RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 UTYO14607 1347 aa31.74■■■□□ 2.67
SDCCAG3-201ENST00000298537 PDE1AP54750 535 aa31.74■■■□□ 2.67
SDCCAG3-201ENST00000298537 DDRGK1Q96HY6 314 aa31.74■■■□□ 2.67
SDCCAG3-201ENST00000298537 UPF2Q9HAU5 1272 aaKnown RBP31.74■■■□□ 2.67
SDCCAG3-201ENST00000298537 SLC4A9Q96Q91 983 aa31.73■■■□□ 2.67
SDCCAG3-201ENST00000298537 EPHA10Q5JZY3 1008 aa31.72■■■□□ 2.67
SDCCAG3-201ENST00000298537 SPATA31A5Q5VU36 1347 aa31.72■■■□□ 2.67
SDCCAG3-201ENST00000298537 SPATA31A7Q8IWB4 1347 aa31.72■■■□□ 2.67
SDCCAG3-201ENST00000298537 SDSP20132 328 aa31.72■■■□□ 2.67
SDCCAG3-201ENST00000298537 PRIM1P49642 420 aaKnown RBP31.72■■■□□ 2.67
SDCCAG3-201ENST00000298537 SLIT2O94813 1529 aa31.72■■■□□ 2.67
SDCCAG3-201ENST00000298537 BCL9O00512 1426 aa31.72■■■□□ 2.67
SDCCAG3-201ENST00000298537 PLBD2Q8NHP8 589 aa31.71■■■□□ 2.67
SDCCAG3-201ENST00000298537 C8orf37Q96NL8 207 aa31.71■■■□□ 2.67
SDCCAG3-201ENST00000298537 ZBTB3Q9H5J0 574 aa31.71■■■□□ 2.67
SDCCAG3-201ENST00000298537 ZNF330Q9Y3S2 320 aaPredicted RBP31.71■■■□□ 2.67
SDCCAG3-201ENST00000298537 ARFGEF2Q9Y6D5 1785 aa31.71■■■□□ 2.67
SDCCAG3-201ENST00000298537 MTX1Q13505 466 aa31.7■■■□□ 2.67
SDCCAG3-201ENST00000298537 DDB1Q16531 1140 aa31.7■■■□□ 2.67
SDCCAG3-201ENST00000298537 C22orf23Q9BZE7 217 aa31.7■■■□□ 2.67
SDCCAG3-201ENST00000298537 NUTM1Q86Y26 1132 aa31.7■■■□□ 2.66
SDCCAG3-201ENST00000298537 A0A0G2JS52 829 aa31.69■■■□□ 2.66
SDCCAG3-201ENST00000298537 RHPN1Q8TCX5 695 aa31.69■■■□□ 2.66
SDCCAG3-201ENST00000298537 ACSBG1Q96GR2 724 aa31.69■■■□□ 2.66
SDCCAG3-201ENST00000298537 ERBB4Q15303 1308 aa31.69■■■□□ 2.66
SDCCAG3-201ENST00000298537 MARCH10Q8NA82 808 aaPredicted RBP31.69■■■□□ 2.66
SDCCAG3-201ENST00000298537 CDC45O75419 566 aa31.66■■■□□ 2.66
SDCCAG3-201ENST00000298537 KLHDC4Q8TBB5 520 aa31.66■■■□□ 2.66
SDCCAG3-201ENST00000298537 OSBPL3Q9H4L5 887 aa31.66■■■□□ 2.66
SDCCAG3-201ENST00000298537 MX1P20591 662 aa31.66■■■□□ 2.66
SDCCAG3-201ENST00000298537 RTL5Q5HYW3 569 aaPredicted RBP31.66■■■□□ 2.66
SDCCAG3-201ENST00000298537 UBE3BQ7Z3V4 1068 aa31.65■■■□□ 2.66
SDCCAG3-201ENST00000298537 THRAP3Q9Y2W1 955 aaKnown RBP31.65■■■□□ 2.66
SDCCAG3-201ENST00000298537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.65■■■□□ 2.66
SDCCAG3-201ENST00000298537 NGLY1Q96IV0 654 aa31.64■■■□□ 2.66
SDCCAG3-201ENST00000298537 DOT1LQ8TEK3 1739 aa31.64■■■□□ 2.65
SDCCAG3-201ENST00000298537 ANP32EQ9BTT0 268 aa31.63■■■□□ 2.65
SDCCAG3-201ENST00000298537 AFDNP55196 1824 aaKnown RBP31.63■■■□□ 2.65
SDCCAG3-201ENST00000298537 A0A087WZG4 1122 aa31.63■■■□□ 2.65
SDCCAG3-201ENST00000298537 RAB11FIP3O75154 756 aa31.63■■■□□ 2.65
SDCCAG3-201ENST00000298537 FAM98CQ17RN3 349 aaKnown RBP31.62■■■□□ 2.65
SDCCAG3-201ENST00000298537 UNC5CLQ8IV45 518 aa31.61■■■□□ 2.65
SDCCAG3-201ENST00000298537 CDCA7Q9BWT1 371 aaPredicted RBP31.61■■■□□ 2.65
SDCCAG3-201ENST00000298537 OS9Q13438 667 aaPredicted RBP31.61■■■□□ 2.65
SDCCAG3-201ENST00000298537 KIF1BPQ96EK5 621 aa31.61■■■□□ 2.65
SDCCAG3-201ENST00000298537 LRP6O75581 1613 aa31.61■■■□□ 2.65
SDCCAG3-201ENST00000298537 BCL9LQ86UU0 1499 aa31.6■■■□□ 2.65
SDCCAG3-201ENST00000298537 VSIG10Q8N0Z9 540 aa31.6■■■□□ 2.65
SDCCAG3-201ENST00000298537 JCADQ9P266 1359 aa31.6■■■□□ 2.65
SDCCAG3-201ENST00000298537 NWD2Q9ULI1 1742 aa31.6■■■□□ 2.65
SDCCAG3-201ENST00000298537 NUP188Q5SRE5 1749 aa31.6■■■□□ 2.65
SDCCAG3-201ENST00000298537 CASP7P55210 303 aa31.59■■■□□ 2.65
SDCCAG3-201ENST00000298537 SIL1Q9H173 461 aa31.59■■■□□ 2.65
SDCCAG3-201ENST00000298537 BARGINQ6ZT62 677 aa31.58■■■□□ 2.65
SDCCAG3-201ENST00000298537 ARXQ96QS3 562 aa31.58■■■□□ 2.65
SDCCAG3-201ENST00000298537 STAP2Q9UGK3 403 aa31.58■■■□□ 2.65
SDCCAG3-201ENST00000298537 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.58■■■□□ 2.65
SDCCAG3-201ENST00000298537 CYP19A1P11511 503 aaPredicted RBP31.57■■■□□ 2.64
SDCCAG3-201ENST00000298537 MAP4K4O95819 1239 aaPredicted RBP31.55■■■□□ 2.64
SDCCAG3-201ENST00000298537 HDAC5Q9UQL6 1122 aa31.55■■■□□ 2.64
SDCCAG3-201ENST00000298537 ZBTB1Q9Y2K1 713 aa31.55■■■□□ 2.64
SDCCAG3-201ENST00000298537 KCNQ2O43526 872 aa31.55■■■□□ 2.64
SDCCAG3-201ENST00000298537 SASH1O94885 1247 aa31.55■■■□□ 2.64
SDCCAG3-201ENST00000298537 STARD3NLO95772 234 aa31.55■■■□□ 2.64
SDCCAG3-201ENST00000298537 CERKQ8TCT0 537 aa31.54■■■□□ 2.64
SDCCAG3-201ENST00000298537 TEX13AQ9BXU3 409 aaPredicted RBP31.54■■■□□ 2.64
SDCCAG3-201ENST00000298537 RBM25P49756 843 aaKnown RBP31.53■■■□□ 2.64
SDCCAG3-201ENST00000298537 DAXXQ9UER7 740 aaPredicted RBP31.53■■■□□ 2.64
SDCCAG3-201ENST00000298537 PI4K2BQ8TCG2 481 aa31.53■■■□□ 2.64
SDCCAG3-201ENST00000298537 CWC25Q9NXE8 425 aaPredicted RBP31.53■■■□□ 2.64
SDCCAG3-201ENST00000298537 TUBGCP6Q96RT7 1819 aa31.52■■■□□ 2.64
SDCCAG3-201ENST00000298537 H7C1W4 665 aa31.52■■■□□ 2.64
SDCCAG3-201ENST00000298537 HSP90AB4PQ58FF6 505 aa31.52■■■□□ 2.64
SDCCAG3-201ENST00000298537 RILPL2Q969X0 211 aa31.52■■■□□ 2.64
SDCCAG3-201ENST00000298537 TRIM6-TRIM34B2RNG4 842 aa31.52■■■□□ 2.64
SDCCAG3-201ENST00000298537 TBC1D2Q9BYX2 928 aa31.52■■■□□ 2.64
SDCCAG3-201ENST00000298537 KIF2CQ99661 725 aa31.51■■■□□ 2.63
SDCCAG3-201ENST00000298537 RFX5P48382 616 aaPredicted RBP31.5■■■□□ 2.63
SDCCAG3-201ENST00000298537 HLFQ16534 295 aa31.5■■■□□ 2.63
SDCCAG3-201ENST00000298537 VPS72Q15906 364 aa31.5■■■□□ 2.63
SDCCAG3-201ENST00000298537 RABL6Q3YEC7 729 aaPredicted RBP31.5■■■□□ 2.63
SDCCAG3-201ENST00000298537 TJP1Q07157 1748 aa31.5■■■□□ 2.63
SDCCAG3-201ENST00000298537 FOXO4P98177 505 aa31.49■■■□□ 2.63
SDCCAG3-201ENST00000298537 LMBR1LQ6UX01 489 aa31.49■■■□□ 2.63
SDCCAG3-201ENST00000298537 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
SDCCAG3-201ENST00000298537 FNBP4Q8N3X1 1017 aaPredicted RBP31.48■■■□□ 2.63
SDCCAG3-201ENST00000298537 PTPN12Q05209 780 aaKnown RBP31.48■■■□□ 2.63
SDCCAG3-201ENST00000298537 G3BP1Q13283 466 aaKnown RBP eCLIP31.48■■■□□ 2.63
SDCCAG3-201ENST00000298537 HSPA1LP34931 641 aa31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 TCIRG1Q13488 830 aa31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 PTF1AQ7RTS3 328 aa31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 ISCA1Q9BUE6 129 aa31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 CLASRPQ8N2M8 674 aaKnown RBP31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 EAF2Q96CJ1 260 aaPredicted RBP31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 TLR7Q9NYK1 1049 aaKnown RBP31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 USP21Q9UK80 565 aa31.47■■■□□ 2.63
SDCCAG3-201ENST00000298537 CCDC191Q8NCU4 936 aa31.46■■■□□ 2.63
SDCCAG3-201ENST00000298537 KIF6Q6ZMV9 814 aa31.46■■■□□ 2.63
SDCCAG3-201ENST00000298537 AACSQ86V21 672 aa31.46■■■□□ 2.63
SDCCAG3-201ENST00000298537 CHMP3Q9Y3E7 222 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms