RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ZSWIM6Q9HCJ5 1215 aa22.94■■□□□ 1.26
TRA2A-201ENST00000297071 MTMR6Q9Y217 621 aa22.94■■□□□ 1.26
TRA2A-201ENST00000297071 ANKARQ7Z5J8 1434 aa22.94■■□□□ 1.26
TRA2A-201ENST00000297071 AMPHP49418 695 aa22.94■■□□□ 1.26
TRA2A-201ENST00000297071 DNTTIP2Q5QJE6 756 aaKnown RBP22.94■■□□□ 1.26
TRA2A-201ENST00000297071 UTP14CQ5TAP6 766 aaKnown RBP22.94■■□□□ 1.26
TRA2A-201ENST00000297071 DIAPH3Q9NSV4 1193 aa22.94■■□□□ 1.26
TRA2A-201ENST00000297071 CEMIPQ8WUJ3 1361 aa22.93■■□□□ 1.26
TRA2A-201ENST00000297071 NUTM1Q86Y26 1132 aa22.93■■□□□ 1.26
TRA2A-201ENST00000297071 KIAA1524Q8TCG1 905 aa22.93■■□□□ 1.26
TRA2A-201ENST00000297071 IL1RAPL2Q9NP60 686 aa22.93■■□□□ 1.26
TRA2A-201ENST00000297071 RASEFQ8IZ41 740 aa22.92■■□□□ 1.26
TRA2A-201ENST00000297071 IL17REQ8NFR9 667 aa22.92■■□□□ 1.26
TRA2A-201ENST00000297071 ALDH8A1Q9H2A2 487 aaPredicted RBP22.92■■□□□ 1.26
TRA2A-201ENST00000297071 SNRKQ9NRH2 765 aa22.92■■□□□ 1.26
TRA2A-201ENST00000297071 HDAC5Q9UQL6 1122 aa22.92■■□□□ 1.26
TRA2A-201ENST00000297071 CCDC192P0DO97 292 aa22.91■■□□□ 1.26
TRA2A-201ENST00000297071 KIF3AQ9Y496 699 aa22.91■■□□□ 1.26
TRA2A-201ENST00000297071 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
TRA2A-201ENST00000297071 HDGFL1Q5TGJ6 251 aa22.9■■□□□ 1.26
TRA2A-201ENST00000297071 HIP1O00291 1037 aa22.89■■□□□ 1.26
TRA2A-201ENST00000297071 CYP46A1Q9Y6A2 500 aa22.89■■□□□ 1.26
TRA2A-201ENST00000297071 LTN1O94822 1766 aa22.89■■□□□ 1.26
TRA2A-201ENST00000297071 GJB2P29033 226 aa22.89■■□□□ 1.25
TRA2A-201ENST00000297071 ERC1Q8IUD2 1116 aa22.89■■□□□ 1.25
TRA2A-201ENST00000297071 PDRG1Q9NUG6 133 aa22.89■■□□□ 1.25
TRA2A-201ENST00000297071 SLIT1O75093 1534 aa22.89■■□□□ 1.25
TRA2A-201ENST00000297071 SRGAP3O43295 1099 aa22.88■■□□□ 1.25
TRA2A-201ENST00000297071 BEND3Q5T5X7 828 aa22.88■■□□□ 1.25
TRA2A-201ENST00000297071 TTC12Q9H892 705 aaPredicted RBP22.88■■□□□ 1.25
TRA2A-201ENST00000297071 CASTP20810 708 aaKnown RBP22.87■■□□□ 1.25
TRA2A-201ENST00000297071 PDCP20941 246 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 HOXC9P31274 260 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 SYCP1Q15431 976 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 ZNF710Q8N1W2 664 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 GPATCH3Q96I76 525 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 ESF1Q9H501 851 aaKnown RBP22.87■■□□□ 1.25
TRA2A-201ENST00000297071 ADAMTSL3P82987 1691 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 FIBPO43427 364 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 NECTIN1Q15223 517 aa22.87■■□□□ 1.25
TRA2A-201ENST00000297071 ARHGAP23Q9P227 1491 aa22.86■■□□□ 1.25
TRA2A-201ENST00000297071 CHAF1AQ13111 956 aaPredicted RBP22.86■■□□□ 1.25
TRA2A-201ENST00000297071 FAM200AQ8TCP9 573 aa22.86■■□□□ 1.25
TRA2A-201ENST00000297071 DNAAF4Q8WXU2 420 aa22.86■■□□□ 1.25
TRA2A-201ENST00000297071 MYH15Q9Y2K3 1946 aa22.86■■□□□ 1.25
TRA2A-201ENST00000297071 OVOS2A0A0G2JMS6 1433 aa22.85■■□□□ 1.25
TRA2A-201ENST00000297071 KRT85P78386 507 aa22.85■■□□□ 1.25
TRA2A-201ENST00000297071 FOXD4L6Q3SYB3 417 aaPredicted RBP22.85■■□□□ 1.25
TRA2A-201ENST00000297071 FOXD4L3Q6VB84 417 aaPredicted RBP22.85■■□□□ 1.25
TRA2A-201ENST00000297071 EVI5LQ96CN4 794 aa22.85■■□□□ 1.25
TRA2A-201ENST00000297071 ECHDC1Q9NTX5 307 aa22.85■■□□□ 1.25
TRA2A-201ENST00000297071 ALDH1L1O75891 902 aa22.85■■□□□ 1.25
TRA2A-201ENST00000297071 ANKRD1Q15327 319 aa22.85■■□□□ 1.25
TRA2A-201ENST00000297071 RBM43Q6ZSC3 357 aaKnown RBP22.85■■□□□ 1.25
TRA2A-201ENST00000297071 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.85■■□□□ 1.25
TRA2A-201ENST00000297071 CLASRPQ8N2M8 674 aaKnown RBP22.85■■□□□ 1.25
TRA2A-201ENST00000297071 CTIFO43310 598 aaKnown RBP22.84■■□□□ 1.25
TRA2A-201ENST00000297071 PSMA5P28066 241 aa22.84■■□□□ 1.25
TRA2A-201ENST00000297071 DNM1Q05193 864 aaKnown RBP22.84■■□□□ 1.25
TRA2A-201ENST00000297071 GIMAP6Q6P9H5 292 aa22.84■■□□□ 1.25
TRA2A-201ENST00000297071 CWC27Q6UX04 472 aaKnown RBP22.84■■□□□ 1.25
TRA2A-201ENST00000297071 ZNF830Q96NB3 372 aaPredicted RBP22.84■■□□□ 1.25
TRA2A-201ENST00000297071 LARGE1O95461 756 aa22.83■■□□□ 1.25
TRA2A-201ENST00000297071 ZKSCAN1P17029 563 aaPredicted RBP22.83■■□□□ 1.25
TRA2A-201ENST00000297071 MAP3K11Q16584 847 aa22.83■■□□□ 1.25
TRA2A-201ENST00000297071 CCDC83Q8IWF9 413 aa22.83■■□□□ 1.25
TRA2A-201ENST00000297071 KCNF1Q9H3M0 494 aa22.83■■□□□ 1.25
TRA2A-201ENST00000297071 PHAXQ9H814 394 aaKnown RBP22.83■■□□□ 1.25
TRA2A-201ENST00000297071 CAVIN2O95810 425 aa22.82■■□□□ 1.24
TRA2A-201ENST00000297071 EIF4A1P60842 406 aaKnown RBP22.82■■□□□ 1.24
TRA2A-201ENST00000297071 ANKRD7Q92527 254 aa22.82■■□□□ 1.24
TRA2A-201ENST00000297071 JAKMIP1Q96N16 626 aaKnown RBP22.82■■□□□ 1.24
TRA2A-201ENST00000297071 TBX22Q9Y458 520 aa22.82■■□□□ 1.24
TRA2A-201ENST00000297071 JCADQ9P266 1359 aa22.82■■□□□ 1.24
TRA2A-201ENST00000297071 DMTNQ08495 405 aa22.82■■□□□ 1.24
TRA2A-201ENST00000297071 GTPBP4Q9BZE4 634 aaKnown RBP22.82■■□□□ 1.24
TRA2A-201ENST00000297071 SCAND2PQ9GZW5 306 aaPredicted RBP22.82■■□□□ 1.24
TRA2A-201ENST00000297071 DDX19AQ9NUU7 478 aaKnown RBP22.82■■□□□ 1.24
TRA2A-201ENST00000297071 AP5Z1O43299 807 aa22.81■■□□□ 1.24
TRA2A-201ENST00000297071 ST3GAL1Q11201 340 aa22.81■■□□□ 1.24
TRA2A-201ENST00000297071 NGDNQ8NEJ9 315 aaKnown RBP22.81■■□□□ 1.24
TRA2A-201ENST00000297071 MAP4K1Q92918 833 aa22.81■■□□□ 1.24
TRA2A-201ENST00000297071 MAP4K4O95819 1239 aaPredicted RBP22.8■■□□□ 1.24
TRA2A-201ENST00000297071 NBPF7P0C2Y1 421 aaPredicted RBP22.8■■□□□ 1.24
TRA2A-201ENST00000297071 NCAPD2Q15021 1401 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 TSGA10IPQ3SY00 556 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 NUP62CLQ9H1M0 184 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 SPG7Q9UQ90 795 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
TRA2A-201ENST00000297071 ADCY9O60503 1353 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 GIGYF1O75420 1035 aaPredicted RBP22.8■■□□□ 1.24
TRA2A-201ENST00000297071 PTH1RQ03431 593 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 NECTIN2Q92692 538 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 BCL2L12Q9HB09 334 aa22.8■■□□□ 1.24
TRA2A-201ENST00000297071 NPHP3Q7Z494 1330 aa22.79■■□□□ 1.24
TRA2A-201ENST00000297071 ME3Q16798 604 aa22.79■■□□□ 1.24
TRA2A-201ENST00000297071 MRC1P22897 1456 aa22.79■■□□□ 1.24
TRA2A-201ENST00000297071 MLECQ14165 292 aa22.78■■□□□ 1.24
TRA2A-201ENST00000297071 PRPF40BQ6NWY9 871 aaKnown RBP22.78■■□□□ 1.24
TRA2A-201ENST00000297071 TTC6Q86TZ1 520 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms