RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 AFF2P51816 1311 aa14.4□□□□□ -0.1
LRTM1-201ENST00000273286 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
LRTM1-201ENST00000273286 CCDC144AA2RUR9 1427 aa14.39□□□□□ -0.11
LRTM1-201ENST00000273286 GPKOWQ92917 476 aaPredicted RBP eCLIP14.39□□□□□ -0.11
LRTM1-201ENST00000273286 CARD14Q9BXL6 1004 aa14.39□□□□□ -0.11
LRTM1-201ENST00000273286 SOS2Q07890 1332 aaPredicted RBP14.38□□□□□ -0.11
LRTM1-201ENST00000273286 ANKRD30BQ9BXX2 1392 aa14.38□□□□□ -0.11
LRTM1-201ENST00000273286 NR5A1Q13285 461 aa14.37□□□□□ -0.11
LRTM1-201ENST00000273286 CDC42BPGQ6DT37 1551 aa14.36□□□□□ -0.11
LRTM1-201ENST00000273286 NR3C2P08235 984 aa14.36□□□□□ -0.11
LRTM1-201ENST00000273286 NR6A1Q15406 480 aa14.36□□□□□ -0.11
LRTM1-201ENST00000273286 C8orf37Q96NL8 207 aa14.36□□□□□ -0.11
LRTM1-201ENST00000273286 FKBPLQ9UIM3 349 aa14.36□□□□□ -0.11
LRTM1-201ENST00000273286 NPHP3Q7Z494 1330 aa14.35□□□□□ -0.11
LRTM1-201ENST00000273286 GRM5P41594 1212 aa14.35□□□□□ -0.11
LRTM1-201ENST00000273286 RBM6P78332 1123 aaKnown RBP14.35□□□□□ -0.11
LRTM1-201ENST00000273286 NGLY1Q96IV0 654 aa14.35□□□□□ -0.11
LRTM1-201ENST00000273286 TECPR2O15040 1411 aa14.35□□□□□ -0.11
LRTM1-201ENST00000273286 FSHRP23945 695 aa14.34□□□□□ -0.11
LRTM1-201ENST00000273286 KLF16Q9BXK1 252 aaPredicted RBP14.34□□□□□ -0.11
LRTM1-201ENST00000273286 LRPPRCP42704 1394 aaKnown RBP14.34□□□□□ -0.11
LRTM1-201ENST00000273286 WFS1O76024 890 aa14.33□□□□□ -0.11
LRTM1-201ENST00000273286 ZIC2O95409 532 aaPredicted RBP14.33□□□□□ -0.11
LRTM1-201ENST00000273286 TRMT44Q8IYL2 757 aaKnown RBP14.33□□□□□ -0.11
LRTM1-201ENST00000273286 DDX17Q92841 729 aaKnown RBP14.33□□□□□ -0.11
LRTM1-201ENST00000273286 ORAI2Q96SN7 254 aa14.33□□□□□ -0.11
LRTM1-201ENST00000273286 ZFAND3Q9H8U3 227 aa14.33□□□□□ -0.11
LRTM1-201ENST00000273286 QTRT2Q9H974 415 aaKnown RBP14.33□□□□□ -0.11
LRTM1-201ENST00000273286 MAP4K5Q9Y4K4 846 aa14.33□□□□□ -0.11
LRTM1-201ENST00000273286 LCE2AQ5TA79 106 aaPredicted RBP14.32□□□□□ -0.12
LRTM1-201ENST00000273286 MRPL14Q6P1L8 145 aaKnown RBP14.32□□□□□ -0.12
LRTM1-201ENST00000273286 VASH1Q7L8A9 365 aaPredicted RBP14.32□□□□□ -0.12
LRTM1-201ENST00000273286 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 ABCC11Q96J66 1382 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 ERFEQ4G0M1 354 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 PDXDC2PQ6P474 469 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 ITPKCQ96DU7 683 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 ZFP42Q96MM3 310 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 MPHOSPH9Q99550 1183 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 ARHGAP9Q9BRR9 750 aa14.32□□□□□ -0.12
LRTM1-201ENST00000273286 COL22A1Q8NFW1 1626 aaPredicted RBP14.31□□□□□ -0.12
LRTM1-201ENST00000273286 RFC5P40937 340 aa14.31□□□□□ -0.12
LRTM1-201ENST00000273286 NFX1Q12986 1120 aaKnown RBP14.31□□□□□ -0.12
LRTM1-201ENST00000273286 PCMTD1Q96MG8 357 aaPredicted RBP14.31□□□□□ -0.12
LRTM1-201ENST00000273286 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
LRTM1-201ENST00000273286 RGS12O14924 1447 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 PIK3C2GO75747 1445 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 ADAMTS2O95450 1211 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 SCARF1Q14162 830 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 ESCO1Q5FWF5 840 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 KNDC1Q76NI1 1749 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 GOPCQ9HD26 462 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 IFT172Q9UG01 1749 aa14.3□□□□□ -0.12
LRTM1-201ENST00000273286 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
LRTM1-201ENST00000273286 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
LRTM1-201ENST00000273286 FNBP4Q8N3X1 1017 aaPredicted RBP14.29□□□□□ -0.12
LRTM1-201ENST00000273286 PURBQ96QR8 312 aaKnown RBP14.29□□□□□ -0.12
LRTM1-201ENST00000273286 TERTO14746 1132 aaKnown RBP14.28□□□□□ -0.12
LRTM1-201ENST00000273286 SIRT1Q96EB6 747 aa14.28□□□□□ -0.12
LRTM1-201ENST00000273286 HMX1Q9NP08 348 aaPredicted RBP14.28□□□□□ -0.12
LRTM1-201ENST00000273286 USP21Q9UK80 565 aa14.28□□□□□ -0.12
LRTM1-201ENST00000273286 BRPF1P55201 1214 aaPredicted RBP14.27□□□□□ -0.12
LRTM1-201ENST00000273286 EPS8L1Q8TE68 723 aa14.27□□□□□ -0.12
LRTM1-201ENST00000273286 MYOM2P54296 1465 aa14.27□□□□□ -0.13
LRTM1-201ENST00000273286 PXDNQ92626 1479 aa14.27□□□□□ -0.13
LRTM1-201ENST00000273286 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
LRTM1-201ENST00000273286 YTHDC2Q9H6S0 1430 aaKnown RBP14.26□□□□□ -0.13
LRTM1-201ENST00000273286 KIF1AQ12756 1690 aa14.25□□□□□ -0.13
LRTM1-201ENST00000273286 FOXO3O43524 673 aa14.25□□□□□ -0.13
LRTM1-201ENST00000273286 ZBTB33Q86T24 672 aa14.25□□□□□ -0.13
LRTM1-201ENST00000273286 SLC10A4Q96EP9 437 aa14.25□□□□□ -0.13
LRTM1-201ENST00000273286 STK26Q9P289 416 aa14.25□□□□□ -0.13
LRTM1-201ENST00000273286 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
LRTM1-201ENST00000273286 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
LRTM1-201ENST00000273286 WAPLQ7Z5K2 1190 aa14.24□□□□□ -0.13
LRTM1-201ENST00000273286 CCDC116Q8IYX3 515 aa14.24□□□□□ -0.13
LRTM1-201ENST00000273286 ATRNO75882 1429 aa14.23□□□□□ -0.13
LRTM1-201ENST00000273286 FMN2Q9NZ56 1722 aa14.23□□□□□ -0.13
LRTM1-201ENST00000273286 NRXN1Q9ULB1 1477 aa14.23□□□□□ -0.13
LRTM1-201ENST00000273286 PTK2Q05397 1052 aa14.23□□□□□ -0.13
LRTM1-201ENST00000273286 PNMA1Q8ND90 353 aa14.23□□□□□ -0.13
LRTM1-201ENST00000273286 C14orf93Q9H972 538 aaKnown RBP14.23□□□□□ -0.13
LRTM1-201ENST00000273286 MARF1Q9Y4F3 1742 aaKnown RBP14.22□□□□□ -0.13
LRTM1-201ENST00000273286 C6orf118Q5T5N4 469 aa14.22□□□□□ -0.13
LRTM1-201ENST00000273286 TMEM132EQ6IEE7 984 aa14.22□□□□□ -0.13
LRTM1-201ENST00000273286 OCSTAMPQ9BR26 566 aa14.22□□□□□ -0.13
LRTM1-201ENST00000273286 EMILIN1Q9Y6C2 1016 aa14.22□□□□□ -0.13
LRTM1-201ENST00000273286 CCDC125Q86Z20 511 aa14.21□□□□□ -0.13
LRTM1-201ENST00000273286 MEIOBQ8N635 442 aa14.21□□□□□ -0.13
LRTM1-201ENST00000273286 SPATA31A3Q5VYP0 1347 aa14.21□□□□□ -0.14
LRTM1-201ENST00000273286 PSME1Q06323 249 aa14.2□□□□□ -0.14
LRTM1-201ENST00000273286 NXF1Q9UBU9 619 aaKnown RBP14.2□□□□□ -0.14
LRTM1-201ENST00000273286 CDV3Q9UKY7 258 aaKnown RBP14.2□□□□□ -0.14
LRTM1-201ENST00000273286 GPSM3Q9Y4H4 160 aa14.2□□□□□ -0.14
LRTM1-201ENST00000273286 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.2□□□□□ -0.14
LRTM1-201ENST00000273286 PLEKHH1Q9ULM0 1364 aa14.2□□□□□ -0.14
LRTM1-201ENST00000273286 BCL9LQ86UU0 1499 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms