RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZBTB3Q9H5J0 574 aa21.99■■□□□ 1.11
CAPN1-201ENST00000279247 ANTXR1Q9H6X2 564 aa21.99■■□□□ 1.11
CAPN1-201ENST00000279247 ANO2Q9NQ90 1003 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 ERC2O15083 957 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 EPHA10Q5JZY3 1008 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 TTLL7Q6ZT98 887 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 C8orf37Q96NL8 207 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 RAB11FIP3O75154 756 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 GCKRQ14397 625 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 METTL22Q9BUU2 404 aaPredicted RBP21.98■■□□□ 1.11
CAPN1-201ENST00000279247 CHMP3Q9Y3E7 222 aa21.98■■□□□ 1.11
CAPN1-201ENST00000279247 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
CAPN1-201ENST00000279247 NBPF26B4DH59 902 aa21.97■■□□□ 1.11
CAPN1-201ENST00000279247 NBPF14Q5TI25 921 aa21.97■■□□□ 1.11
CAPN1-201ENST00000279247 NBPF10Q6P3W6 841 aaKnown RBP21.97■■□□□ 1.11
CAPN1-201ENST00000279247 NBPF15Q8N660 670 aa21.97■■□□□ 1.11
CAPN1-201ENST00000279247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.97■■□□□ 1.11
CAPN1-201ENST00000279247 TMOD3Q9NYL9 352 aa21.96■■□□□ 1.11
CAPN1-201ENST00000279247 REC8O95072 547 aa21.96■■□□□ 1.11
CAPN1-201ENST00000279247 CLASRPQ8N2M8 674 aaKnown RBP21.96■■□□□ 1.11
CAPN1-201ENST00000279247 A0A087WZG4 1122 aa21.96■■□□□ 1.11
CAPN1-201ENST00000279247 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
CAPN1-201ENST00000279247 AACSQ86V21 672 aa21.95■■□□□ 1.1
CAPN1-201ENST00000279247 CCDC8Q9H0W5 538 aaPredicted RBP21.95■■□□□ 1.1
CAPN1-201ENST00000279247 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.13e-6■■■□□ 16
CAPN1-201ENST00000279247 CERKQ8TCT0 537 aa21.95■■□□□ 1.1
CAPN1-201ENST00000279247 LRP10Q7Z4F1 713 aa21.94■■□□□ 1.1
CAPN1-201ENST00000279247 ADAMTS7Q9UKP4 1686 aa21.94■■□□□ 1.1
CAPN1-201ENST00000279247 AHDC1Q5TGY3 1603 aaPredicted RBP21.94■■□□□ 1.1
CAPN1-201ENST00000279247 IFIT2P09913 472 aaKnown RBP21.94■■□□□ 1.1
CAPN1-201ENST00000279247 NOL8Q76FK4 1167 aaKnown RBP21.94■■□□□ 1.1
CAPN1-201ENST00000279247 IL25Q9H293 177 aa21.94■■□□□ 1.1
CAPN1-201ENST00000279247 CHMLP26374 656 aa21.93■■□□□ 1.1
CAPN1-201ENST00000279247 HSP90AB4PQ58FF6 505 aa21.93■■□□□ 1.1
CAPN1-201ENST00000279247 ERVV-2B6SEH9 535 aa21.93■■□□□ 1.1
CAPN1-201ENST00000279247 ESYT1Q9BSJ8 1104 aa21.93■■□□□ 1.1
CAPN1-201ENST00000279247 STAP2Q9UGK3 403 aa21.93■■□□□ 1.1
CAPN1-201ENST00000279247 NGLY1Q96IV0 654 aa21.92■■□□□ 1.1
CAPN1-201ENST00000279247 PKD1L3Q7Z443 1732 aa21.92■■□□□ 1.1
CAPN1-201ENST00000279247 COL16A1Q07092 1604 aaPredicted RBP21.92■■□□□ 1.1
CAPN1-201ENST00000279247 N4BP2Q86UW6 1770 aaPredicted RBP21.91■■□□□ 1.1
CAPN1-201ENST00000279247 PI4K2BQ8TCG2 481 aa21.91■■□□□ 1.1
CAPN1-201ENST00000279247 K7ELQ4 463 aaPredicted RBP21.9■■□□□ 1.1
CAPN1-201ENST00000279247 HDAC5Q9UQL6 1122 aa21.9■■□□□ 1.1
CAPN1-201ENST00000279247 MTX1Q13505 466 aa21.9■■□□□ 1.1
CAPN1-201ENST00000279247 PIGBQ92521 554 aa21.9■■□□□ 1.1
CAPN1-201ENST00000279247 SNX21Q969T3 373 aa21.9■■□□□ 1.1
CAPN1-201ENST00000279247 SASH1O94885 1247 aa21.9■■□□□ 1.1
CAPN1-201ENST00000279247 HSPA1LP34931 641 aa21.9■■□□□ 1.1
CAPN1-201ENST00000279247 CWC27Q6UX04 472 aaKnown RBP21.9■■□□□ 1.1
CAPN1-201ENST00000279247 TLR7Q9NYK1 1049 aaKnown RBP21.9■■□□□ 1.1
CAPN1-201ENST00000279247 DNAJC10Q8IXB1 793 aa21.89■■□□□ 1.1
CAPN1-201ENST00000279247 CHMP5Q9NZZ3 219 aa21.89■■□□□ 1.1
CAPN1-201ENST00000279247 EP400Q96L91 3159 aa21.89■■□□□ 1.09
CAPN1-201ENST00000279247 PLBD2Q8NHP8 589 aa21.88■■□□□ 1.09
CAPN1-201ENST00000279247 CCDC85AQ96PX6 553 aaPredicted RBP21.88■■□□□ 1.09
CAPN1-201ENST00000279247 ABCC6O95255 1503 aa21.88■■□□□ 1.09
CAPN1-201ENST00000279247 MRC1P22897 1456 aa21.88■■□□□ 1.09
CAPN1-201ENST00000279247 RABEP1Q15276 862 aa21.88■■□□□ 1.09
CAPN1-201ENST00000279247 EAF2Q96CJ1 260 aaPredicted RBP21.88■■□□□ 1.09
CAPN1-201ENST00000279247 PALD1Q9ULE6 856 aa21.88■■□□□ 1.09
CAPN1-201ENST00000279247 NKX1-1Q15270 411 aaPredicted RBP21.87■■□□□ 1.09
CAPN1-201ENST00000279247 PARP4Q9UKK3 1724 aaKnown RBP21.87■■□□□ 1.09
CAPN1-201ENST00000279247 LMBR1LQ6UX01 489 aa21.86■■□□□ 1.09
CAPN1-201ENST00000279247 CNTROBQ8N137 903 aa21.86■■□□□ 1.09
CAPN1-201ENST00000279247 ACSBG1Q96GR2 724 aa21.86■■□□□ 1.09
CAPN1-201ENST00000279247 NEK4P51957 841 aa21.86■■□□□ 1.09
CAPN1-201ENST00000279247 BOLA2Q9H3K6 86 aa21.86■■□□□ 1.09
CAPN1-201ENST00000279247 UPF3BQ9BZI7 483 aaKnown RBP21.85■■□□□ 1.09
CAPN1-201ENST00000279247 ECHDC1Q9NTX5 307 aa21.85■■□□□ 1.09
CAPN1-201ENST00000279247 ERC1Q8IUD2 1116 aa21.85■■□□□ 1.09
CAPN1-201ENST00000279247 NDUFB9Q9Y6M9 179 aa21.85■■□□□ 1.09
CAPN1-201ENST00000279247 UTYO14607 1347 aa21.85■■□□□ 1.09
CAPN1-201ENST00000279247 EXOC5O00471 708 aa21.85■■□□□ 1.09
CAPN1-201ENST00000279247 FAM98CQ17RN3 349 aaKnown RBP21.85■■□□□ 1.09
CAPN1-201ENST00000279247 FAM182BQ5T319 152 aa21.84■■□□□ 1.09
CAPN1-201ENST00000279247 GLRX3O76003 335 aaKnown RBP21.84■■□□□ 1.09
CAPN1-201ENST00000279247 GPATCH3Q96I76 525 aa21.83■■□□□ 1.09
CAPN1-201ENST00000279247 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.08
CAPN1-201ENST00000279247 DIAPH3Q9NSV4 1193 aa21.83■■□□□ 1.08
CAPN1-201ENST00000279247 ATG3Q9NT62 314 aa21.83■■□□□ 1.08
CAPN1-201ENST00000279247 ST18O60284 1047 aa21.82■■□□□ 1.08
CAPN1-201ENST00000279247 EDC3Q96F86 508 aaKnown RBP21.82■■□□□ 1.08
CAPN1-201ENST00000279247 CWC25Q9NXE8 425 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-201ENST00000279247 SPATA31A1Q5TZJ5 1347 aa21.81■■□□□ 1.08
CAPN1-201ENST00000279247 GPTP24298 496 aa21.81■■□□□ 1.08
CAPN1-201ENST00000279247 PRIM1P49642 420 aaKnown RBP21.81■■□□□ 1.08
CAPN1-201ENST00000279247 TFCP2Q12800 502 aa21.81■■□□□ 1.08
CAPN1-201ENST00000279247 GZF1Q9H116 711 aaPredicted RBP21.81■■□□□ 1.08
CAPN1-201ENST00000279247 MCCP23508 829 aa21.81■■□□□ 1.08
CAPN1-201ENST00000279247 AOX1Q06278 1338 aa21.8■■□□□ 1.08
CAPN1-201ENST00000279247 ZNF594Q96JF6 807 aaPredicted RBP21.8■■□□□ 1.08
CAPN1-201ENST00000279247 PTPN12Q05209 780 aaKnown RBP21.8■■□□□ 1.08
CAPN1-201ENST00000279247 GSE1Q14687 1217 aa21.8■■□□□ 1.08
CAPN1-201ENST00000279247 AFDNP55196 1824 aaKnown RBP21.79■■□□□ 1.08
CAPN1-201ENST00000279247 AK9Q5TCS8 1911 aa21.79■■□□□ 1.08
CAPN1-201ENST00000279247 DDB1Q16531 1140 aa21.79■■□□□ 1.08
CAPN1-201ENST00000279247 COL14A1Q05707 1796 aaKnown RBP21.79■■□□□ 1.08
CAPN1-201ENST00000279247 LARP6Q9BRS8 491 aaKnown RBP21.79■■□□□ 1.08
CAPN1-201ENST00000279247 TTC41PQ6P2S7 1318 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms