RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 WWC2Q6AWC2 1192 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 NSD2O96028 1365 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 BRPF1P55201 1214 aaPredicted RBP6.57□□□□□ -1.36
VCAN-201ENST00000265077 NLRP6P59044 892 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 ZKSCAN8Q15776 578 aaPredicted RBP6.57□□□□□ -1.36
VCAN-201ENST00000265077 AACSQ86V21 672 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 KIF3CO14782 793 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 GLRX3O76003 335 aaKnown RBP6.57□□□□□ -1.36
VCAN-201ENST00000265077 CALR3Q96L12 384 aaKnown RBP6.57□□□□□ -1.36
VCAN-201ENST00000265077 TOPBP1Q92547 1522 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 ZBTB22O15209 634 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 LIMCH1Q9UPQ0 1083 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 NESP48681 1621 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 SEPT6Q14141 434 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 ABTB2Q8N961 1025 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 INPP5BP32019 993 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 TMEM57Q8N5G2 664 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 TMEM51Q9NW97 253 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 ADGBQ8N7X0 1667 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 ZNF692Q9BU19 519 aaPredicted RBP6.57□□□□□ -1.36
VCAN-201ENST00000265077 KAT6AQ92794 2004 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 KIF1BO60333 1816 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 VPS18Q9P253 973 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 CLIP2Q9UDT6 1046 aa6.57□□□□□ -1.36
VCAN-201ENST00000265077 FGFR1OPO95684 399 aaKnown RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 ZFYVE27Q5T4F4 411 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 TTC39AQ5SRH9 613 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 CFAP70Q5T0N1 1121 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 B4GALNT4Q76KP1 1039 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 SLC12A5Q9H2X9 1139 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 RRP15Q9Y3B9 282 aaKnown RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 PTPRCP08575 1304 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 URI1O94763 535 aaPredicted RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 SULT6B1Q6IMI4 303 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 TTC12Q9H892 705 aaPredicted RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 RALGAPBQ86X10 1494 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 MX1P20591 662 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 PRIM1P49642 420 aaKnown RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 MCM6Q14566 821 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 ASXL1Q8IXJ9 1541 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 RAD21O60216 631 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 NBPF3Q9H094 633 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 GOPCQ9HD26 462 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 RAI14Q9P0K7 980 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.56□□□□□ -1.36
VCAN-201ENST00000265077 SRGAP3O43295 1099 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 KIF5BP33176 963 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 E2F4Q16254 413 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 SH2D4BQ5SQS7 431 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 CWC27Q6UX04 472 aaKnown RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 IRX1P78414 480 aaPredicted RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 MMS22LQ6ZRQ5 1243 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 CCDC121Q6ZUS5 278 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 ATP2B1P20020 1258 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 CDK19Q9BWU1 502 aa6.56□□□□□ -1.36
VCAN-201ENST00000265077 RPRD2Q5VT52 1461 aaKnown RBP6.56□□□□□ -1.36
VCAN-201ENST00000265077 RARSP54136 660 aaKnown RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 WHAMMP3Q1A5X7 153 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 CCDC150Q8NCX0 1101 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 TACO1Q9BSH4 297 aaKnown RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 UBAC1Q9BSL1 405 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 CCDC57Q2TAC2 916 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 TRMT1Q9NXH9 659 aaKnown RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 UBE2HP62256 183 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 RAB3GAP1Q15042 981 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 SPATA24Q86W54 205 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 SLC20A2Q08357 652 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 TAF4BQ92750 862 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.55□□□□□ -1.36
VCAN-201ENST00000265077 RTEL1-TNFRSF6BF6WH68 1400 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 RBM27Q9P2N5 1060 aaKnown RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 TOP1P11387 765 aaKnown RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 TMEM132EQ6IEE7 984 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 CXorf56Q9H5V9 222 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 DDX19AQ9NUU7 478 aaKnown RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 TUBB4BP68371 445 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 NEDD9Q14511 834 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 C8orf34Q49A92 452 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 NEK11Q8NG66 645 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 MRFAP1L1Q96HT8 127 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 PRAM1Q96QH2 718 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 PYM1Q9BRP8 204 aaKnown RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 HMG20BQ9P0W2 317 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 ZSCAN20P17040 1043 aaPredicted RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 SPA17Q15506 151 aa6.55□□□□□ -1.36
VCAN-201ENST00000265077 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
VCAN-201ENST00000265077 KRT18P05783 430 aaKnown RBP6.54□□□□□ -1.36
VCAN-201ENST00000265077 TERF2Q15554 542 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 HDXQ7Z353 690 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 TTC36A6NLP5 189 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 STK3Q13188 491 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 TSC1Q92574 1164 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 NAA15Q9BXJ9 866 aaKnown RBP6.54□□□□□ -1.36
VCAN-201ENST00000265077 FYB1O15117 783 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 KIF4AO95239 1232 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 FAM114A1Q8IWE2 563 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 EHBP1Q8NDI1 1231 aa6.54□□□□□ -1.36
VCAN-201ENST00000265077 ARHGAP25P42331 645 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms