSD7AQ9UPZ6 1657 aa13.37□□□□□ -0.27
CASP3-201ENST00000308394 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
CASP3-201ENST00000308394 CWF19L2Q2TBE0 894 aaKnown RBP13.36□□□□□ -0.27
CASP3-201ENST00000308394 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
CASP3-201ENST00000308394 SIRT2Q8IXJ6 389 aa13.36□□□□□ -0.27
CASP3-201ENST00000308394 SMARCC1Q92922 1105 aaPredicted RBP13.36□□□□□ -0.27
CASP3-201ENST00000308394 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
CASP3-201ENST00000308394 RGS3P49796 1198 aa13.36□□□□□ -0.27
CASP3-201ENST00000308394 SIK1P57059 783 aa13.36□□□□□ -0.27
CASP3-201ENST00000308394 RPAP2Q8IXW5 612 aaPredicted RBP13.36□□□□□ -0.27
CASP3-201ENST00000308394 MYD88Q99836 296 aa13.36□□□□□ -0.27
CASP3-201ENST00000308394 C9orf78Q9NZ63 289 aaPredicted RBP13.36□□□□□ -0.27
CASP3-201ENST00000308394 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 ZBTB22O15209 634 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 CYP19A1P11511 503 aaPredicted RBP13.35□□□□□ -0.27
CASP3-201ENST00000308394 CEP85Q6P2H3 762 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 TTLL7Q6ZT98 887 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 PTF1AQ7RTS3 328 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 LINS1Q8NG48 757 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 ANKRD44Q8N8A2 993 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 PLBD2Q8NHP8 589 aa13.35□□□□□ -0.27
CASP3-201ENST00000308394 METTL22Q9BUU2 404 aaPredicted RBP13.35□□□□□ -0.27
CASP3-201ENST00000308394 NBPF7P0C2Y1 421 aaPredicted RBP13.34□□□□□ -0.27
CASP3-201ENST00000308394 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
CASP3-201ENST00000308394 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
CASP3-201ENST00000308394 ZBTB3Q9H5J0 574 aa13.34□□□□□ -0.27
CASP3-201ENST00000308394 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
CASP3-201ENST00000308394 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
CASP3-201ENST00000308394 SMC5Q8IY18 1101 aa13.33□□□□□ -0.28
CASP3-201ENST00000308394 ZBTB1Q9Y2K1 713 aa13.33□□□□□ -0.28
CASP3-201ENST00000308394 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
CASP3-201ENST00000308394 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
CASP3-201ENST00000308394 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
CASP3-201ENST00000308394 NEURL1BA8MQ27 555 aa13.32□□□□□ -0.28
CASP3-201ENST00000308394 HMMRO75330 724 aa13.32□□□□□ -0.28
CASP3-201ENST00000308394 KIF6Q6ZMV9 814 aa13.32□□□□□ -0.28
CASP3-201ENST00000308394 KRT27Q7Z3Y8 459 aa13.32□□□□□ -0.28
CASP3-201ENST00000308394 ITPK1Q13572 414 aa13.31□□□□□ -0.28
CASP3-201ENST00000308394 GRIPAP1Q4V328 841 aa13.31□□□□□ -0.28
CASP3-201ENST00000308394 GRM8O00222 908 aa13.31□□□□□ -0.28
CASP3-201ENST00000308394 KCNQ4P56696 695 aa13.31□□□□□ -0.28
CASP3-201ENST00000308394 ANKRD45Q5TZF3 282 aa13.31□□□□□ -0.28
CASP3-201ENST00000308394 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
CASP3-201ENST00000308394 GCKRQ14397 625 aa13.3□□□□□ -0.28
CASP3-201ENST00000308394 ATP8B2P98198 1209 aa13.3□□□□□ -0.28
CASP3-201ENST00000308394 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
CASP3-201ENST00000308394 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
CASP3-201ENST00000308394 PNMA6EA0A0J9YXQ4 647 aa13.29□□□□□ -0.28
CASP3-201ENST00000308394 DCTPP1Q9H773 170 aa13.29□□□□□ -0.28
CASP3-201ENST00000308394 HDAC5Q9UQL6 1122 aa13.29□□□□□ -0.28
CASP3-201ENST00000308394 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
CASP3-201ENST00000308394 INTS5Q6P9B9 1019 aaKnown RBP13.29□□□□□ -0.28
CASP3-201ENST00000308394 FAM196AQ6ZSG2 479 aa13.29□□□□□ -0.28
CASP3-201ENST00000308394 LNPKQ9C0E8 428 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms