RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 EBAG9O00559 213 aa17.09■□□□□ 0.33
SCN3B-201ENST00000299333 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
SCN3B-201ENST00000299333 SLC12A5Q9H2X9 1139 aa17.09■□□□□ 0.33
SCN3B-201ENST00000299333 GLRX3O76003 335 aaKnown RBP17.08■□□□□ 0.33
SCN3B-201ENST00000299333 SLU7O95391 586 aaKnown RBP17.08■□□□□ 0.33
SCN3B-201ENST00000299333 CCT2P78371 535 aaKnown RBP17.08■□□□□ 0.33
SCN3B-201ENST00000299333 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.33
SCN3B-201ENST00000299333 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
SCN3B-201ENST00000299333 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.32
SCN3B-201ENST00000299333 CKAP4Q07065 602 aaKnown RBP17.08■□□□□ 0.32
SCN3B-201ENST00000299333 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 BOLA2Q9H3K6 86 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 PHAXQ9H814 394 aaKnown RBP17.07■□□□□ 0.32
SCN3B-201ENST00000299333 GOLIM4O00461 696 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 EHBP1Q8NDI1 1231 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 OPA1O60313 960 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 PHACTR2O75167 634 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
SCN3B-201ENST00000299333 KIF4AO95239 1232 aa17.06■□□□□ 0.32
SCN3B-201ENST00000299333 UBASH3AP57075 661 aa17.06■□□□□ 0.32
SCN3B-201ENST00000299333 ANO6Q4KMQ2 910 aa17.06■□□□□ 0.32
SCN3B-201ENST00000299333 SPTY2D1Q68D10 685 aaPredicted RBP17.06■□□□□ 0.32
SCN3B-201ENST00000299333 KIF3CO14782 793 aa17.06■□□□□ 0.32
SCN3B-201ENST00000299333 ANKS4BQ8N8V4 417 aa17.06■□□□□ 0.32
SCN3B-201ENST00000299333 MIPOL1Q8TD10 442 aa17.06■□□□□ 0.32
SCN3B-201ENST00000299333 KIAA0753Q2KHM9 967 aa17.05■□□□□ 0.32
SCN3B-201ENST00000299333 CCDC85AQ96PX6 553 aaPredicted RBP17.05■□□□□ 0.32
SCN3B-201ENST00000299333 NAP1L3Q99457 506 aaPredicted RBP17.05■□□□□ 0.32
SCN3B-201ENST00000299333 NBPF11Q86T75 865 aa17.05■□□□□ 0.32
SCN3B-201ENST00000299333 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
SCN3B-201ENST00000299333 DDX23Q9BUQ8 820 aaKnown RBP17.05■□□□□ 0.32
SCN3B-201ENST00000299333 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
SCN3B-201ENST00000299333 CCDC40Q4G0X9 1142 aa17.05■□□□□ 0.32
SCN3B-201ENST00000299333 RNF168Q8IYW5 571 aaPredicted RBP17.05■□□□□ 0.32
SCN3B-201ENST00000299333 ZEB2O60315 1214 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 TBC1D9Q6ZT07 1266 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-201ENST00000299333 OGFRQ9NZT2 677 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 SEC63Q9UGP8 760 aaKnown RBP17.04■□□□□ 0.32
SCN3B-201ENST00000299333 CAVIN2O95810 425 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 DNAJC21Q5F1R6 531 aaKnown RBP17.04■□□□□ 0.32
SCN3B-201ENST00000299333 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
SCN3B-201ENST00000299333 RSRC1Q96IZ7 334 aaKnown RBP17.04■□□□□ 0.32
SCN3B-201ENST00000299333 N4BP3O15049 544 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 FERP16591 822 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 TCERG1LQ5VWI1 586 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 GOLGA1Q92805 767 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 TCHPQ9BT92 498 aa17.04■□□□□ 0.32
SCN3B-201ENST00000299333 GOLGA8BA8MQT2 603 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 IKBKGQ9Y6K9 419 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 EHBP1L1Q8N3D4 1523 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 MINDY4BA8MYZ0 360 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 NBPF8Q3BBV2 869 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 AKR1B10O60218 316 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 PPFIA3O75145 1194 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 SSRP1Q08945 709 aaKnown RBP17.03■□□□□ 0.32
SCN3B-201ENST00000299333 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
SCN3B-201ENST00000299333 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 ANKRD30BQ9BXX2 1392 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 CCDC196A0A1B0GTZ2 297 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCN3B-201ENST00000299333 KRBA2Q6ZNG9 492 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 GTF3C6Q969F1 213 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
SCN3B-201ENST00000299333 KIF5BP33176 963 aa17.02■□□□□ 0.32
SCN3B-201ENST00000299333 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
SCN3B-201ENST00000299333 APBB1IPQ7Z5R6 666 aaPredicted RBP17.02■□□□□ 0.32
SCN3B-201ENST00000299333 SELENOSQ9BQE4 189 aa17.02■□□□□ 0.32
SCN3B-201ENST00000299333 A0A1B0GUL7 405 aa17.02■□□□□ 0.32
SCN3B-201ENST00000299333 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.31
SCN3B-201ENST00000299333 ZSCAN29Q8IWY8 852 aaPredicted RBP17.02■□□□□ 0.31
SCN3B-201ENST00000299333 HFM1A2PYH4 1435 aa17.02■□□□□ 0.31
SCN3B-201ENST00000299333 CABP4P57796 275 aa17.02■□□□□ 0.31
SCN3B-201ENST00000299333 CCDC102BQ68D86 513 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 GOLGA8AA7E2F4 631 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
SCN3B-201ENST00000299333 FAM200AQ8TCP9 573 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 KIF20AO95235 890 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 COMMD10Q9Y6G5 202 aa17.01■□□□□ 0.31
SCN3B-201ENST00000299333 TMEM266Q2M3C6 531 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 PRDM2Q13029 1718 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 IDEP14735 1019 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
SCN3B-201ENST00000299333 RAB34Q9BZG1 259 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
SCN3B-201ENST00000299333 NLRP5P59047 1200 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 CPLX4Q7Z7G2 160 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 CTAGE9A4FU28 777 aa17■□□□□ 0.31
SCN3B-201ENST00000299333 SYT1P21579 422 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms