RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 CARMIL1Q5VZK9 1371 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 KTN1Q86UP2 1357 aaKnown RBP3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 CCDC194A0A1B0GVG4 234 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 KCNJ4P48050 445 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 PSME1Q06323 249 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 NBPF8Q3BBV2 869 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 HELBQ8NG08 1087 aaPredicted RBP3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 LRRN4Q8WUT4 740 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 RNF39Q9H2S5 420 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 ZMIZ1Q9ULJ6 1067 aa3.96□□□□□ -1.77
RAPGEF6-202ENST00000308008 NKTRP30414 1462 aaKnown RBP3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 SCAMP3O14828 347 aaKnown RBP3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 CHMP4BP1P59074 171 aa3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 RPS6KC1Q96S38 1066 aa3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 U2SURPO15042 1029 aaKnown RBP3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 MAFGO15525 162 aa3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 HSP90AB1P08238 724 aaKnown RBP3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 MNX1P50219 401 aaPredicted RBP3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 LARGE2Q8N3Y3 721 aa3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 TBC1D32Q96NH3 1257 aa3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 IFT57Q9NWB7 429 aa3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 RCAN3Q9UKA8 241 aa3.96□□□□□ -1.78
RAPGEF6-202ENST00000308008 GYS2P54840 703 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 SRPK2P78362 688 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 CTDSPL2Q05D32 466 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 DNAJC21Q5F1R6 531 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 PHLDB3Q6NSJ2 640 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 LARP1Q6PKG0 1096 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 RBSNQ9H1K0 784 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 BCL2L12Q9HB09 334 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 ARHGAP35Q9NRY4 1499 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZBBXA8MT70 800 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 STK10O94804 968 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 ODR4Q5SWX8 454 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 NLGN1Q8N2Q7 840 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZCRB1Q8TBF4 217 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 FAM200AQ8TCP9 573 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 EPS8L1Q8TE68 723 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 KCNB2Q92953 911 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 TIAM1Q13009 1591 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 UGGT1Q9NYU2 1555 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 SLIT1O75093 1534 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 ERBB3P21860 1342 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 RAD50Q92878 1312 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 SHANK2Q9UPX8 1470 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 CTIFO43310 598 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 CD2BP2O95400 341 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 CRTC2Q53ET0 693 aaPredicted RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 JAZF1Q86VZ6 243 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 GAS2L2Q8NHY3 880 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 FAM163AQ96GL9 167 aaPredicted RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 NEUROD4Q9HD90 331 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 ST7Q9NRC1 585 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 LCMT1Q9UIC8 334 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 CASZ1Q86V15 1759 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 CHD4Q14839 1912 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 TRIM6-TRIM34B2RNG4 842 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 DIXDC1Q155Q3 683 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 RNF217Q8TC41 542 aa3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 MKRN1Q9UHC7 482 aaKnown RBP3.95□□□□□ -1.78
RAPGEF6-202ENST00000308008 PRXQ9BXM0 1461 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 NAIPQ13075 1403 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 PRELPP51888 382 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 EVA1CP58658 441 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 NAA30Q147X3 362 aaPredicted RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 TERF2Q15554 542 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 CTNNA3Q9UI47 895 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 ZKSCAN5Q9Y2L8 839 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 IBTKQ9P2D0 1353 aaPredicted RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 EIF2AK4Q9P2K8 1649 aaKnown RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 GIGYF1O75420 1035 aaPredicted RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 HS1BP3Q53T59 392 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 SASS6Q6UVJ0 657 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 HINFPQ9BQA5 517 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 CICQ96RK0 1608 aaPredicted RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 MYO5CQ9NQX4 1742 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 NWD2Q9ULI1 1742 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 SPATA31A6Q5VVP1 1343 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 FMN1Q68DA7 1419 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 SCAPERQ9BY12 1400 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 KIAA1107Q9UPP5 1409 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L3A6NCW0 530 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L4A6NCW7 530 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 MAP3K13O43283 966 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 SSFA2P28290 1259 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 CNGA1P29973 690 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 PRIM1P49642 420 aaKnown RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L2Q6R6M4 530 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 CLEC17AQ6ZS10 378 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 USP17L1Q7RTZ2 530 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 METTL3Q86U44 580 aaKnown RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 FERMT3Q86UX7 667 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 C17orf53Q8N3J3 647 aaPredicted RBP3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 RDH13Q8NBN7 331 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 MRFAP1L1Q96HT8 127 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 CEP89Q96ST8 783 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 RAD54L2Q9Y4B4 1467 aa3.94□□□□□ -1.78
RAPGEF6-202ENST00000308008 PTMAP06454 111 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms