RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 DACT1Q9NYF0 836 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 CACNA2D4Q7Z3S7 1137 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 NUTM1Q86Y26 1132 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 EFCC1Q9HA90 598 aa20.72■□□□□ 0.91
ITGA6-201ENST00000264107 ZNF644Q9H582 1327 aaPredicted RBP20.71■□□□□ 0.91
ITGA6-201ENST00000264107 SEC24BO95487 1268 aa20.71■□□□□ 0.91
ITGA6-201ENST00000264107 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
ITGA6-201ENST00000264107 EID1Q9Y6B2 187 aa20.71■□□□□ 0.91
ITGA6-201ENST00000264107 RBM42Q9BTD8 480 aaKnown RBP20.71■□□□□ 0.91
ITGA6-201ENST00000264107 CEP131Q9UPN4 1083 aa20.71■□□□□ 0.91
ITGA6-201ENST00000264107 MTMR7Q9Y216 660 aa20.71■□□□□ 0.91
ITGA6-201ENST00000264107 LMNTD2Q8IXW0 634 aa20.71■□□□□ 0.91
ITGA6-201ENST00000264107 TTC5Q8N0Z6 440 aa20.7■□□□□ 0.9
ITGA6-201ENST00000264107 ARFGAP2Q8N6H7 521 aa20.7■□□□□ 0.9
ITGA6-201ENST00000264107 FEZ2Q9UHY8 353 aaPredicted RBP20.7■□□□□ 0.9
ITGA6-201ENST00000264107 FYB1O15117 783 aa20.7■□□□□ 0.9
ITGA6-201ENST00000264107 LACTBP83111 547 aaPredicted RBP20.7■□□□□ 0.9
ITGA6-201ENST00000264107 CCDC172P0C7W6 258 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 PPP1R9BQ96SB3 815 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 PCK1P35558 622 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 MIPOL1Q8TD10 442 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 SSH1Q8WYL5 1049 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 AACSQ86V21 672 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
ITGA6-201ENST00000264107 ZHX3Q9H4I2 956 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 LRRC9Q6ZRR7 1453 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 ARHGAP25P42331 645 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 CCDC129Q6ZRS4 1044 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 FAM114A1Q8IWE2 563 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
ITGA6-201ENST00000264107 ZFYP08048 801 aaPredicted RBP20.68■□□□□ 0.9
ITGA6-201ENST00000264107 RNF168Q8IYW5 571 aaPredicted RBP20.68■□□□□ 0.9
ITGA6-201ENST00000264107 VGFO15240 615 aaPredicted RBP20.68■□□□□ 0.9
ITGA6-201ENST00000264107 TDRD12Q587J7 1177 aaKnown RBP20.68■□□□□ 0.9
ITGA6-201ENST00000264107 C8orf76Q96K31 380 aa20.68■□□□□ 0.9
ITGA6-201ENST00000264107 TBC1D2BQ9UPU7 963 aa20.68■□□□□ 0.9
ITGA6-201ENST00000264107 KARSQ15046 597 aaKnown RBP20.67■□□□□ 0.9
ITGA6-201ENST00000264107 STAMBPO95630 424 aa20.67■□□□□ 0.9
ITGA6-201ENST00000264107 CCDC155Q8N6L0 562 aa20.67■□□□□ 0.9
ITGA6-201ENST00000264107 VPS37DQ86XT2 251 aa20.67■□□□□ 0.9
ITGA6-201ENST00000264107 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
ITGA6-201ENST00000264107 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
ITGA6-201ENST00000264107 WASF1Q92558 559 aa20.66■□□□□ 0.9
ITGA6-201ENST00000264107 RABEP2Q9H5N1 569 aa20.65■□□□□ 0.9
ITGA6-201ENST00000264107 PPP2R5AQ15172 486 aa20.65■□□□□ 0.9
ITGA6-201ENST00000264107 CARD6Q9BX69 1037 aa20.65■□□□□ 0.9
ITGA6-201ENST00000264107 SPATS2LQ9NUQ6 558 aaKnown RBP20.65■□□□□ 0.9
ITGA6-201ENST00000264107 SERPINA10Q9UK55 444 aa20.65■□□□□ 0.9
ITGA6-201ENST00000264107 DNM1Q05193 864 aaKnown RBP20.65■□□□□ 0.9
ITGA6-201ENST00000264107 RBBP5Q15291 538 aaKnown RBP20.65■□□□□ 0.9
ITGA6-201ENST00000264107 CCDC57Q2TAC2 916 aa20.65■□□□□ 0.9
ITGA6-201ENST00000264107 MICAL1Q8TDZ2 1067 aa20.65■□□□□ 0.9
ITGA6-201ENST00000264107 F13A1P00488 732 aa20.64■□□□□ 0.9
ITGA6-201ENST00000264107 PEX19P40855 299 aa20.64■□□□□ 0.9
ITGA6-201ENST00000264107 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.64■□□□□ 0.9
ITGA6-201ENST00000264107 TTC22Q5TAA0 569 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 LUC7L2Q9Y383 392 aaKnown RBP20.64■□□□□ 0.89
ITGA6-201ENST00000264107 G3V3G9 751 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 ZNF569Q5MCW4 686 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 DCAF8Q5TAQ9 597 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 GOLGA5Q8TBA6 731 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 PPP1R12CQ9BZL4 782 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 SAMD15Q9P1V8 674 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 LZTFL1Q9NQ48 299 aa20.64■□□□□ 0.89
ITGA6-201ENST00000264107 AQRO60306 1485 aaKnown RBP eCLIP20.63■□□□□ 0.89
ITGA6-201ENST00000264107 ATP11AP98196 1134 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 PPFIBP2Q8ND30 876 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 FAM160A1Q05DH4 1040 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.63■□□□□ 0.89
ITGA6-201ENST00000264107 GOLGA6CA6NDK9 693 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 GOLGA6DP0CG33 693 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 TRIM27P14373 513 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 SELENOSQ9BQE4 189 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 GOLGA6AQ9NYA3 693 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 CTNNA3Q9UI47 895 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 CUX1P39880 1505 aa20.63■□□□□ 0.89
ITGA6-201ENST00000264107 ZGPATQ8N5A5 531 aaKnown RBP20.63■□□□□ 0.89
ITGA6-201ENST00000264107 ZBTB12Q9Y330 459 aaPredicted RBP20.63■□□□□ 0.89
ITGA6-201ENST00000264107 NUCB1Q02818 461 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 CAPZA3Q96KX2 299 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 VPS36Q86VN1 386 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 NAP1L3Q99457 506 aaPredicted RBP20.62■□□□□ 0.89
ITGA6-201ENST00000264107 UBAC1Q9BSL1 405 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 SUDS3Q9H7L9 328 aaPredicted RBP20.62■□□□□ 0.89
ITGA6-201ENST00000264107 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
ITGA6-201ENST00000264107 TMX4Q9H1E5 349 aaPredicted RBP20.62■□□□□ 0.89
ITGA6-201ENST00000264107 KIF3CO14782 793 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 GLRX3O76003 335 aaKnown RBP20.62■□□□□ 0.89
ITGA6-201ENST00000264107 CAPN7Q9Y6W3 813 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
ITGA6-201ENST00000264107 CASKIN1Q8WXD9 1431 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 STAC3Q96MF2 364 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
ITGA6-201ENST00000264107 JRKLQ9Y4A0 524 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.61■□□□□ 0.89
ITGA6-201ENST00000264107 N4BP3O15049 544 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 HSP90AA4PQ58FG1 418 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 FSD2A1L4K1 749 aa20.61■□□□□ 0.89
ITGA6-201ENST00000264107 ZSCAN16Q9H4T2 348 aaPredicted RBP20.61■□□□□ 0.89
ITGA6-201ENST00000264107 STIM2Q9P246 746 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms