RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ARFGEF2Q9Y6D5 1785 aa19.54■□□□□ 0.72
HERPUD1-201ENST00000300302 ACSBG1Q96GR2 724 aa19.54■□□□□ 0.72
HERPUD1-201ENST00000300302 UTYO14607 1347 aa19.53■□□□□ 0.72
HERPUD1-201ENST00000300302 PNMA6EA0A0J9YXQ4 647 aa19.53■□□□□ 0.72
HERPUD1-201ENST00000300302 NEURL1BA8MQ27 555 aa19.53■□□□□ 0.72
HERPUD1-201ENST00000300302 IGKV5-2P06315 115 aa19.53■□□□□ 0.72
HERPUD1-201ENST00000300302 SSH3Q8TE77 659 aa19.52■□□□□ 0.72
HERPUD1-201ENST00000300302 GCKRQ14397 625 aa19.52■□□□□ 0.71
HERPUD1-201ENST00000300302 THSD7AQ9UPZ6 1657 aa19.51■□□□□ 0.71
HERPUD1-201ENST00000300302 ONECUT3O60422 494 aaPredicted RBP19.51■□□□□ 0.71
HERPUD1-201ENST00000300302 PPP1R42Q7Z4L9 355 aa19.51■□□□□ 0.71
HERPUD1-201ENST00000300302 SEPT12Q8IYM1 358 aa19.51■□□□□ 0.71
HERPUD1-201ENST00000300302 FAM182BQ5T319 152 aa19.5■□□□□ 0.71
HERPUD1-201ENST00000300302 SRGAP3O43295 1099 aa19.5■□□□□ 0.71
HERPUD1-201ENST00000300302 MTX1Q13505 466 aa19.5■□□□□ 0.71
HERPUD1-201ENST00000300302 POLA2Q14181 598 aa19.5■□□□□ 0.71
HERPUD1-201ENST00000300302 ZNF772Q68DY9 489 aaPredicted RBP19.5■□□□□ 0.71
HERPUD1-201ENST00000300302 TTLL7Q6ZT98 887 aa19.5■□□□□ 0.71
HERPUD1-201ENST00000300302 SMARCC1Q92922 1105 aaPredicted RBP19.5■□□□□ 0.71
HERPUD1-201ENST00000300302 CYP19A1P11511 503 aaPredicted RBP19.49■□□□□ 0.71
HERPUD1-201ENST00000300302 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
HERPUD1-201ENST00000300302 NUP188Q5SRE5 1749 aa19.49■□□□□ 0.71
HERPUD1-201ENST00000300302 AFDNP55196 1824 aaKnown RBP19.48■□□□□ 0.71
HERPUD1-201ENST00000300302 APBB1O00213 710 aa19.48■□□□□ 0.71
HERPUD1-201ENST00000300302 EXOC6BQ9Y2D4 811 aa19.48■□□□□ 0.71
HERPUD1-201ENST00000300302 KIF6Q6ZMV9 814 aa19.48■□□□□ 0.71
HERPUD1-201ENST00000300302 LRRCC1Q9C099 1032 aa19.48■□□□□ 0.71
HERPUD1-201ENST00000300302 TJP1Q07157 1748 aa19.47■□□□□ 0.71
HERPUD1-201ENST00000300302 KCNQ2O43526 872 aa19.47■□□□□ 0.71
HERPUD1-201ENST00000300302 ZNF330Q9Y3S2 320 aaPredicted RBP19.47■□□□□ 0.71
HERPUD1-201ENST00000300302 RAB11FIP3O75154 756 aa19.46■□□□□ 0.71
HERPUD1-201ENST00000300302 HSP90AB4PQ58FF6 505 aa19.46■□□□□ 0.71
HERPUD1-201ENST00000300302 BMP2KLQ5H9B9 411 aa19.46■□□□□ 0.71
HERPUD1-201ENST00000300302 ZBTB3Q9H5J0 574 aa19.46■□□□□ 0.71
HERPUD1-201ENST00000300302 ATP5J2-PTCD1G3V325 749 aa19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 ANP32AP39687 249 aaKnown RBP19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 NPM2Q86SE8 214 aaKnown RBP19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 SUCLG2Q96I99 432 aa19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 PALLDQ8WX93 1383 aa19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 LOC102724428A0A0B4J2F2 783 aa19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 SURF6O75683 361 aaKnown RBP19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 ATP6V1AP38606 617 aa19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 SIK1P57059 783 aa19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 PLEKHM2Q8IWE5 1019 aa19.45■□□□□ 0.7
HERPUD1-201ENST00000300302 A0A087WZG4 1122 aa19.44■□□□□ 0.7
HERPUD1-201ENST00000300302 SMARCA5O60264 1052 aaPredicted RBP19.44■□□□□ 0.7
HERPUD1-201ENST00000300302 RBM6P78332 1123 aaKnown RBP19.44■□□□□ 0.7
HERPUD1-201ENST00000300302 CWC25Q9NXE8 425 aaPredicted RBP19.44■□□□□ 0.7
HERPUD1-201ENST00000300302 COL15A1P39059 1388 aa19.44■□□□□ 0.7
HERPUD1-201ENST00000300302 CICQ96RK0 1608 aaPredicted RBP19.44■□□□□ 0.7
HERPUD1-201ENST00000300302 IL6STP40189 918 aaPredicted RBP19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 CCDC191Q8NCU4 936 aa19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 BICC1Q9H694 974 aaKnown RBP19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 PTF1AQ7RTS3 328 aa19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 KAZALD1Q96I82 304 aa19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 BCL11AQ9H165 835 aa19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 RGS17Q9UGC6 210 aaPredicted RBP19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 ZBTB1Q9Y2K1 713 aa19.43■□□□□ 0.7
HERPUD1-201ENST00000300302 MAP3K15Q6ZN16 1313 aa19.42■□□□□ 0.7
HERPUD1-201ENST00000300302 UBE3BQ7Z3V4 1068 aa19.42■□□□□ 0.7
HERPUD1-201ENST00000300302 TCIRG1Q13488 830 aa19.41■□□□□ 0.7
HERPUD1-201ENST00000300302 C16orf71Q8IYS4 520 aaPredicted RBP19.41■□□□□ 0.7
HERPUD1-201ENST00000300302 ARXQ96QS3 562 aa19.41■□□□□ 0.7
HERPUD1-201ENST00000300302 NOP58Q9Y2X3 529 aaKnown RBP19.41■□□□□ 0.7
HERPUD1-201ENST00000300302 KIF1BPQ96EK5 621 aa19.41■□□□□ 0.7
HERPUD1-201ENST00000300302 CCDC87Q9NVE4 849 aa19.41■□□□□ 0.7
HERPUD1-201ENST00000300302 ZNF831Q5JPB2 1677 aa19.41■□□□□ 0.7
HERPUD1-201ENST00000300302 HSP90AB3PQ58FF7 597 aa19.4■□□□□ 0.7
HERPUD1-201ENST00000300302 UPF2Q9HAU5 1272 aaKnown RBP19.4■□□□□ 0.7
HERPUD1-201ENST00000300302 H7C1W4 665 aa19.39■□□□□ 0.7
HERPUD1-201ENST00000300302 TRIM28Q13263 835 aaKnown RBP19.39■□□□□ 0.7
HERPUD1-201ENST00000300302 OS9Q13438 667 aaPredicted RBP19.39■□□□□ 0.7
HERPUD1-201ENST00000300302 ERC1Q8IUD2 1116 aa19.39■□□□□ 0.7
HERPUD1-201ENST00000300302 ISCA1Q9BUE6 129 aa19.39■□□□□ 0.7
HERPUD1-201ENST00000300302 RXRBP28702 533 aa19.39■□□□□ 0.69
HERPUD1-201ENST00000300302 CRKLP46109 303 aaKnown RBP19.39■□□□□ 0.69
HERPUD1-201ENST00000300302 TTC22Q5TAA0 569 aa19.39■□□□□ 0.69
HERPUD1-201ENST00000300302 GIGYF2Q6Y7W6 1299 aaKnown RBP19.39■□□□□ 0.69
HERPUD1-201ENST00000300302 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
HERPUD1-201ENST00000300302 RHPN1Q8TCX5 695 aa19.39■□□□□ 0.69
HERPUD1-201ENST00000300302 OSBPL3Q9H4L5 887 aa19.39■□□□□ 0.69
HERPUD1-201ENST00000300302 NHSQ6T4R5 1651 aa19.38■□□□□ 0.69
HERPUD1-201ENST00000300302 CASP7P55210 303 aa19.38■□□□□ 0.69
HERPUD1-201ENST00000300302 POTEAQ6S8J7 498 aa19.38■□□□□ 0.69
HERPUD1-201ENST00000300302 OTUD7AQ8TE49 926 aaPredicted RBP19.38■□□□□ 0.69
HERPUD1-201ENST00000300302 ERVV-1B6SEH8 477 aa19.37■□□□□ 0.69
HERPUD1-201ENST00000300302 ITPK1Q13572 414 aa19.37■□□□□ 0.69
HERPUD1-201ENST00000300302 RABL6Q3YEC7 729 aaPredicted RBP19.37■□□□□ 0.69
HERPUD1-201ENST00000300302 INTS5Q6P9B9 1019 aaKnown RBP19.37■□□□□ 0.69
HERPUD1-201ENST00000300302 DZIP3Q86Y13 1208 aaKnown RBP19.37■□□□□ 0.69
HERPUD1-201ENST00000300302 RREB1Q92766 1687 aa19.37■□□□□ 0.69
HERPUD1-201ENST00000300302 EIF5P55010 431 aaKnown RBP19.37■□□□□ 0.69
HERPUD1-201ENST00000300302 PDE1AP54750 535 aa19.36■□□□□ 0.69
HERPUD1-201ENST00000300302 EPHA10Q5JZY3 1008 aa19.36■□□□□ 0.69
HERPUD1-201ENST00000300302 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
HERPUD1-201ENST00000300302 MX1P20591 662 aa19.35■□□□□ 0.69
HERPUD1-201ENST00000300302 G3BP1Q13283 466 aaKnown RBP eCLIP19.35■□□□□ 0.693e-10■■□□□ 13.1
HERPUD1-201ENST00000300302 SALL3Q9BXA9 1300 aa19.35■□□□□ 0.69
HERPUD1-201ENST00000300302 SEC24BO95487 1268 aa19.35■□□□□ 0.69
HERPUD1-201ENST00000300302 GSPT1P15170 499 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms