RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 NPM2Q86SE8 214 aaKnown RBP27.7■■■□□ 2.02
SMCO4-201ENST00000298966 TBC1D2BQ9UPU7 963 aa27.7■■■□□ 2.02
SMCO4-201ENST00000298966 SOGA3Q5TF21 947 aa27.69■■■□□ 2.02
SMCO4-201ENST00000298966 POTEIP0CG38 1075 aa27.68■■■□□ 2.02
SMCO4-201ENST00000298966 POTEJP0CG39 1038 aa27.68■■■□□ 2.02
SMCO4-201ENST00000298966 IL6STP40189 918 aaPredicted RBP27.68■■■□□ 2.02
SMCO4-201ENST00000298966 STYK1Q6J9G0 422 aa27.68■■■□□ 2.02
SMCO4-201ENST00000298966 CNBD1Q8NA66 436 aa27.68■■■□□ 2.02
SMCO4-201ENST00000298966 ZNF496Q96IT1 587 aaPredicted RBP27.68■■■□□ 2.02
SMCO4-201ENST00000298966 SETDB2Q96T68 719 aa27.68■■■□□ 2.02
SMCO4-201ENST00000298966 SLX4Q8IY92 1834 aa27.68■■■□□ 2.02
SMCO4-201ENST00000298966 HEG1Q9ULI3 1381 aa27.68■■■□□ 2.02
SMCO4-201ENST00000298966 IQCA1LA6NCM1 817 aa27.67■■■□□ 2.02
SMCO4-201ENST00000298966 DIAPH1O60610 1272 aaKnown RBP27.67■■■□□ 2.02
SMCO4-201ENST00000298966 TEFQ10587 303 aa27.67■■■□□ 2.02
SMCO4-201ENST00000298966 CNTNAP1P78357 1384 aa27.66■■■□□ 2.02
SMCO4-201ENST00000298966 ST5P78524 1137 aa27.66■■■□□ 2.02
SMCO4-201ENST00000298966 ARFGEF2Q9Y6D5 1785 aa27.65■■■□□ 2.02
SMCO4-201ENST00000298966 FOXN1O15353 648 aa27.65■■■□□ 2.02
SMCO4-201ENST00000298966 WDR43Q15061 677 aaKnown RBP eCLIP27.65■■■□□ 2.02
SMCO4-201ENST00000298966 PRPF40BQ6NWY9 871 aaKnown RBP27.65■■■□□ 2.02
SMCO4-201ENST00000298966 ZNF790Q6PG37 636 aa27.65■■■□□ 2.02
SMCO4-201ENST00000298966 LDHDQ86WU2 507 aa27.65■■■□□ 2.02
SMCO4-201ENST00000298966 SCN4AP35499 1836 aa27.64■■■□□ 2.02
SMCO4-201ENST00000298966 SRGNP10124 158 aa27.64■■■□□ 2.02
SMCO4-201ENST00000298966 MASTLQ96GX5 879 aa27.64■■■□□ 2.02
SMCO4-201ENST00000298966 PRDM10Q9NQV6 1147 aa27.64■■■□□ 2.02
SMCO4-201ENST00000298966 AIDAQ96BJ3 306 aa27.63■■■□□ 2.01
SMCO4-201ENST00000298966 PASKQ96RG2 1323 aa27.62■■■□□ 2.01
SMCO4-201ENST00000298966 CAMTA2O94983 1202 aa27.61■■■□□ 2.01
SMCO4-201ENST00000298966 FMNL2Q96PY5 1086 aa27.61■■■□□ 2.01
SMCO4-201ENST00000298966 GNAT3A8MTJ3 354 aa27.6■■■□□ 2.01
SMCO4-201ENST00000298966 CTCFP49711 727 aaPredicted RBP27.6■■■□□ 2.01
SMCO4-201ENST00000298966 IL17REQ8NFR9 667 aa27.6■■■□□ 2.01
SMCO4-201ENST00000298966 GAS2L2Q8NHY3 880 aa27.6■■■□□ 2.01
SMCO4-201ENST00000298966 L3MBTL3Q96JM7 780 aaPredicted RBP27.6■■■□□ 2.01
SMCO4-201ENST00000298966 TAF1DQ9H5J8 278 aaPredicted RBP27.6■■■□□ 2.01
SMCO4-201ENST00000298966 SIPA1L3O60292 1781 aaPredicted RBP27.6■■■□□ 2.01
SMCO4-201ENST00000298966 BCORQ6W2J9 1755 aa27.59■■■□□ 2.01
SMCO4-201ENST00000298966 A1BGP04217 495 aa27.59■■■□□ 2.01
SMCO4-201ENST00000298966 CCDC93Q567U6 631 aa27.59■■■□□ 2.01
SMCO4-201ENST00000298966 COL3A1P02461 1466 aaPredicted RBP27.58■■■□□ 2.01
SMCO4-201ENST00000298966 TMEM88BA6NKF7 163 aa27.58■■■□□ 2.01
SMCO4-201ENST00000298966 DZIP3Q86Y13 1208 aaKnown RBP27.58■■■□□ 2.01
SMCO4-201ENST00000298966 NUDCQ9Y266 331 aa27.58■■■□□ 2.01
SMCO4-201ENST00000298966 VEGFBP49765 207 aa27.57■■■□□ 2
SMCO4-201ENST00000298966 HNRNPUQ00839 825 aaKnown RBP eCLIP27.57■■■□□ 2
SMCO4-201ENST00000298966 EAPPQ56P03 285 aaPredicted RBP27.56■■■□□ 2
SMCO4-201ENST00000298966 NBPF5PQ86XG9 351 aaPredicted RBP27.55■■■□□ 2
SMCO4-201ENST00000298966 CLEC11AQ9Y240 323 aa27.55■■■□□ 2
SMCO4-201ENST00000298966 U2SURPO15042 1029 aaKnown RBP27.54■■■□□ 2
SMCO4-201ENST00000298966 NPR1P16066 1061 aa27.54■■■□□ 2
SMCO4-201ENST00000298966 C7orf43Q8WVR3 580 aa27.54■■■□□ 2
SMCO4-201ENST00000298966 HACL1Q9UJ83 578 aa27.54■■■□□ 2
SMCO4-201ENST00000298966 ZBED9Q6R2W3 1325 aa27.53■■■□□ 2
SMCO4-201ENST00000298966 ITGBL1O95965 494 aaPredicted RBP27.53■■■□□ 2
SMCO4-201ENST00000298966 FKBP4Q02790 459 aaKnown RBP eCLIP27.53■■■□□ 2
SMCO4-201ENST00000298966 CLEC4GQ6UXB4 293 aa27.52■■■□□ 2
SMCO4-201ENST00000298966 ZNF652Q9Y2D9 606 aa27.52■■■□□ 2
SMCO4-201ENST00000298966 ZNF541Q9H0D2 1346 aa27.51■■□□□ 1.99
SMCO4-201ENST00000298966 WBP1LQ9NX94 342 aa27.51■■□□□ 1.99
SMCO4-201ENST00000298966 ADAMTS8Q9UP79 889 aa27.51■■□□□ 1.99
SMCO4-201ENST00000298966 BTBD11A6QL63 1104 aa27.5■■□□□ 1.99
SMCO4-201ENST00000298966 EPHX2P34913 555 aa27.5■■□□□ 1.99
SMCO4-201ENST00000298966 NGEFQ8N5V2 710 aa27.5■■□□□ 1.99
SMCO4-201ENST00000298966 ZNF277Q9NRM2 450 aaPredicted RBP27.5■■□□□ 1.99
SMCO4-201ENST00000298966 KCNQ3O43525 872 aa27.49■■□□□ 1.99
SMCO4-201ENST00000298966 LBX1P52954 281 aa27.49■■□□□ 1.99
SMCO4-201ENST00000298966 PNMA8AQ86V59 439 aaPredicted RBP27.49■■□□□ 1.99
SMCO4-201ENST00000298966 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
SMCO4-201ENST00000298966 RTKN2Q8IZC4 609 aa27.48■■□□□ 1.99
SMCO4-201ENST00000298966 PNNQ9H307 717 aaKnown RBP27.48■■□□□ 1.99
SMCO4-201ENST00000298966 USP16Q9Y5T5 823 aa27.48■■□□□ 1.99
SMCO4-201ENST00000298966 PIP4K2AP48426 406 aaPredicted RBP27.47■■□□□ 1.99
SMCO4-201ENST00000298966 DEFB115Q30KQ5 88 aa27.47■■□□□ 1.99
SMCO4-201ENST00000298966 TPTE2Q6XPS3 522 aa27.47■■□□□ 1.99
SMCO4-201ENST00000298966 ADAMTSL1Q8N6G6 1762 aa27.47■■□□□ 1.99
SMCO4-201ENST00000298966 KLRG2A4D1S0 409 aaPredicted RBP27.46■■□□□ 1.99
SMCO4-201ENST00000298966 CNTROBQ8N137 903 aa27.46■■□□□ 1.99
SMCO4-201ENST00000298966 RASSF10A6NK89 507 aa27.45■■□□□ 1.98
SMCO4-201ENST00000298966 NIP7Q9Y221 180 aaKnown RBP eCLIP27.45■■□□□ 1.98
SMCO4-201ENST00000298966 RNF123Q5XPI4 1314 aa27.44■■□□□ 1.98
SMCO4-201ENST00000298966 IARSP41252 1262 aaKnown RBP27.44■■□□□ 1.98
SMCO4-201ENST00000298966 MAP1SQ66K74 1059 aaPredicted RBP27.44■■□□□ 1.98
SMCO4-201ENST00000298966 ALDH1B1P30837 517 aa27.43■■□□□ 1.98
SMCO4-201ENST00000298966 MAP2K1Q02750 393 aaPredicted RBP27.43■■□□□ 1.98
SMCO4-201ENST00000298966 OLFM4Q6UX06 510 aa27.43■■□□□ 1.98
SMCO4-201ENST00000298966 FZD9O00144 591 aa27.42■■□□□ 1.98
SMCO4-201ENST00000298966 RGL2O15211 777 aa27.42■■□□□ 1.98
SMCO4-201ENST00000298966 SNRPA1P09661 255 aaKnown RBP27.42■■□□□ 1.98
SMCO4-201ENST00000298966 HSPA8P11142 646 aaKnown RBP27.42■■□□□ 1.98
SMCO4-201ENST00000298966 NCBP3Q53F19 620 aaKnown RBP27.42■■□□□ 1.98
SMCO4-201ENST00000298966 GPC2Q8N158 579 aa27.42■■□□□ 1.98
SMCO4-201ENST00000298966 SYNE4Q8N205 404 aa27.42■■□□□ 1.98
SMCO4-201ENST00000298966 ABT1Q9ULW3 272 aaKnown RBP27.42■■□□□ 1.98
SMCO4-201ENST00000298966 FAM177BA6PVY3 158 aa27.41■■□□□ 1.98
SMCO4-201ENST00000298966 WDR33Q9C0J8 1336 aaKnown RBP27.41■■□□□ 1.98
SMCO4-201ENST00000298966 PRAMEF22A3QJZ6 481 aa27.4■■□□□ 1.98
SMCO4-201ENST00000298966 GTF2E1P29083 439 aaPredicted RBP27.4■■□□□ 1.98
SMCO4-201ENST00000298966 JDP2Q8WYK2 163 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms