RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 ANAPC15P60006 121 aa16.46■□□□□ 0.22
COL1A2-201ENST00000297268 GNG11P61952 73 aa16.46■□□□□ 0.22
COL1A2-201ENST00000297268 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.22
COL1A2-201ENST00000297268 FKBP15Q5T1M5 1219 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 NEK1Q96PY6 1258 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 MEIS3Q99687 375 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 YEATS4O95619 227 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 ZRSR2Q15696 482 aaKnown RBP16.45■□□□□ 0.22
COL1A2-201ENST00000297268 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
COL1A2-201ENST00000297268 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
COL1A2-201ENST00000297268 ZNF213O14771 459 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
COL1A2-201ENST00000297268 ZSCAN16Q9H4T2 348 aaPredicted RBP16.44■□□□□ 0.22
COL1A2-201ENST00000297268 F13A1P00488 732 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 CCDC82Q8N4S0 544 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
COL1A2-201ENST00000297268 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 CCDC12Q8WUD4 166 aaPredicted RBP16.44■□□□□ 0.22
COL1A2-201ENST00000297268 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 PPFIA3O75145 1194 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 FAM107BQ9H098 131 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 KIF14Q15058 1648 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 IBSPP21815 317 aaPredicted RBP16.44■□□□□ 0.22
COL1A2-201ENST00000297268 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 HMG20BQ9P0W2 317 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
COL1A2-201ENST00000297268 DNM1Q05193 864 aaKnown RBP16.43■□□□□ 0.22
COL1A2-201ENST00000297268 ZGPATQ8N5A5 531 aaKnown RBP16.43■□□□□ 0.22
COL1A2-201ENST00000297268 DACT1Q9NYF0 836 aa16.43■□□□□ 0.22
COL1A2-201ENST00000297268 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
COL1A2-201ENST00000297268 SLC12A7Q9Y666 1083 aa16.43■□□□□ 0.22
COL1A2-201ENST00000297268 ANKRD62A6NC57 917 aa16.43■□□□□ 0.22
COL1A2-201ENST00000297268 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
COL1A2-201ENST00000297268 NAPBQ9H115 298 aa16.43■□□□□ 0.22
COL1A2-201ENST00000297268 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
COL1A2-201ENST00000297268 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
COL1A2-201ENST00000297268 SSRP1Q08945 709 aaKnown RBP16.42■□□□□ 0.22
COL1A2-201ENST00000297268 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 DNAJC25Q9H1X3 360 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL1A2-201ENST00000297268 ANKRD36BQ8N2N9 1353 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 PAFAH1B1P43034 410 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
COL1A2-201ENST00000297268 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 CACNA2D4Q7Z3S7 1137 aa16.42■□□□□ 0.22
COL1A2-201ENST00000297268 USO1O60763 962 aaKnown RBP16.42■□□□□ 0.22
COL1A2-201ENST00000297268 RNF187Q5TA31 235 aaPredicted RBP16.42■□□□□ 0.22
COL1A2-201ENST00000297268 NOS1P29475 1434 aa16.41■□□□□ 0.22
COL1A2-201ENST00000297268 GTPBP4Q9BZE4 634 aaKnown RBP16.41■□□□□ 0.22
COL1A2-201ENST00000297268 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
COL1A2-201ENST00000297268 DNA2P51530 1060 aa16.41■□□□□ 0.22
COL1A2-201ENST00000297268 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
COL1A2-201ENST00000297268 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
COL1A2-201ENST00000297268 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL1A2-201ENST00000297268 V9GYY5 206 aaPredicted RBP16.41■□□□□ 0.22
COL1A2-201ENST00000297268 MINDY4BA8MYZ0 360 aa16.41■□□□□ 0.22
COL1A2-201ENST00000297268 MICALCLQ6ZW33 695 aa16.41■□□□□ 0.22
COL1A2-201ENST00000297268 ZFP91Q96JP5 570 aaPredicted RBP16.41■□□□□ 0.22
COL1A2-201ENST00000297268 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
COL1A2-201ENST00000297268 UBASH3AP57075 661 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 CCDC102BQ68D86 513 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 MAP3K2Q9Y2U5 619 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 GOLIM4O00461 696 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 SLU7O95391 586 aaKnown RBP16.4■□□□□ 0.22
COL1A2-201ENST00000297268 TYRO3Q06418 890 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 THEMISQ8N1K5 641 aaPredicted RBP16.4■□□□□ 0.22
COL1A2-201ENST00000297268 DYDC1Q8WWB3 177 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 BRF1Q92994 677 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 HYPKQ9NX55 129 aa16.4■□□□□ 0.22
COL1A2-201ENST00000297268 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
COL1A2-201ENST00000297268 PIK3R4Q99570 1358 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 IFIT3O14879 490 aaKnown RBP16.39■□□□□ 0.21
COL1A2-201ENST00000297268 MPRIPQ6WCQ1 1025 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 CCDC113Q9H0I3 377 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 LIG1P18858 919 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 PTGS1P23219 599 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 CCDC178Q5BJE1 867 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 ANKRD18AQ8IVF6 992 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 RBM25P49756 843 aaKnown RBP16.39■□□□□ 0.21
COL1A2-201ENST00000297268 MAP2K1Q02750 393 aaPredicted RBP16.39■□□□□ 0.21
COL1A2-201ENST00000297268 AOPEPQ8N6M6 819 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 ARFGAP3Q9NP61 516 aa16.39■□□□□ 0.21
COL1A2-201ENST00000297268 KDM2BQ8NHM5 1336 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 RBSNQ9H1K0 784 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 INCENPQ9NQS7 918 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 PI4KAP2A4QPH2 592 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 WASLO00401 505 aaPredicted RBP16.38■□□□□ 0.21
COL1A2-201ENST00000297268 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 PI4KAP1Q8N8J0 262 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 IARSP41252 1262 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms