RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NSFL1CQ9UNZ2 370 aaKnown RBP19.35■□□□□ 0.69
MAP1LC3B-201ENST00000268607 RNF214Q8ND24 703 aa19.34■□□□□ 0.69
MAP1LC3B-201ENST00000268607 LRSAM1Q6UWE0 723 aa19.34■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CCDC39Q9UFE4 941 aa19.34■□□□□ 0.69
MAP1LC3B-201ENST00000268607 MCM5P33992 734 aa19.33■□□□□ 0.69
MAP1LC3B-201ENST00000268607 PHAXQ9H814 394 aaKnown RBP19.33■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CCDC9Q9Y3X0 531 aaKnown RBP19.33■□□□□ 0.69
MAP1LC3B-201ENST00000268607 A0A0G2JS52 829 aa19.33■□□□□ 0.68
MAP1LC3B-201ENST00000268607 ZDHHC9Q9Y397 364 aa19.33■□□□□ 0.68
MAP1LC3B-201ENST00000268607 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
MAP1LC3B-201ENST00000268607 SPG7Q9UQ90 795 aa19.32■□□□□ 0.68
MAP1LC3B-201ENST00000268607 CEMIPQ8WUJ3 1361 aa19.32■□□□□ 0.68
MAP1LC3B-201ENST00000268607 FOXD4L5Q5VV16 416 aaPredicted RBP19.32■□□□□ 0.68
MAP1LC3B-201ENST00000268607 FOXD4L4Q8WXT5 416 aaPredicted RBP19.32■□□□□ 0.68
MAP1LC3B-201ENST00000268607 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
MAP1LC3B-201ENST00000268607 USP26Q9BXU7 913 aa19.31■□□□□ 0.68
MAP1LC3B-201ENST00000268607 CCT4P50991 539 aaKnown RBP19.31■□□□□ 0.68
MAP1LC3B-201ENST00000268607 IFNL2Q8IZJ0 200 aa19.31■□□□□ 0.68
MAP1LC3B-201ENST00000268607 C8orf37Q96NL8 207 aa19.31■□□□□ 0.68
MAP1LC3B-201ENST00000268607 EIF4A1P60842 406 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3B-201ENST00000268607 ZCRB1Q8TBF4 217 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3B-201ENST00000268607 CWC22Q9HCG8 908 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3B-201ENST00000268607 EXOC6BQ9Y2D4 811 aa19.3■□□□□ 0.68
MAP1LC3B-201ENST00000268607 IL2RBP14784 551 aa19.3■□□□□ 0.68
MAP1LC3B-201ENST00000268607 ZNF710Q8N1W2 664 aa19.29■□□□□ 0.68
MAP1LC3B-201ENST00000268607 KDM6AO15550 1401 aaPredicted RBP19.29■□□□□ 0.68
MAP1LC3B-201ENST00000268607 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
MAP1LC3B-201ENST00000268607 ABCA3Q99758 1704 aa19.29■□□□□ 0.68
MAP1LC3B-201ENST00000268607 FAM208AQ9UK61 1670 aaKnown RBP19.29■□□□□ 0.68
MAP1LC3B-201ENST00000268607 PTMAP06454 111 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 CARD10Q9BWT7 1032 aa19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 GTPBP4Q9BZE4 634 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 PHLPP1O60346 1717 aa19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 KIF20AO95235 890 aa19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 TSHZ3Q63HK5 1081 aa19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 CERKQ8TCT0 537 aa19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 GNAI2P04899 355 aa19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 DNTTIP2Q5QJE6 756 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 MYRIPQ8NFW9 859 aa19.28■□□□□ 0.68
MAP1LC3B-201ENST00000268607 PNMA6EA0A0J9YXQ4 647 aa19.27■□□□□ 0.68
MAP1LC3B-201ENST00000268607 ATP2B3Q16720 1220 aa19.27■□□□□ 0.68
MAP1LC3B-201ENST00000268607 TTC22Q5TAA0 569 aa19.27■□□□□ 0.68
MAP1LC3B-201ENST00000268607 PROSER3Q2NL68 480 aa19.27■□□□□ 0.67
MAP1LC3B-201ENST00000268607 CHPF2Q9P2E5 772 aa19.27■□□□□ 0.67
MAP1LC3B-201ENST00000268607 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
MAP1LC3B-201ENST00000268607 ST18O60284 1047 aa19.26■□□□□ 0.67
MAP1LC3B-201ENST00000268607 MPNDQ8N594 471 aa19.26■□□□□ 0.67
MAP1LC3B-201ENST00000268607 SLC52A2Q9HAB3 445 aa19.26■□□□□ 0.67
MAP1LC3B-201ENST00000268607 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
MAP1LC3B-201ENST00000268607 HMMRO75330 724 aa19.26■□□□□ 0.67
MAP1LC3B-201ENST00000268607 LRRFIP2Q9Y608 721 aaKnown RBP19.26■□□□□ 0.67
MAP1LC3B-201ENST00000268607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.26■□□□□ 0.675e-7■■□□□ 13.6
MAP1LC3B-201ENST00000268607 CABP4P57796 275 aa19.25■□□□□ 0.67
MAP1LC3B-201ENST00000268607 SYTL4Q96C24 671 aaPredicted RBP19.25■□□□□ 0.67
MAP1LC3B-201ENST00000268607 LMO7Q8WWI1 1683 aa19.25■□□□□ 0.67
MAP1LC3B-201ENST00000268607 KIAA2012Q0VF49 1180 aa19.25■□□□□ 0.67
MAP1LC3B-201ENST00000268607 ZNF496Q96IT1 587 aaPredicted RBP19.25■□□□□ 0.67
MAP1LC3B-201ENST00000268607 NAP1L2Q9ULW6 460 aaPredicted RBP19.25■□□□□ 0.67
MAP1LC3B-201ENST00000268607 SDSP20132 328 aa19.24■□□□□ 0.67
MAP1LC3B-201ENST00000268607 HSPA1LP34931 641 aa19.24■□□□□ 0.67
MAP1LC3B-201ENST00000268607 NGLY1Q96IV0 654 aa19.24■□□□□ 0.67
MAP1LC3B-201ENST00000268607 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
MAP1LC3B-201ENST00000268607 LETM1O95202 739 aaPredicted RBP19.23■□□□□ 0.67
MAP1LC3B-201ENST00000268607 AIMP1Q12904 312 aaKnown RBP19.23■□□□□ 0.67
MAP1LC3B-201ENST00000268607 USP44Q9H0E7 712 aa19.23■□□□□ 0.67
MAP1LC3B-201ENST00000268607 COL16A1Q07092 1604 aaPredicted RBP19.23■□□□□ 0.67
MAP1LC3B-201ENST00000268607 MYL6BP14649 208 aa19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 DCAF5Q96JK2 942 aa19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 TMEM51Q9NW97 253 aa19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 AHDC1Q5TGY3 1603 aaPredicted RBP19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 SPDYE4A6NLX3 237 aa19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 IGSF3O75054 1194 aa19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 ZNF830Q96NB3 372 aaPredicted RBP19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
MAP1LC3B-201ENST00000268607 LRRC37A3O60309 1634 aa19.21■□□□□ 0.67
MAP1LC3B-201ENST00000268607 GIGYF1O75420 1035 aaPredicted RBP19.21■□□□□ 0.67
MAP1LC3B-201ENST00000268607 GNAI3P08754 354 aa19.21■□□□□ 0.67
MAP1LC3B-201ENST00000268607 FAM182BQ5T319 152 aa19.21■□□□□ 0.67
MAP1LC3B-201ENST00000268607 TSPY26PQ9H489 355 aa19.21■□□□□ 0.67
MAP1LC3B-201ENST00000268607 OVOS2A0A0G2JMS6 1433 aa19.21■□□□□ 0.67
MAP1LC3B-201ENST00000268607 PI4KAP2A4QPH2 592 aa19.2■□□□□ 0.66
MAP1LC3B-201ENST00000268607 PI4KAP1Q8N8J0 262 aa19.2■□□□□ 0.66
MAP1LC3B-201ENST00000268607 MBD3O95983 291 aa19.2■□□□□ 0.66
MAP1LC3B-201ENST00000268607 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
MAP1LC3B-201ENST00000268607 GOLGB1Q14789 3259 aaKnown RBP19.2■□□□□ 0.66
MAP1LC3B-201ENST00000268607 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
MAP1LC3B-201ENST00000268607 PCDH11XQ9BZA7 1347 aa19.19■□□□□ 0.66
MAP1LC3B-201ENST00000268607 PCDH11YQ9BZA8 1340 aa19.19■□□□□ 0.66
MAP1LC3B-201ENST00000268607 ACSBG1Q96GR2 724 aa19.19■□□□□ 0.66
MAP1LC3B-201ENST00000268607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.19■□□□□ 0.66
MAP1LC3B-201ENST00000268607 PDE1AP54750 535 aa19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 ATP8B2P98198 1209 aa19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 NBPF7P0C2Y1 421 aaPredicted RBP19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 IL1RAPL2Q9NP60 686 aa19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 FOXD4L6Q3SYB3 417 aaPredicted RBP19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 FOXD4L3Q6VB84 417 aaPredicted RBP19.18■□□□□ 0.66
MAP1LC3B-201ENST00000268607 VGLL3A8MV65 326 aa19.17■□□□□ 0.66
MAP1LC3B-201ENST00000268607 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms