RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
NUP54-201ENST00000264883 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
NUP54-201ENST00000264883 GIMAP6Q6P9H5 292 aa15.64■□□□□ 0.09
NUP54-201ENST00000264883 CNPY2Q9Y2B0 182 aa15.64■□□□□ 0.09
NUP54-201ENST00000264883 USP54Q70EL1 1684 aa15.63■□□□□ 0.09
NUP54-201ENST00000264883 MEIS3Q99687 375 aa15.63■□□□□ 0.09
NUP54-201ENST00000264883 SRCIN1Q9C0H9 1055 aa15.63■□□□□ 0.09
NUP54-201ENST00000264883 FAM53CQ9NYF3 392 aa15.63■□□□□ 0.09
NUP54-201ENST00000264883 RGPD1P0DJD0 1748 aa15.63■□□□□ 0.09
NUP54-201ENST00000264883 AEBP2Q6ZN18 517 aaPredicted RBP15.63■□□□□ 0.09
NUP54-201ENST00000264883 CREBRFQ8IUR6 639 aa15.63■□□□□ 0.09
NUP54-201ENST00000264883 AOX1Q06278 1338 aa15.63■□□□□ 0.09
NUP54-201ENST00000264883 KMT5BQ4FZB7 885 aa15.62■□□□□ 0.09
NUP54-201ENST00000264883 RPAP1Q9BWH6 1393 aaPredicted RBP15.62■□□□□ 0.09
NUP54-201ENST00000264883 PROSER2Q86WR7 435 aaPredicted RBP15.62■□□□□ 0.09
NUP54-201ENST00000264883 ESYT1Q9BSJ8 1104 aa15.62■□□□□ 0.09
NUP54-201ENST00000264883 MARF1Q9Y4F3 1742 aaKnown RBP15.61■□□□□ 0.09
NUP54-201ENST00000264883 PHF8Q9UPP1 1060 aa15.61■□□□□ 0.09
NUP54-201ENST00000264883 SALL3Q9BXA9 1300 aa15.61■□□□□ 0.09
NUP54-201ENST00000264883 CRB1P82279 1406 aa15.61■□□□□ 0.09
NUP54-201ENST00000264883 GNAI2P04899 355 aa15.61■□□□□ 0.09
NUP54-201ENST00000264883 DCTN1Q14203 1278 aa15.61■□□□□ 0.09
NUP54-201ENST00000264883 CCDC186Q7Z3E2 898 aa15.61■□□□□ 0.09
NUP54-201ENST00000264883 SOS1Q07889 1333 aaPredicted RBP15.6■□□□□ 0.09
NUP54-201ENST00000264883 LRMPQ12912 555 aa15.6■□□□□ 0.09
NUP54-201ENST00000264883 TRERF1Q96PN7 1200 aa15.6■□□□□ 0.09
NUP54-201ENST00000264883 GNAI3P08754 354 aa15.6■□□□□ 0.09
NUP54-201ENST00000264883 EIF4A2Q14240 407 aaKnown RBP15.6■□□□□ 0.09
NUP54-201ENST00000264883 RRS1Q15050 365 aaKnown RBP15.6■□□□□ 0.09
NUP54-201ENST00000264883 TPD52L1Q16890 204 aaPredicted RBP15.6■□□□□ 0.09
NUP54-201ENST00000264883 N4BP2Q86UW6 1770 aaPredicted RBP15.59■□□□□ 0.09
NUP54-201ENST00000264883 APBB1O00213 710 aa15.59■□□□□ 0.09
NUP54-201ENST00000264883 LRRCC1Q9C099 1032 aa15.59■□□□□ 0.09
NUP54-201ENST00000264883 SLC4A2P04920 1241 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 CCDC192P0DO97 292 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 SULT6B1Q6IMI4 303 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 DRC7Q8IY82 874 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 ZNF592Q92610 1267 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 C19orf44Q9H6X5 657 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 STAP2Q9UGK3 403 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 FEZ2Q9UHY8 353 aaPredicted RBP15.58■□□□□ 0.09
NUP54-201ENST00000264883 PALD1Q9ULE6 856 aa15.58■□□□□ 0.09
NUP54-201ENST00000264883 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.58■□□□□ 0.09
NUP54-201ENST00000264883 CYP2C19P33261 490 aa15.58■□□□□ 0.08
NUP54-201ENST00000264883 HNRNPH2P55795 449 aaKnown RBP15.58■□□□□ 0.08
NUP54-201ENST00000264883 RBM6P78332 1123 aaKnown RBP15.58■□□□□ 0.08
NUP54-201ENST00000264883 CEP135Q66GS9 1140 aa15.58■□□□□ 0.08
NUP54-201ENST00000264883 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
NUP54-201ENST00000264883 CERS3Q8IU89 383 aa15.58■□□□□ 0.08
NUP54-201ENST00000264883 NOL10Q9BSC4 688 aaKnown RBP15.58■□□□□ 0.08
NUP54-201ENST00000264883 ST7Q9NRC1 585 aa15.58■□□□□ 0.08
NUP54-201ENST00000264883 PEAK1Q9H792 1746 aa15.58■□□□□ 0.08
NUP54-201ENST00000264883 TMEM94Q12767 1356 aa15.58■□□□□ 0.08
NUP54-201ENST00000264883 FIBPO43427 364 aa15.57■□□□□ 0.08
NUP54-201ENST00000264883 PXDNLA1KZ92 1463 aa15.57■□□□□ 0.08
NUP54-201ENST00000264883 DCCP43146 1447 aa15.57■□□□□ 0.08
NUP54-201ENST00000264883 ZSCAN22P10073 491 aaPredicted RBP15.57■□□□□ 0.08
NUP54-201ENST00000264883 ZSCAN25Q6NSZ9 544 aa15.57■□□□□ 0.08
NUP54-201ENST00000264883 FBXO38Q6PIJ6 1188 aa15.57■□□□□ 0.08
NUP54-201ENST00000264883 KIF1BPQ96EK5 621 aa15.56■□□□□ 0.08
NUP54-201ENST00000264883 ZNF215Q9UL58 517 aaPredicted RBP15.56■□□□□ 0.08
NUP54-201ENST00000264883 C1orf167Q5SNV9 1468 aa15.56■□□□□ 0.08
NUP54-201ENST00000264883 CHMLP26374 656 aa15.56■□□□□ 0.08
NUP54-201ENST00000264883 FAM200AQ8TCP9 573 aa15.56■□□□□ 0.08
NUP54-201ENST00000264883 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.56■□□□□ 0.08
NUP54-201ENST00000264883 V9GYY5 206 aaPredicted RBP15.56■□□□□ 0.08
NUP54-201ENST00000264883 SLFNL1Q499Z3 407 aa15.55■□□□□ 0.08
NUP54-201ENST00000264883 ESCO1Q5FWF5 840 aa15.55■□□□□ 0.08
NUP54-201ENST00000264883 STK31Q9BXU1 1019 aa15.55■□□□□ 0.08
NUP54-201ENST00000264883 NRBP1Q9UHY1 535 aa15.55■□□□□ 0.08
NUP54-201ENST00000264883 MCM10Q7L590 875 aa15.55■□□□□ 0.08
NUP54-201ENST00000264883 AEBP1Q8IUX7 1158 aa15.55■□□□□ 0.08
NUP54-201ENST00000264883 RTF1Q92541 710 aaKnown RBP15.55■□□□□ 0.08
NUP54-201ENST00000264883 UPF3BQ9BZI7 483 aaKnown RBP15.55■□□□□ 0.08
NUP54-201ENST00000264883 XIRP1Q702N8 1843 aaKnown RBP15.55■□□□□ 0.08
NUP54-201ENST00000264883 HTATSF1O43719 755 aaKnown RBP15.54■□□□□ 0.08
NUP54-201ENST00000264883 ATP8B2P98198 1209 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 RAD51AP2Q09MP3 1159 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 KRT24Q2M2I5 525 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 ATP6V1DQ9Y5K8 247 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 KIF1AQ12756 1690 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 FAM208AQ9UK61 1670 aaKnown RBP15.54■□□□□ 0.08
NUP54-201ENST00000264883 ELF2Q15723 593 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 ERO1AQ96HE7 468 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 ANO2Q9NQ90 1003 aa15.54■□□□□ 0.08
NUP54-201ENST00000264883 MST1RQ04912 1400 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 BMS1Q14692 1282 aaKnown RBP15.53■□□□□ 0.08
NUP54-201ENST00000264883 LUZP1Q86V48 1076 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 TEX2Q8IWB9 1127 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 RGS22Q8NE09 1264 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 LRRC37A3O60309 1634 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 STX6O43752 255 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 F13A1P00488 732 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 TNNT3P45378 269 aaPredicted RBP15.53■□□□□ 0.08
NUP54-201ENST00000264883 ZFP91Q96JP5 570 aaPredicted RBP15.53■□□□□ 0.08
NUP54-201ENST00000264883 TSPYL4Q9UJ04 414 aa15.53■□□□□ 0.08
NUP54-201ENST00000264883 MAP3K19Q56UN5 1328 aa15.52■□□□□ 0.08
NUP54-201ENST00000264883 NLRP6P59044 892 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms