RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
SLC13A3-201ENST00000279027 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
SLC13A3-201ENST00000279027 FAM227BQ96M60 508 aa14.24□□□□□ -0.13
SLC13A3-201ENST00000279027 DDX46Q7L014 1031 aaKnown RBP14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 LRRC2Q9BYS8 371 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 IBTKQ9P2D0 1353 aaPredicted RBP14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 AK2P54819 239 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 KLHL40Q2TBA0 621 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 ZSCAN23Q3MJ62 389 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 LINS1Q8NG48 757 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 DDX11Q96FC9 970 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 FBXW7Q969H0 707 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 SNRKQ9NRH2 765 aa14.23□□□□□ -0.13
SLC13A3-201ENST00000279027 ESPNB1AK53 854 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 H3BQV1 296 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 FKBP4Q02790 459 aaKnown RBP eCLIP14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 WASHC4Q2M389 1173 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 IFFO2Q5TF58 517 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 TECPR2O15040 1411 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 PRIM1P49642 420 aaKnown RBP14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 RNF20Q5VTR2 975 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 IL25Q9H293 177 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 NMIQ13287 307 aaPredicted RBP14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
SLC13A3-201ENST00000279027 FAM184AQ8NB25 1140 aa14.21□□□□□ -0.13
SLC13A3-201ENST00000279027 FMNL2Q96PY5 1086 aa14.21□□□□□ -0.13
SLC13A3-201ENST00000279027 DDX21Q9NR30 783 aaKnown RBP eCLIP14.21□□□□□ -0.13
SLC13A3-201ENST00000279027 WDR33Q9C0J8 1336 aaKnown RBP14.21□□□□□ -0.13
SLC13A3-201ENST00000279027 BLOC1S2Q6QNY1 142 aa14.21□□□□□ -0.13
SLC13A3-201ENST00000279027 LMBR1LQ6UX01 489 aa14.21□□□□□ -0.13
SLC13A3-201ENST00000279027 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
SLC13A3-201ENST00000279027 LARP1BQ659C4 914 aaKnown RBP14.21□□□□□ -0.14
SLC13A3-201ENST00000279027 SNRPA1P09661 255 aaKnown RBP14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 PTH1RQ03431 593 aa14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 LIMCH1Q9UPQ0 1083 aa14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 CNPY2Q9Y2B0 182 aa14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 RBM8AQ9Y5S9 174 aaKnown RBP14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 GPTP24298 496 aa14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 EAF2Q96CJ1 260 aaPredicted RBP14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 SNX14Q9Y5W7 946 aa14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 SGSM2O43147 1006 aa14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 DRC7Q8IY82 874 aa14.2□□□□□ -0.14
SLC13A3-201ENST00000279027 A1BGP04217 495 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 CCDC129Q6ZRS4 1044 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 ALDH1L1O75891 902 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 GJB2P29033 226 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 TFCP2Q12800 502 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 STK11IPQ8N1F8 1099 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 TFIP11Q9UBB9 837 aaKnown RBP14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 APPP05067 770 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 FAM173BQ6P4H8 233 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 EVI5LQ96CN4 794 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 LMBRD1Q9NUN5 540 aa14.19□□□□□ -0.14
SLC13A3-201ENST00000279027 GOLIM4O00461 696 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 MBD3O95983 291 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 OSBPL3Q9H4L5 887 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 TOMM22Q9NS69 142 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 GADD45BO75293 160 aaPredicted RBP14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 USP48Q86UV5 1035 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 SLC52A2Q9HAB3 445 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 NSFL1CQ9UNZ2 370 aaKnown RBP14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 ATP6V1DQ9Y5K8 247 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 KDRP35968 1356 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 TIMM10P62072 90 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 CAMK4Q16566 473 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 BICD2Q8TD16 824 aa14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 ZNF594Q96JF6 807 aaPredicted RBP14.18□□□□□ -0.14
SLC13A3-201ENST00000279027 RGS12O14924 1447 aa14.17□□□□□ -0.14
SLC13A3-201ENST00000279027 RAB11FIP4Q86YS3 637 aa14.17□□□□□ -0.14
SLC13A3-201ENST00000279027 PSMA5P28066 241 aa14.17□□□□□ -0.14
SLC13A3-201ENST00000279027 TSPY26PQ9H489 355 aa14.17□□□□□ -0.14
SLC13A3-201ENST00000279027 STX6O43752 255 aa14.17□□□□□ -0.14
SLC13A3-201ENST00000279027 ADCK5Q3MIX3 580 aa14.17□□□□□ -0.14
SLC13A3-201ENST00000279027 HSP90AB3PQ58FF7 597 aa14.17□□□□□ -0.14
SLC13A3-201ENST00000279027 RBSNQ9H1K0 784 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 DBNDD2Q9BQY9 259 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 PHF14O94880 888 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 GUCY1B3Q02153 619 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 CCDC173Q0VFZ6 552 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 CADPS2Q86UW7 1296 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 NPHP3Q7Z494 1330 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 DIP2AQ14689 1571 aa14.16□□□□□ -0.14
SLC13A3-201ENST00000279027 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 PI4K2BQ8TCG2 481 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 TMEM63CQ9P1W3 806 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 PHKG2P15735 406 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 ANAPC15P60006 121 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 GCKRQ14397 625 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 EPHA10Q5JZY3 1008 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 GPT2Q8TD30 523 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 HSPA4P34932 840 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 DNM1Q05193 864 aaKnown RBP14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 ZCRB1Q8TBF4 217 aaKnown RBP14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 SEC62Q99442 399 aaKnown RBP14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 STAP2Q9UGK3 403 aa14.15□□□□□ -0.14
SLC13A3-201ENST00000279027 ITSN1Q15811 1721 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms