RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 C9orf84Q5VXU9 1444 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 CETN1Q12798 172 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 MICALCLQ6ZW33 695 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 ANO10Q9NW15 660 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 FEZ2Q9UHY8 353 aaPredicted RBP13.87□□□□□ -0.19
PCF11-201ENST00000298281 CTAGE5O15320 804 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 CCDC117Q8IWD4 279 aaPredicted RBP13.87□□□□□ -0.19
PCF11-201ENST00000298281 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 CKAP2LQ8IYA6 745 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 TCHPQ9BT92 498 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 ABCF2Q9UG63 623 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 NOC2LQ9Y3T9 749 aaKnown RBP13.87□□□□□ -0.19
PCF11-201ENST00000298281 PRC1O43663 620 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
PCF11-201ENST00000298281 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 DDX46Q7L014 1031 aaKnown RBP13.87□□□□□ -0.19
PCF11-201ENST00000298281 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
PCF11-201ENST00000298281 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
PCF11-201ENST00000298281 NFE2L2Q16236 605 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 FILIP1Q7Z7B0 1213 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 TMEM266Q2M3C6 531 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 MMRN2Q9H8L6 949 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 DPH6Q7L8W6 267 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 IQCA1Q86XH1 822 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 CTCFLQ8NI51 663 aaPredicted RBP13.86□□□□□ -0.19
PCF11-201ENST00000298281 IQCGQ9H095 443 aaKnown RBP13.86□□□□□ -0.19
PCF11-201ENST00000298281 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
PCF11-201ENST00000298281 ERBINQ96RT1 1412 aa13.86□□□□□ -0.19
PCF11-201ENST00000298281 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 CACYBPQ9HB71 228 aaKnown RBP13.85□□□□□ -0.19
PCF11-201ENST00000298281 CLEC11AQ9Y240 323 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 CLGNO14967 610 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 TDRD12Q587J7 1177 aaKnown RBP13.85□□□□□ -0.19
PCF11-201ENST00000298281 EFCAB5A4FU69 1503 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 ATP2C2O75185 946 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 KIF3CO14782 793 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 NLRP5P59047 1200 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 PYM1Q9BRP8 204 aaKnown RBP13.85□□□□□ -0.19
PCF11-201ENST00000298281 BIN2Q9UBW5 565 aaPredicted RBP13.85□□□□□ -0.19
PCF11-201ENST00000298281 BCAR3O75815 825 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 CASTP20810 708 aaKnown RBP13.85□□□□□ -0.19
PCF11-201ENST00000298281 SPECC1LQ69YQ0 1117 aa13.85□□□□□ -0.19
PCF11-201ENST00000298281 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
PCF11-201ENST00000298281 ATP6V1E1P36543 226 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 MAP3K12Q12852 859 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 NAPBQ9H115 298 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 ZPR1O75312 459 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 CCDC14Q49A88 953 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 ABCC11Q96J66 1382 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 USO1O60763 962 aaKnown RBP13.84□□□□□ -0.19
PCF11-201ENST00000298281 MCM4P33991 863 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 CCT6BQ92526 530 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 MINDY4BA8MYZ0 360 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 GEN1Q17RS7 908 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 TMX1Q9H3N1 280 aa13.84□□□□□ -0.19
PCF11-201ENST00000298281 TERF1P54274 439 aa13.83□□□□□ -0.19
PCF11-201ENST00000298281 CRCPO75575 148 aa13.83□□□□□ -0.19
PCF11-201ENST00000298281 KIF18AQ8NI77 898 aa13.83□□□□□ -0.19
PCF11-201ENST00000298281 SRRTQ9BXP5 876 aaKnown RBP13.83□□□□□ -0.19
PCF11-201ENST00000298281 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
PCF11-201ENST00000298281 KMT5BQ4FZB7 885 aa13.83□□□□□ -0.2
PCF11-201ENST00000298281 BANK1Q8NDB2 785 aa13.83□□□□□ -0.2
PCF11-201ENST00000298281 GOLGA6L9A6NEM1 432 aa13.83□□□□□ -0.2
PCF11-201ENST00000298281 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
PCF11-201ENST00000298281 PROCA1Q8NCQ7 364 aaPredicted RBP13.83□□□□□ -0.2
PCF11-201ENST00000298281 PTPN14Q15678 1187 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 TCERG1LQ5VWI1 586 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 CCDC12Q8WUD4 166 aaPredicted RBP13.82□□□□□ -0.2
PCF11-201ENST00000298281 GAS8O95995 478 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 NEMFO60524 1076 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 ALDH1L2Q3SY69 923 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 ESPNB1AK53 854 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 CPLX3Q8WVH0 158 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
PCF11-201ENST00000298281 ERCC3P19447 782 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 STXBP4Q6ZWJ1 553 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 NAA15Q9BXJ9 866 aaKnown RBP13.81□□□□□ -0.2
PCF11-201ENST00000298281 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 PRKCSHP14314 528 aaPredicted RBP13.81□□□□□ -0.2
PCF11-201ENST00000298281 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
PCF11-201ENST00000298281 FAM107BQ9H098 131 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 CCDC183Q5T5S1 534 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 SEPT8Q92599 483 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 NUP88Q99567 741 aaPredicted RBP13.81□□□□□ -0.2
PCF11-201ENST00000298281 A0A087WZG4 1122 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 AMPD3Q01432 767 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 CCDC82Q8N4S0 544 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 OPA1O60313 960 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 MX1P20591 662 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 NCBP1Q09161 790 aaKnown RBP13.81□□□□□ -0.2
PCF11-201ENST00000298281 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 TXNDC16Q9P2K2 825 aa13.81□□□□□ -0.2
PCF11-201ENST00000298281 IL1RAPL2Q9NP60 686 aa13.8□□□□□ -0.2
PCF11-201ENST00000298281 TMPOP42166 694 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms