RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 BOLA2Q9H3K6 86 aa9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 BICC1Q9H694 974 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 TLR7Q9NYK1 1049 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 CNPY2Q9Y2B0 182 aa9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 NDUFB9Q9Y6M9 179 aa9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 FIBPO43427 364 aa9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 GLRX3O76003 335 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 COL9A3Q14050 684 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 LRSAM1Q6UWE0 723 aa9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 AEBP2Q6ZN18 517 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 PPP1R9BQ96SB3 815 aa9.07□□□□□ -0.96
GAPVD1-201ENST00000265956 PXDNQ92626 1479 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 LTN1O94822 1766 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 RGPD2P0DJD1 1756 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 HSP90AB4PQ58FF6 505 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 ARHGEF25Q86VW2 580 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 NECAB1Q8N987 351 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 NFATC2IPQ8NCF5 419 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 CABLES1Q8TDN4 633 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 EDC3Q96F86 508 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 INTS4Q96HW7 963 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 ECHDC1Q9NTX5 307 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 FER1L4A9Z1Z3 1794 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 PLCB2Q00722 1185 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 G3BP1Q13283 466 aaKnown RBP eCLIP9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 AMOTQ4VCS5 1084 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 ZSCAN30Q86W11 494 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 SMC3Q9UQE7 1217 aa9.06□□□□□ -0.96
GAPVD1-201ENST00000265956 AOX1Q06278 1338 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 GRM8O00222 908 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 MBD3O95983 291 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 CSB-PGBD3P0DP91 1061 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 SYT1P21579 422 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 KRT28Q7Z3Y7 464 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 EAF2Q96CJ1 260 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 LIMCH1Q9UPQ0 1083 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 TCHHQ07283 1943 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 MARF1Q9Y4F3 1742 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 VPS37CA5D8V6 355 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 SASH1O94885 1247 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 CHRNA2Q15822 529 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 PROSER2Q86WR7 435 aaPredicted RBP9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 GPATCH3Q96I76 525 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 KAZALD1Q96I82 304 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 PDRG1Q9NUG6 133 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 LRRC37A3O60309 1634 aa9.05□□□□□ -0.96
GAPVD1-201ENST00000265956 STX6O43752 255 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 CHGBP05060 677 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 PTMAP06454 111 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 HOXB7P09629 217 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 COPS6Q7L5N1 327 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 XAGE3Q8WTP9 111 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 MYD88Q99836 296 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 CACNA1FO60840 1977 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 ATP5J2-PTCD1G3V325 749 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 PTCD1O75127 700 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 GJB2P29033 226 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 STK3Q13188 491 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 NMIQ13287 307 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 RUFY2Q8WXA3 655 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 TTC14Q96N46 770 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 FSD1Q9BTV5 496 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 TSPY26PQ9H489 355 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 PXDNLA1KZ92 1463 aa9.04□□□□□ -0.96
GAPVD1-201ENST00000265956 IGKV5-2P06315 115 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 EPHA10Q5JZY3 1008 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 LINS1Q8NG48 757 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 HYPKQ9NX55 129 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 RBM8AQ9Y5S9 174 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 TAF6LQ9Y6J9 622 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 TTC41PQ6P2S7 1318 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 RPAP1Q9BWH6 1393 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 ALDH1L1O75891 902 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 DDX58O95786 925 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 ZSCAN22P10073 491 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 DNM1Q05193 864 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 FAM173BQ6P4H8 233 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 ZNF790Q6PG37 636 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 USP16Q9Y5T5 823 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 CYP46A1Q9Y6A2 500 aa9.03□□□□□ -0.96
GAPVD1-201ENST00000265956 A0A0D9SFI3 127 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 ZKSCAN1P17029 563 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 NEXNQ0ZGT2 675 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 PDIA6Q15084 440 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 EVI5LQ96CN4 794 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 ZNF496Q96IT1 587 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 ZNF830Q96NB3 372 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 CHMP4AQ9BY43 222 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 DDX21Q9NR30 783 aaKnown RBP eCLIP9.02□□□□□ -0.973e-6■□□□□ 8.6
GAPVD1-201ENST00000265956 NFAT5O94916 1531 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 ME3Q16798 604 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 UBE3BQ7Z3V4 1068 aa9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 SYAP1Q96A49 352 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-201ENST00000265956 TUBGCP6Q96RT7 1819 aa9.01□□□□□ -0.97
GAPVD1-201ENST00000265956 HCLS1P14317 486 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms