RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 IGKV5-2P06315 115 aa24.31■■□□□ 1.48
CXCL16-201ENST00000293778 SNRPA1P09661 255 aaKnown RBP24.31■■□□□ 1.48
CXCL16-201ENST00000293778 NEXNQ0ZGT2 675 aa24.31■■□□□ 1.48
CXCL16-201ENST00000293778 SKOR2Q2VWA4 1001 aaPredicted RBP24.31■■□□□ 1.48
CXCL16-201ENST00000293778 BRINP3Q76B58 766 aa24.31■■□□□ 1.48
CXCL16-201ENST00000293778 KAZALD1Q96I82 304 aa24.31■■□□□ 1.48
CXCL16-201ENST00000293778 IL25Q9H293 177 aa24.31■■□□□ 1.48
CXCL16-201ENST00000293778 GLRX3O76003 335 aaKnown RBP24.31■■□□□ 1.48
CXCL16-201ENST00000293778 MCM2P49736 904 aa24.31■■□□□ 1.48
CXCL16-201ENST00000293778 IL17RAQ96F46 866 aa24.31■■□□□ 1.48
CXCL16-201ENST00000293778 BICC1Q9H694 974 aaKnown RBP24.31■■□□□ 1.48
CXCL16-201ENST00000293778 XIRP1Q702N8 1843 aaKnown RBP24.3■■□□□ 1.48
CXCL16-201ENST00000293778 FSD2A1L4K1 749 aa24.3■■□□□ 1.48
CXCL16-201ENST00000293778 COPS6Q7L5N1 327 aa24.3■■□□□ 1.48
CXCL16-201ENST00000293778 ZGPATQ8N5A5 531 aaKnown RBP24.3■■□□□ 1.48
CXCL16-201ENST00000293778 GOLGA6L22H0YM25 854 aa24.3■■□□□ 1.48
CXCL16-201ENST00000293778 FMNL2Q96PY5 1086 aa24.3■■□□□ 1.48
CXCL16-201ENST00000293778 BAG4O95429 457 aaKnown RBP24.29■■□□□ 1.48
CXCL16-201ENST00000293778 CYP2E1P05181 493 aaPredicted RBP24.29■■□□□ 1.48
CXCL16-201ENST00000293778 USP16Q9Y5T5 823 aa24.29■■□□□ 1.48
CXCL16-201ENST00000293778 NEURL1BA8MQ27 555 aa24.29■■□□□ 1.48
CXCL16-201ENST00000293778 SGSM2O43147 1006 aa24.29■■□□□ 1.48
CXCL16-201ENST00000293778 CABP4P57796 275 aa24.29■■□□□ 1.48
CXCL16-201ENST00000293778 GPATCH3Q96I76 525 aa24.29■■□□□ 1.48
CXCL16-201ENST00000293778 IFIT2P09913 472 aaKnown RBP24.28■■□□□ 1.48
CXCL16-201ENST00000293778 TMX3Q96JJ7 454 aa24.28■■□□□ 1.48
CXCL16-201ENST00000293778 METTL22Q9BUU2 404 aaPredicted RBP24.28■■□□□ 1.48
CXCL16-201ENST00000293778 ECHDC1Q9NTX5 307 aa24.28■■□□□ 1.48
CXCL16-201ENST00000293778 HSPA4P34932 840 aa24.27■■□□□ 1.48
CXCL16-201ENST00000293778 MYD88Q99836 296 aa24.27■■□□□ 1.48
CXCL16-201ENST00000293778 GCKRQ14397 625 aa24.26■■□□□ 1.47
CXCL16-201ENST00000293778 LRP10Q7Z4F1 713 aa24.26■■□□□ 1.47
CXCL16-201ENST00000293778 G3BP1Q13283 466 aaKnown RBP eCLIP24.26■■□□□ 1.47
CXCL16-201ENST00000293778 ANKRD13DQ6ZTN6 518 aa24.26■■□□□ 1.47
CXCL16-201ENST00000293778 RAD50Q92878 1312 aa24.26■■□□□ 1.47
CXCL16-201ENST00000293778 PKP1Q13835 747 aa24.25■■□□□ 1.47
CXCL16-201ENST00000293778 AACSQ86V21 672 aa24.25■■□□□ 1.47
CXCL16-201ENST00000293778 PRDM11Q9NQV5 511 aa24.25■■□□□ 1.47
CXCL16-201ENST00000293778 ARXQ96QS3 562 aa24.25■■□□□ 1.47
CXCL16-201ENST00000293778 WDR17Q8IZU2 1322 aa24.24■■□□□ 1.47
CXCL16-201ENST00000293778 PARP4Q9UKK3 1724 aaKnown RBP24.24■■□□□ 1.47
CXCL16-201ENST00000293778 SASH1O94885 1247 aa24.24■■□□□ 1.47
CXCL16-201ENST00000293778 PIP4K2AP48426 406 aaPredicted RBP24.23■■□□□ 1.47
CXCL16-201ENST00000293778 CWC27Q6UX04 472 aaKnown RBP24.23■■□□□ 1.47
CXCL16-201ENST00000293778 LSG1Q9H089 658 aaKnown RBP24.23■■□□□ 1.47
CXCL16-201ENST00000293778 KIAA1211Q6ZU35 1233 aa24.22■■□□□ 1.47
CXCL16-201ENST00000293778 UPF3BQ9BZI7 483 aaKnown RBP24.22■■□□□ 1.47
CXCL16-201ENST00000293778 DIAPH3Q9NSV4 1193 aa24.22■■□□□ 1.47
CXCL16-201ENST00000293778 XRCC6P12956 609 aaKnown RBP eCLIP24.22■■□□□ 1.47
CXCL16-201ENST00000293778 CUL4AQ13619 759 aa24.22■■□□□ 1.47
CXCL16-201ENST00000293778 TOM1L2Q6ZVM7 507 aa24.22■■□□□ 1.47
CXCL16-201ENST00000293778 RUFY2Q8WXA3 655 aa24.21■■□□□ 1.47
CXCL16-201ENST00000293778 SOS2Q07890 1332 aaPredicted RBP24.21■■□□□ 1.47
CXCL16-201ENST00000293778 PCDH11XQ9BZA7 1347 aa24.21■■□□□ 1.47
CXCL16-201ENST00000293778 PCDH11YQ9BZA8 1340 aa24.21■■□□□ 1.47
CXCL16-201ENST00000293778 MCTP1Q6DN14 999 aa24.2■■□□□ 1.46
CXCL16-201ENST00000293778 NOL8Q76FK4 1167 aaKnown RBP24.2■■□□□ 1.46
CXCL16-201ENST00000293778 ZCRB1Q8TBF4 217 aaKnown RBP24.2■■□□□ 1.46
CXCL16-201ENST00000293778 EAF2Q96CJ1 260 aaPredicted RBP24.2■■□□□ 1.46
CXCL16-201ENST00000293778 SIL1Q9H173 461 aa24.2■■□□□ 1.46
CXCL16-201ENST00000293778 SLAIN2Q9P270 581 aa24.2■■□□□ 1.46
CXCL16-201ENST00000293778 ISY1Q9ULR0 285 aaKnown RBP24.2■■□□□ 1.46
CXCL16-201ENST00000293778 ZDHHC9Q9Y397 364 aa24.2■■□□□ 1.46
CXCL16-201ENST00000293778 GLI3P10071 1580 aa24.2■■□□□ 1.46
CXCL16-201ENST00000293778 LAMB4A4D0S4 1761 aa24.19■■□□□ 1.46
CXCL16-201ENST00000293778 EPHA10Q5JZY3 1008 aa24.19■■□□□ 1.46
CXCL16-201ENST00000293778 EVI5LQ96CN4 794 aa24.19■■□□□ 1.46
CXCL16-201ENST00000293778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.19■■□□□ 1.46
CXCL16-201ENST00000293778 INTS4Q96HW7 963 aaKnown RBP24.19■■□□□ 1.46
CXCL16-201ENST00000293778 SNX14Q9Y5W7 946 aa24.19■■□□□ 1.46
CXCL16-201ENST00000293778 COL5A2P05997 1499 aaPredicted RBP24.18■■□□□ 1.46
CXCL16-201ENST00000293778 MRE11P49959 708 aa24.18■■□□□ 1.46
CXCL16-201ENST00000293778 KLHDC4Q8TBB5 520 aa24.18■■□□□ 1.46
CXCL16-201ENST00000293778 CCDC8Q9H0W5 538 aaPredicted RBP24.18■■□□□ 1.46
CXCL16-201ENST00000293778 RTN4Q9NQC3 1192 aaKnown RBP24.18■■□□□ 1.46
CXCL16-201ENST00000293778 KLHL40Q2TBA0 621 aa24.17■■□□□ 1.46
CXCL16-201ENST00000293778 DDX49Q9Y6V7 483 aaKnown RBP24.17■■□□□ 1.46
CXCL16-201ENST00000293778 ARFGEF2Q9Y6D5 1785 aa24.17■■□□□ 1.46
CXCL16-201ENST00000293778 PLBD2Q8NHP8 589 aa24.16■■□□□ 1.46
CXCL16-201ENST00000293778 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
CXCL16-201ENST00000293778 AFDNP55196 1824 aaKnown RBP24.16■■□□□ 1.46
CXCL16-201ENST00000293778 JARID2Q92833 1246 aaPredicted RBP24.15■■□□□ 1.46
CXCL16-201ENST00000293778 ERBB4Q15303 1308 aa24.15■■□□□ 1.46
CXCL16-201ENST00000293778 ERVV-2B6SEH9 535 aa24.15■■□□□ 1.46
CXCL16-201ENST00000293778 UBE3BQ7Z3V4 1068 aa24.15■■□□□ 1.46
CXCL16-201ENST00000293778 TLR7Q9NYK1 1049 aaKnown RBP24.15■■□□□ 1.46
CXCL16-201ENST00000293778 ATP5J2-PTCD1G3V325 749 aa24.14■■□□□ 1.46
CXCL16-201ENST00000293778 PTCD1O75127 700 aaKnown RBP24.14■■□□□ 1.46
CXCL16-201ENST00000293778 RASEFQ8IZ41 740 aa24.14■■□□□ 1.46
CXCL16-201ENST00000293778 GRPEL1Q9HAV7 217 aa24.14■■□□□ 1.46
CXCL16-201ENST00000293778 COPRSQ9NQ92 184 aa24.14■■□□□ 1.46
CXCL16-201ENST00000293778 COL15A1P39059 1388 aa24.14■■□□□ 1.45
CXCL16-201ENST00000293778 LMBRD1Q9NUN5 540 aa24.14■■□□□ 1.45
CXCL16-201ENST00000293778 ZNF335Q9H4Z2 1342 aaPredicted RBP24.14■■□□□ 1.45
CXCL16-201ENST00000293778 IL2RBP14784 551 aa24.13■■□□□ 1.45
CXCL16-201ENST00000293778 A0A087WZG4 1122 aa24.12■■□□□ 1.45
CXCL16-201ENST00000293778 HIP1O00291 1037 aa24.12■■□□□ 1.45
CXCL16-201ENST00000293778 RABL6Q3YEC7 729 aaPredicted RBP24.12■■□□□ 1.45
CXCL16-201ENST00000293778 CARD10Q9BWT7 1032 aa24.12■■□□□ 1.45
CXCL16-201ENST00000293778 NBPF26B4DH59 902 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms