RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
USP43-201ENST00000285199 AK7Q96M32 723 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 NDUFB9Q9Y6M9 179 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 CCDC69A6NI79 296 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 ANAPC15P60006 121 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 TRIM34Q9BYJ4 488 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 CHPF2Q9P2E5 772 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 A0A087WWV3 80 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 MAP3K2Q9Y2U5 619 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 NUP160Q12769 1436 aa18.36■□□□□ 0.53
USP43-201ENST00000285199 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
USP43-201ENST00000285199 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
USP43-201ENST00000285199 LMAN1P49257 510 aa18.35■□□□□ 0.53
USP43-201ENST00000285199 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
USP43-201ENST00000285199 LRRFIP1Q32MZ4 808 aaKnown RBP18.35■□□□□ 0.53
USP43-201ENST00000285199 PLEKHO1Q53GL0 409 aaPredicted RBP18.35■□□□□ 0.53
USP43-201ENST00000285199 SYT10Q6XYQ8 523 aa18.35■□□□□ 0.53
USP43-201ENST00000285199 PPFIBP1Q86W92 1011 aa18.35■□□□□ 0.53
USP43-201ENST00000285199 MARCH6O60337 910 aa18.35■□□□□ 0.53
USP43-201ENST00000285199 TOP1P11387 765 aaKnown RBP18.35■□□□□ 0.53
USP43-201ENST00000285199 INTS4Q96HW7 963 aaKnown RBP18.35■□□□□ 0.53
USP43-201ENST00000285199 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
USP43-201ENST00000285199 UNC5CLQ8IV45 518 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 C8orf76Q96K31 380 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 SLC3A2P08195 630 aaKnown RBP18.34■□□□□ 0.53
USP43-201ENST00000285199 GNG11P61952 73 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 LARP1Q6PKG0 1096 aaKnown RBP18.34■□□□□ 0.53
USP43-201ENST00000285199 MYD88Q99836 296 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
USP43-201ENST00000285199 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 DHX16O60231 1041 aaKnown RBP18.34■□□□□ 0.53
USP43-201ENST00000285199 MARCKSP29966 332 aaPredicted RBP18.34■□□□□ 0.53
USP43-201ENST00000285199 CWF19L2Q2TBE0 894 aaKnown RBP18.34■□□□□ 0.53
USP43-201ENST00000285199 NEK1Q96PY6 1258 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 RUFY1Q96T51 708 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
USP43-201ENST00000285199 GOLIM4O00461 696 aa18.33■□□□□ 0.53
USP43-201ENST00000285199 KRT32Q14532 448 aa18.33■□□□□ 0.53
USP43-201ENST00000285199 MCM6Q14566 821 aa18.33■□□□□ 0.53
USP43-201ENST00000285199 NRBP1Q9UHY1 535 aa18.33■□□□□ 0.53
USP43-201ENST00000285199 SNX14Q9Y5W7 946 aa18.33■□□□□ 0.53
USP43-201ENST00000285199 ERICH2A1L162 156 aa18.33■□□□□ 0.52
USP43-201ENST00000285199 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
USP43-201ENST00000285199 STX1AQ16623 288 aa18.33■□□□□ 0.52
USP43-201ENST00000285199 CCDC70Q6NSX1 233 aa18.33■□□□□ 0.52
USP43-201ENST00000285199 NMIQ13287 307 aaPredicted RBP18.33■□□□□ 0.52
USP43-201ENST00000285199 KLHDC4Q8TBB5 520 aa18.33■□□□□ 0.52
USP43-201ENST00000285199 NSD2O96028 1365 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 ELF2Q15723 593 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 EVI5LQ96CN4 794 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 LIG1P18858 919 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 ARHGAP29Q52LW3 1261 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 TIGD1Q96MW7 591 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 RAD21O60216 631 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 PHACTR2O75167 634 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 CBX8Q9HC52 389 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
USP43-201ENST00000285199 GTPBP4Q9BZE4 634 aaKnown RBP18.31■□□□□ 0.52
USP43-201ENST00000285199 NPC1L1Q9UHC9 1359 aa18.31■□□□□ 0.52
USP43-201ENST00000285199 IDH1O75874 414 aaKnown RBP18.31■□□□□ 0.52
USP43-201ENST00000285199 TTC39AQ5SRH9 613 aa18.31■□□□□ 0.52
USP43-201ENST00000285199 Q6ZUG5 572 aa18.31■□□□□ 0.52
USP43-201ENST00000285199 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
USP43-201ENST00000285199 PTPRTO14522 1441 aa18.31■□□□□ 0.52
USP43-201ENST00000285199 SETQ01105 290 aaPredicted RBP18.31■□□□□ 0.52
USP43-201ENST00000285199 BMS1Q14692 1282 aaKnown RBP18.31■□□□□ 0.52
USP43-201ENST00000285199 CDC37L1Q7L3B6 337 aa18.31■□□□□ 0.52
USP43-201ENST00000285199 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
USP43-201ENST00000285199 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 VPS53Q5VIR6 699 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 TSPYL1Q9H0U9 437 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 ACEP12821 1306 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 CCP110O43303 1012 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 FILIP1LQ4L180 1135 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
USP43-201ENST00000285199 A0A1B0GVL5 298 aa18.29■□□□□ 0.52
USP43-201ENST00000285199 SLU7O95391 586 aaKnown RBP18.29■□□□□ 0.52
USP43-201ENST00000285199 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
USP43-201ENST00000285199 ACBD3Q9H3P7 528 aa18.29■□□□□ 0.52
USP43-201ENST00000285199 IFNKQ9P0W0 207 aa18.29■□□□□ 0.52
USP43-201ENST00000285199 SMTNL1A8MU46 457 aa18.29■□□□□ 0.52
USP43-201ENST00000285199 UBE3BQ7Z3V4 1068 aa18.29■□□□□ 0.52
USP43-201ENST00000285199 DNA2P51530 1060 aa18.28■□□□□ 0.52
USP43-201ENST00000285199 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
USP43-201ENST00000285199 NPHP3Q7Z494 1330 aa18.28■□□□□ 0.52
USP43-201ENST00000285199 NBPF7P0C2Y1 421 aaPredicted RBP18.28■□□□□ 0.52
USP43-201ENST00000285199 NAA30Q147X3 362 aaPredicted RBP18.28■□□□□ 0.52
USP43-201ENST00000285199 RASEFQ8IZ41 740 aa18.28■□□□□ 0.52
USP43-201ENST00000285199 ORC3Q9UBD5 711 aaPredicted RBP18.28■□□□□ 0.52
USP43-201ENST00000285199 GOLGA8BA8MQT2 603 aa18.28■□□□□ 0.52
USP43-201ENST00000285199 JAK2O60674 1132 aa18.28■□□□□ 0.52
USP43-201ENST00000285199 CASQ1P31415 396 aa18.28■□□□□ 0.52
USP43-201ENST00000285199 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
USP43-201ENST00000285199 TERF1P54274 439 aa18.27■□□□□ 0.52
USP43-201ENST00000285199 HSP90AB3PQ58FF7 597 aa18.27■□□□□ 0.52
USP43-201ENST00000285199 CCDC158Q5M9N0 1113 aa18.27■□□□□ 0.52
USP43-201ENST00000285199 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms