RNA–Protein interactions for RNA: ENST00000267101.7

ERBB3-201, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB3, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-201ENST00000267101 TRIM5Q9C035 493 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 RTL1A6NKG5 1358 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 PDE4CQ08493 712 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 ZNF396Q96N95 335 aaPredicted RBP13.18□□□□□ -0.3
ERBB3-201ENST00000267101 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 BRPF3Q9ULD4 1205 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 RFC4P35249 363 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 IFIT1P09914 478 aaKnown RBP13.18□□□□□ -0.3
ERBB3-201ENST00000267101 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
ERBB3-201ENST00000267101 SLC5A1P13866 664 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 STK38Q15208 465 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 GPS2Q13227 327 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
ERBB3-201ENST00000267101 MEIS3Q99687 375 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 RRP12Q5JTH9 1297 aaKnown RBP13.17□□□□□ -0.3
ERBB3-201ENST00000267101 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
ERBB3-201ENST00000267101 SLC52A2Q9HAB3 445 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 KRT85P78386 507 aa13.17□□□□□ -0.3
ERBB3-201ENST00000267101 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-201ENST00000267101 CCDC8Q9H0W5 538 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-201ENST00000267101 STK3Q13188 491 aa13.16□□□□□ -0.3
ERBB3-201ENST00000267101 CCDC173Q0VFZ6 552 aa13.16□□□□□ -0.3
ERBB3-201ENST00000267101 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
ERBB3-201ENST00000267101 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
ERBB3-201ENST00000267101 KDM4AO75164 1064 aa13.16□□□□□ -0.3
ERBB3-201ENST00000267101 LGR6Q9HBX8 967 aa13.16□□□□□ -0.3
ERBB3-201ENST00000267101 RIMS1Q86UR5 1692 aaKnown RBP13.16□□□□□ -0.3
ERBB3-201ENST00000267101 PIP4K2AP48426 406 aaPredicted RBP13.15□□□□□ -0.3
ERBB3-201ENST00000267101 DEPDC5O75140 1603 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 CHL1O00533 1208 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 CEBPZQ03701 1054 aaKnown RBP13.15□□□□□ -0.3
ERBB3-201ENST00000267101 BOLA2Q9H3K6 86 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 TULP4Q9NRJ4 1543 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 JMYQ8N9B5 988 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 CTNNA3Q9UI47 895 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 GRM8O00222 908 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 NUCB1Q02818 461 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 KRT32Q14532 448 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 JARID2Q92833 1246 aaPredicted RBP13.15□□□□□ -0.3
ERBB3-201ENST00000267101 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
ERBB3-201ENST00000267101 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.31
ERBB3-201ENST00000267101 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
ERBB3-201ENST00000267101 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 IDH1O75874 414 aaKnown RBP13.14□□□□□ -0.31
ERBB3-201ENST00000267101 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
ERBB3-201ENST00000267101 TNNQ9UQP3 1299 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 R3HCC1Q9Y3T6 440 aaKnown RBP13.14□□□□□ -0.31
ERBB3-201ENST00000267101 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 HOXB7P09629 217 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 ANKRD44Q8N8A2 993 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
ERBB3-201ENST00000267101 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
ERBB3-201ENST00000267101 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
ERBB3-201ENST00000267101 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
ERBB3-201ENST00000267101 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
ERBB3-201ENST00000267101 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
ERBB3-201ENST00000267101 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
ERBB3-201ENST00000267101 ST5P78524 1137 aa13.13□□□□□ -0.31
ERBB3-201ENST00000267101 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
ERBB3-201ENST00000267101 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
ERBB3-201ENST00000267101 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
ERBB3-201ENST00000267101 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 ME1P48163 572 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 UPF3BQ9BZI7 483 aaKnown RBP13.12□□□□□ -0.31
ERBB3-201ENST00000267101 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
ERBB3-201ENST00000267101 RLBP1P12271 317 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 TDO2P48775 406 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 RBM5P52756 815 aaKnown RBP eCLIP13.12□□□□□ -0.314e-6■■□□□ 11.8
ERBB3-201ENST00000267101 NBPF5PQ86XG9 351 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-201ENST00000267101 PDILTQ8N807 584 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
ERBB3-201ENST00000267101 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
ERBB3-201ENST00000267101 LDHAL6AQ6ZMR3 332 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
ERBB3-201ENST00000267101 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
ERBB3-201ENST00000267101 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 DDX21Q9NR30 783 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERBB3-201ENST00000267101 ECHDC1Q9NTX5 307 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
ERBB3-201ENST00000267101 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 IMMTQ16891 758 aaKnown RBP13.11□□□□□ -0.31
ERBB3-201ENST00000267101 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
ERBB3-201ENST00000267101 KIAA0232Q92628 1395 aa13.1□□□□□ -0.31
ERBB3-201ENST00000267101 SMC2O95347 1197 aa13.1□□□□□ -0.31
ERBB3-201ENST00000267101 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms