RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 HOMER1Q86YM7 354 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
TRUB1-201ENST00000298746 ARHGEF40Q8TER5 1519 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 SKILP12757 684 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 ZNF75DP51815 510 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 ME3Q16798 604 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 ESF1Q9H501 851 aaKnown RBP13.48□□□□□ -0.25
TRUB1-201ENST00000298746 NRDCO43847 1150 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 GLRX3O76003 335 aaKnown RBP13.48□□□□□ -0.25
TRUB1-201ENST00000298746 POGZQ7Z3K3 1410 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 ANKRD7Q92527 254 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 CCDC9Q9Y3X0 531 aaKnown RBP13.48□□□□□ -0.25
TRUB1-201ENST00000298746 PTH1RQ03431 593 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 CACTINQ8WUQ7 758 aaKnown RBP13.48□□□□□ -0.25
TRUB1-201ENST00000298746 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
TRUB1-201ENST00000298746 DDX19AQ9NUU7 478 aaKnown RBP13.48□□□□□ -0.25
TRUB1-201ENST00000298746 HYPKQ9NX55 129 aa13.48□□□□□ -0.25
TRUB1-201ENST00000298746 ABCC3O15438 1527 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 ANXA1P04083 346 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 PSMA5P28066 241 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
TRUB1-201ENST00000298746 TAF7Q15545 349 aaPredicted RBP13.47□□□□□ -0.25
TRUB1-201ENST00000298746 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 LSG1Q9H089 658 aaKnown RBP13.47□□□□□ -0.25
TRUB1-201ENST00000298746 USP44Q9H0E7 712 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 PHAXQ9H814 394 aaKnown RBP13.47□□□□□ -0.25
TRUB1-201ENST00000298746 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 DEPDC5O75140 1603 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 CAMSAP1Q5T5Y3 1602 aa13.47□□□□□ -0.25
TRUB1-201ENST00000298746 HSP90AB4PQ58FF6 505 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 KIAA0232Q92628 1395 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 ELF2Q15723 593 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 CCDC73Q6ZRK6 1079 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 AACSQ86V21 672 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 KIF18AQ8NI77 898 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 CTNNA3Q9UI47 895 aa13.46□□□□□ -0.25
TRUB1-201ENST00000298746 RBM8AQ9Y5S9 174 aaKnown RBP13.46□□□□□ -0.25
TRUB1-201ENST00000298746 ARID5BQ14865 1188 aa13.46□□□□□ -0.26
TRUB1-201ENST00000298746 VPS53Q5VIR6 699 aa13.46□□□□□ -0.26
TRUB1-201ENST00000298746 LARP1Q6PKG0 1096 aaKnown RBP13.46□□□□□ -0.26
TRUB1-201ENST00000298746 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.26
TRUB1-201ENST00000298746 TTC14Q96N46 770 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 A0A087WWV3 80 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 NR1I2O75469 434 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 NGDNQ8NEJ9 315 aaKnown RBP13.45□□□□□ -0.26
TRUB1-201ENST00000298746 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 SIL1Q9H173 461 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 ZC3H13Q5T200 1668 aaKnown RBP13.45□□□□□ -0.26
TRUB1-201ENST00000298746 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
TRUB1-201ENST00000298746 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
TRUB1-201ENST00000298746 SMC2O95347 1197 aa13.45□□□□□ -0.26
TRUB1-201ENST00000298746 GABPB1Q06547 395 aaPredicted RBP13.45□□□□□ -0.26
TRUB1-201ENST00000298746 ZNF397Q8NF99 534 aaPredicted RBP13.45□□□□□ -0.26
TRUB1-201ENST00000298746 CD163L1Q9NR16 1453 aa13.44□□□□□ -0.26
TRUB1-201ENST00000298746 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
TRUB1-201ENST00000298746 NBPF7P0C2Y1 421 aaPredicted RBP13.44□□□□□ -0.26
TRUB1-201ENST00000298746 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
TRUB1-201ENST00000298746 BOLA2Q9H3K6 86 aa13.44□□□□□ -0.26
TRUB1-201ENST00000298746 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
TRUB1-201ENST00000298746 SF3A1Q15459 793 aaKnown RBP13.44□□□□□ -0.26
TRUB1-201ENST00000298746 ERCC4Q92889 916 aaPredicted RBP13.44□□□□□ -0.26
TRUB1-201ENST00000298746 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
TRUB1-201ENST00000298746 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
TRUB1-201ENST00000298746 ASXL2Q76L83 1435 aa13.43□□□□□ -0.26
TRUB1-201ENST00000298746 TNNT3P45378 269 aaPredicted RBP13.43□□□□□ -0.26
TRUB1-201ENST00000298746 LEO1Q8WVC0 666 aaPredicted RBP13.43□□□□□ -0.26
TRUB1-201ENST00000298746 ECHDC1Q9NTX5 307 aa13.43□□□□□ -0.26
TRUB1-201ENST00000298746 DDX41Q9UJV9 622 aaKnown RBP13.43□□□□□ -0.26
TRUB1-201ENST00000298746 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
TRUB1-201ENST00000298746 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
TRUB1-201ENST00000298746 POLR3GO15318 223 aaPredicted RBP13.43□□□□□ -0.26
TRUB1-201ENST00000298746 CREB3L3Q68CJ9 461 aa13.43□□□□□ -0.26
TRUB1-201ENST00000298746 PI4KAP1Q8N8J0 262 aa13.43□□□□□ -0.26
TRUB1-201ENST00000298746 CHD1O14646 1710 aa13.43□□□□□ -0.26
TRUB1-201ENST00000298746 CPSF1Q10570 1443 aaKnown RBP13.43□□□□□ -0.26
TRUB1-201ENST00000298746 EDC4Q6P2E9 1401 aaKnown RBP13.43□□□□□ -0.26
TRUB1-201ENST00000298746 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 ME1P48163 572 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 GNL2Q13823 731 aaKnown RBP13.42□□□□□ -0.26
TRUB1-201ENST00000298746 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 TIGD1Q96MW7 591 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 MAP3K19Q56UN5 1328 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 USP27XA6NNY8 438 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 GNAT3A8MTJ3 354 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRUB1-201ENST00000298746 FAM177A1Q8N128 213 aaPredicted RBP13.42□□□□□ -0.26
TRUB1-201ENST00000298746 PI4K2BQ8TCG2 481 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 PPLO60437 1756 aa13.42□□□□□ -0.26
TRUB1-201ENST00000298746 GUCY1B3Q02153 619 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms