RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 UNC5CLQ8IV45 518 aa23.35■■□□□ 1.33
VBP1-201ENST00000286428 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
VBP1-201ENST00000286428 NWD2Q9ULI1 1742 aa23.34■■□□□ 1.33
VBP1-201ENST00000286428 COL15A1P39059 1388 aa23.34■■□□□ 1.33
VBP1-201ENST00000286428 NBPF26B4DH59 902 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 GSPT1P15170 499 aaKnown RBP23.33■■□□□ 1.33
VBP1-201ENST00000286428 MX1P20591 662 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 OS9Q13438 667 aaPredicted RBP23.33■■□□□ 1.33
VBP1-201ENST00000286428 NBPF14Q5TI25 921 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 NBPF10Q6P3W6 841 aaKnown RBP23.33■■□□□ 1.33
VBP1-201ENST00000286428 NBPF15Q8N660 670 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 RHPN1Q8TCX5 695 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 STAP2Q9UGK3 403 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 ASAP1Q9ULH1 1129 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.33
VBP1-201ENST00000286428 GLI3P10071 1580 aa23.32■■□□□ 1.32
VBP1-201ENST00000286428 A1BGP04217 495 aa23.32■■□□□ 1.32
VBP1-201ENST00000286428 RBM42Q9BTD8 480 aaKnown RBP23.32■■□□□ 1.32
VBP1-201ENST00000286428 NRAPQ86VF7 1730 aa23.32■■□□□ 1.32
VBP1-201ENST00000286428 TBC1D9Q6ZT07 1266 aa23.31■■□□□ 1.32
VBP1-201ENST00000286428 SUCLG2Q96I99 432 aa23.31■■□□□ 1.32
VBP1-201ENST00000286428 NGLY1Q96IV0 654 aa23.31■■□□□ 1.32
VBP1-201ENST00000286428 BCL11AQ9H165 835 aa23.31■■□□□ 1.32
VBP1-201ENST00000286428 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
VBP1-201ENST00000286428 CLASRPQ8N2M8 674 aaKnown RBP23.3■■□□□ 1.32
VBP1-201ENST00000286428 SYTL4Q96C24 671 aaPredicted RBP23.3■■□□□ 1.32
VBP1-201ENST00000286428 PIP4K2AP48426 406 aaPredicted RBP23.29■■□□□ 1.32
VBP1-201ENST00000286428 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.32
VBP1-201ENST00000286428 KIF6Q6ZMV9 814 aa23.29■■□□□ 1.32
VBP1-201ENST00000286428 CCDC191Q8NCU4 936 aa23.29■■□□□ 1.32
VBP1-201ENST00000286428 BICC1Q9H694 974 aaKnown RBP23.29■■□□□ 1.32
VBP1-201ENST00000286428 TOGARAM1Q9Y4F4 1720 aa23.29■■□□□ 1.32
VBP1-201ENST00000286428 SALL3Q9BXA9 1300 aa23.29■■□□□ 1.32
VBP1-201ENST00000286428 A0A087WZG4 1122 aa23.28■■□□□ 1.32
VBP1-201ENST00000286428 VPS72Q15906 364 aa23.28■■□□□ 1.32
VBP1-201ENST00000286428 OTUD7AQ8TE49 926 aaPredicted RBP23.28■■□□□ 1.32
VBP1-201ENST00000286428 CWC25Q9NXE8 425 aaPredicted RBP23.28■■□□□ 1.32
VBP1-201ENST00000286428 SDSP20132 328 aa23.28■■□□□ 1.32
VBP1-201ENST00000286428 RBM25P49756 843 aaKnown RBP23.28■■□□□ 1.32
VBP1-201ENST00000286428 WNK3Q9BYP7 1800 aa23.28■■□□□ 1.32
VBP1-201ENST00000286428 PRIM1P49642 420 aaKnown RBP23.27■■□□□ 1.32
VBP1-201ENST00000286428 DNAJC10Q8IXB1 793 aa23.27■■□□□ 1.32
VBP1-201ENST00000286428 GPATCH3Q96I76 525 aa23.27■■□□□ 1.32
VBP1-201ENST00000286428 CERKQ8TCT0 537 aa23.26■■□□□ 1.31
VBP1-201ENST00000286428 HSP90AB3PQ58FF7 597 aa23.25■■□□□ 1.31
VBP1-201ENST00000286428 FNBP4Q8N3X1 1017 aaPredicted RBP23.25■■□□□ 1.31
VBP1-201ENST00000286428 KAZALD1Q96I82 304 aa23.25■■□□□ 1.31
VBP1-201ENST00000286428 C8orf37Q96NL8 207 aa23.25■■□□□ 1.31
VBP1-201ENST00000286428 TTC41PQ6P2S7 1318 aa23.25■■□□□ 1.31
VBP1-201ENST00000286428 MYT1Q01538 1121 aa23.25■■□□□ 1.31
VBP1-201ENST00000286428 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
VBP1-201ENST00000286428 IL1RAPL2Q9NP60 686 aa23.25■■□□□ 1.31
VBP1-201ENST00000286428 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
VBP1-201ENST00000286428 H7C1W4 665 aa23.24■■□□□ 1.31
VBP1-201ENST00000286428 ERC2O15083 957 aa23.24■■□□□ 1.31
VBP1-201ENST00000286428 REC8O95072 547 aa23.24■■□□□ 1.31
VBP1-201ENST00000286428 TRIM28Q13263 835 aaKnown RBP23.24■■□□□ 1.31
VBP1-201ENST00000286428 RABL6Q3YEC7 729 aaPredicted RBP23.24■■□□□ 1.31
VBP1-201ENST00000286428 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
VBP1-201ENST00000286428 UBE3BQ7Z3V4 1068 aa23.23■■□□□ 1.31
VBP1-201ENST00000286428 ANP32EQ9BTT0 268 aa23.23■■□□□ 1.31
VBP1-201ENST00000286428 TCIRG1Q13488 830 aa23.22■■□□□ 1.31
VBP1-201ENST00000286428 ITGB4P16144 1822 aa23.22■■□□□ 1.31
VBP1-201ENST00000286428 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
VBP1-201ENST00000286428 MARCH10Q8NA82 808 aaPredicted RBP23.22■■□□□ 1.31
VBP1-201ENST00000286428 ZBTB3Q9H5J0 574 aa23.22■■□□□ 1.31
VBP1-201ENST00000286428 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
VBP1-201ENST00000286428 ARFGEF2Q9Y6D5 1785 aa23.22■■□□□ 1.31
VBP1-201ENST00000286428 USP42Q9H9J4 1324 aaKnown RBP23.21■■□□□ 1.31
VBP1-201ENST00000286428 TRIM6-TRIM34B2RNG4 842 aa23.21■■□□□ 1.31
VBP1-201ENST00000286428 IFIT2P09913 472 aaKnown RBP23.21■■□□□ 1.31
VBP1-201ENST00000286428 GLRX3O76003 335 aaKnown RBP23.2■■□□□ 1.3
VBP1-201ENST00000286428 IL6STP40189 918 aaPredicted RBP23.2■■□□□ 1.3
VBP1-201ENST00000286428 ISCA1Q9BUE6 129 aa23.2■■□□□ 1.3
VBP1-201ENST00000286428 MAP3K15Q6ZN16 1313 aa23.2■■□□□ 1.3
VBP1-201ENST00000286428 CASP7P55210 303 aa23.19■■□□□ 1.3
VBP1-201ENST00000286428 ZNF330Q9Y3S2 320 aaPredicted RBP23.19■■□□□ 1.3
VBP1-201ENST00000286428 BCL9LQ86UU0 1499 aa23.18■■□□□ 1.3
VBP1-201ENST00000286428 ERVV-1B6SEH8 477 aa23.18■■□□□ 1.3
VBP1-201ENST00000286428 GIGYF2Q6Y7W6 1299 aaKnown RBP23.18■■□□□ 1.3
VBP1-201ENST00000286428 NUTM1Q86Y26 1132 aa23.18■■□□□ 1.3
VBP1-201ENST00000286428 CNTROBQ8N137 903 aa23.18■■□□□ 1.3
VBP1-201ENST00000286428 USP21Q9UK80 565 aa23.18■■□□□ 1.3
VBP1-201ENST00000286428 RILPL2Q969X0 211 aa23.17■■□□□ 1.3
VBP1-201ENST00000286428 PA2G4Q9UQ80 394 aaKnown RBP23.17■■□□□ 1.3
VBP1-201ENST00000286428 EPB41L2O43491 1005 aaKnown RBP23.16■■□□□ 1.3
VBP1-201ENST00000286428 FAM98CQ17RN3 349 aaKnown RBP23.16■■□□□ 1.3
VBP1-201ENST00000286428 ECHDC1Q9NTX5 307 aa23.16■■□□□ 1.3
VBP1-201ENST00000286428 ARXQ96QS3 562 aa23.16■■□□□ 1.3
VBP1-201ENST00000286428 A0A0G2JS52 829 aa23.15■■□□□ 1.3
VBP1-201ENST00000286428 ATP6V1AP38606 617 aa23.15■■□□□ 1.3
VBP1-201ENST00000286428 EPHA10Q5JZY3 1008 aa23.15■■□□□ 1.3
VBP1-201ENST00000286428 MEX3CQ5U5Q3 659 aaKnown RBP23.15■■□□□ 1.3
VBP1-201ENST00000286428 AACSQ86V21 672 aa23.14■■□□□ 1.29
VBP1-201ENST00000286428 ACSBG1Q96GR2 724 aa23.14■■□□□ 1.29
VBP1-201ENST00000286428 SLC4A9Q96Q91 983 aa23.14■■□□□ 1.29
VBP1-201ENST00000286428 AFDNP55196 1824 aaKnown RBP23.14■■□□□ 1.29
VBP1-201ENST00000286428 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
VBP1-201ENST00000286428 PCCAP05165 728 aaPredicted RBP23.13■■□□□ 1.29
VBP1-201ENST00000286428 SIK1P57059 783 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms