RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ZNF622Q969S3 477 aaKnown RBP eCLIP22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 NIP7Q9Y221 180 aaKnown RBP eCLIP22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 PDE6BP35913 854 aa22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 BRIP1Q9BX63 1249 aa22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 TRIM35Q9UPQ4 493 aa22.31■■□□□ 1.16
HMGCLL1-202ENST00000308161 HLFQ16534 295 aa22.3■■□□□ 1.16
HMGCLL1-202ENST00000308161 KIF6Q6ZMV9 814 aa22.3■■□□□ 1.16
HMGCLL1-202ENST00000308161 TTLL6Q8N841 843 aa22.3■■□□□ 1.16
HMGCLL1-202ENST00000308161 ANKRD31Q8N7Z5 1873 aa22.29■■□□□ 1.16
HMGCLL1-202ENST00000308161 TTLL7Q6ZT98 887 aa22.29■■□□□ 1.16
HMGCLL1-202ENST00000308161 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
HMGCLL1-202ENST00000308161 C9orf131Q5VYM1 1079 aa22.28■■□□□ 1.16
HMGCLL1-202ENST00000308161 BABAM1Q9NWV8 329 aa22.28■■□□□ 1.16
HMGCLL1-202ENST00000308161 ZNF219Q9P2Y4 722 aaPredicted RBP22.28■■□□□ 1.16
HMGCLL1-202ENST00000308161 C1QTNF8P60827 252 aa22.27■■□□□ 1.16
HMGCLL1-202ENST00000308161 ZBTB3Q9H5J0 574 aa22.27■■□□□ 1.16
HMGCLL1-202ENST00000308161 DLEC1Q9Y238 1755 aa22.26■■□□□ 1.15
HMGCLL1-202ENST00000308161 APAF1O14727 1248 aa22.26■■□□□ 1.15
HMGCLL1-202ENST00000308161 RASSF7Q02833 373 aa22.26■■□□□ 1.15
HMGCLL1-202ENST00000308161 KRT24Q2M2I5 525 aa22.26■■□□□ 1.15
HMGCLL1-202ENST00000308161 CCDC184Q52MB2 194 aa22.26■■□□□ 1.15
HMGCLL1-202ENST00000308161 RNF181Q9P0P0 153 aa22.26■■□□□ 1.15
HMGCLL1-202ENST00000308161 MAP3K15Q6ZN16 1313 aa22.25■■□□□ 1.15
HMGCLL1-202ENST00000308161 ANXA1P04083 346 aa22.25■■□□□ 1.15
HMGCLL1-202ENST00000308161 COL11A2P13942 1736 aaPredicted RBP22.25■■□□□ 1.15
HMGCLL1-202ENST00000308161 GTF2E1P29083 439 aaPredicted RBP22.25■■□□□ 1.15
HMGCLL1-202ENST00000308161 PDZRN3Q9UPQ7 1066 aa22.25■■□□□ 1.15
HMGCLL1-202ENST00000308161 CHL1O00533 1208 aa22.24■■□□□ 1.15
HMGCLL1-202ENST00000308161 GPTP24298 496 aa22.24■■□□□ 1.15
HMGCLL1-202ENST00000308161 TPTE2Q6XPS3 522 aa22.24■■□□□ 1.15
HMGCLL1-202ENST00000308161 ERBB4Q15303 1308 aa22.23■■□□□ 1.15
HMGCLL1-202ENST00000308161 SENP3-EIF4A1A0A087X0R7 540 aa22.23■■□□□ 1.15
HMGCLL1-202ENST00000308161 RGL2O15211 777 aa22.23■■□□□ 1.15
HMGCLL1-202ENST00000308161 PROSER3Q2NL68 480 aa22.23■■□□□ 1.15
HMGCLL1-202ENST00000308161 ERVV-1B6SEH8 477 aa22.22■■□□□ 1.15
HMGCLL1-202ENST00000308161 ANP32CO43423 234 aa22.21■■□□□ 1.15
HMGCLL1-202ENST00000308161 C21orf2O43822 256 aa22.21■■□□□ 1.15
HMGCLL1-202ENST00000308161 SRGNP10124 158 aa22.2■■□□□ 1.14
HMGCLL1-202ENST00000308161 AIMP1Q12904 312 aaKnown RBP22.2■■□□□ 1.14
HMGCLL1-202ENST00000308161 PDIA6Q15084 440 aa22.2■■□□□ 1.14
HMGCLL1-202ENST00000308161 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
HMGCLL1-202ENST00000308161 CNKSR1Q969H4 720 aa22.2■■□□□ 1.14
HMGCLL1-202ENST00000308161 STYK1Q6J9G0 422 aa22.19■■□□□ 1.14
HMGCLL1-202ENST00000308161 MASTLQ96GX5 879 aa22.19■■□□□ 1.14
HMGCLL1-202ENST00000308161 CFAP44Q96MT7 982 aa22.19■■□□□ 1.14
HMGCLL1-202ENST00000308161 NUP98P52948 1817 aa22.18■■□□□ 1.14
HMGCLL1-202ENST00000308161 PRPF40BQ6NWY9 871 aaKnown RBP22.18■■□□□ 1.14
HMGCLL1-202ENST00000308161 NYXQ9GZU5 481 aa22.18■■□□□ 1.14
HMGCLL1-202ENST00000308161 MRS2Q9HD23 443 aa22.18■■□□□ 1.14
HMGCLL1-202ENST00000308161 CACNA1SQ13698 1873 aa22.18■■□□□ 1.14
HMGCLL1-202ENST00000308161 HDGFL1Q5TGJ6 251 aa22.17■■□□□ 1.14
HMGCLL1-202ENST00000308161 LRP10Q7Z4F1 713 aa22.17■■□□□ 1.14
HMGCLL1-202ENST00000308161 MBIPQ9NS73 344 aa22.17■■□□□ 1.14
HMGCLL1-202ENST00000308161 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
HMGCLL1-202ENST00000308161 ABCC12Q96J65 1359 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 NFKBIEO00221 500 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 LMNB1P20700 586 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 ERFEQ4G0M1 354 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 GIGYF2Q6Y7W6 1299 aaKnown RBP22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 COPS6Q7L5N1 327 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 XAGE3Q8WTP9 111 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 NMRK2Q9NPI5 230 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 CHPF2Q9P2E5 772 aa22.16■■□□□ 1.14
HMGCLL1-202ENST00000308161 NPR1P16066 1061 aa22.15■■□□□ 1.14
HMGCLL1-202ENST00000308161 CALD1Q05682 793 aaKnown RBP22.15■■□□□ 1.14
HMGCLL1-202ENST00000308161 SUSD4Q5VX71 490 aa22.15■■□□□ 1.14
HMGCLL1-202ENST00000308161 SBF1O95248 1867 aa22.14■■□□□ 1.14
HMGCLL1-202ENST00000308161 KIF3CO14782 793 aa22.14■■□□□ 1.14
HMGCLL1-202ENST00000308161 PRELPP51888 382 aa22.14■■□□□ 1.14
HMGCLL1-202ENST00000308161 DUSP27Q5VZP5 1158 aa22.14■■□□□ 1.14
HMGCLL1-202ENST00000308161 DDX21Q9NR30 783 aaKnown RBP eCLIP22.14■■□□□ 1.14
HMGCLL1-202ENST00000308161 SLX4Q8IY92 1834 aa22.14■■□□□ 1.13
HMGCLL1-202ENST00000308161 GNAI1P63096 354 aa22.13■■□□□ 1.13
HMGCLL1-202ENST00000308161 ZNF34Q8IZ26 560 aa22.13■■□□□ 1.13
HMGCLL1-202ENST00000308161 IFT57Q9NWB7 429 aa22.13■■□□□ 1.13
HMGCLL1-202ENST00000308161 TNRC6CQ9HCJ0 1690 aaKnown RBP22.13■■□□□ 1.13
HMGCLL1-202ENST00000308161 ELL2O00472 640 aaPredicted RBP22.12■■□□□ 1.13
HMGCLL1-202ENST00000308161 HOXB7P09629 217 aa22.11■■□□□ 1.13
HMGCLL1-202ENST00000308161 PPP1R42Q7Z4L9 355 aa22.11■■□□□ 1.13
HMGCLL1-202ENST00000308161 TAOK3Q9H2K8 898 aa22.11■■□□□ 1.13
HMGCLL1-202ENST00000308161 KDM2BQ8NHM5 1336 aa22.11■■□□□ 1.13
HMGCLL1-202ENST00000308161 KLRG2A4D1S0 409 aaPredicted RBP22.1■■□□□ 1.13
HMGCLL1-202ENST00000308161 NTSR2O95665 410 aa22.1■■□□□ 1.13
HMGCLL1-202ENST00000308161 ZNF853P0CG23 659 aa22.1■■□□□ 1.13
HMGCLL1-202ENST00000308161 PARP10Q53GL7 1025 aa22.1■■□□□ 1.13
HMGCLL1-202ENST00000308161 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
HMGCLL1-202ENST00000308161 ZNF428Q96B54 188 aa22.1■■□□□ 1.13
HMGCLL1-202ENST00000308161 RPGRQ92834 1020 aaKnown RBP22.09■■□□□ 1.13
HMGCLL1-202ENST00000308161 DBF4Q9UBU7 674 aaPredicted RBP22.09■■□□□ 1.13
HMGCLL1-202ENST00000308161 IBTKQ9P2D0 1353 aaPredicted RBP22.09■■□□□ 1.13
HMGCLL1-202ENST00000308161 CCDC88AQ3V6T2 1871 aa22.08■■□□□ 1.13
HMGCLL1-202ENST00000308161 CCDC93Q567U6 631 aa22.08■■□□□ 1.13
HMGCLL1-202ENST00000308161 HSP90AB3PQ58FF7 597 aa22.08■■□□□ 1.13
HMGCLL1-202ENST00000308161 OLFM4Q6UX06 510 aa22.08■■□□□ 1.13
HMGCLL1-202ENST00000308161 UTP14AQ9BVJ6 771 aaKnown RBP22.08■■□□□ 1.13
HMGCLL1-202ENST00000308161 ARFGEF2Q9Y6D5 1785 aa22.08■■□□□ 1.13
HMGCLL1-202ENST00000308161 TIAM2Q8IVF5 1701 aa22.08■■□□□ 1.12
HMGCLL1-202ENST00000308161 ALDH1B1P30837 517 aa22.07■■□□□ 1.12
HMGCLL1-202ENST00000308161 C16orf71Q8IYS4 520 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms